BLASTX nr result

ID: Zingiber23_contig00034497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034497
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006388707.1| hypothetical protein POPTR_0115s002502g, par...    58   1e-06
ref|XP_002302908.1| nbs-lrr resistance protein [Populus trichoca...    58   1e-06
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    57   2e-06

>ref|XP_006388707.1| hypothetical protein POPTR_0115s002502g, partial [Populus
           trichocarpa] gi|550310689|gb|ERP47621.1| hypothetical
           protein POPTR_0115s002502g, partial [Populus
           trichocarpa]
          Length = 697

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/78 (43%), Positives = 43/78 (55%)
 Frame = +2

Query: 32  EKCDDDGRHVTECTMHDLMHDLARSISEDEYYNDVDDGKKDIQKRTYHIWLKYEEISNTS 211
           ++ +DDG     C MHDLMHDLA+SI+  E Y    DG+ +I     H+   Y  +  TS
Sbjct: 83  QEVEDDGFGNITCKMHDLMHDLAQSIAAQECYTTKGDGELEIPNTVRHVAFNYRRV--TS 140

Query: 212 LFKMPLYLRTLSLRSCLS 265
           L K    L   SLRSCLS
Sbjct: 141 LEKK--LLNVQSLRSCLS 156


>ref|XP_002302908.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 970

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/78 (43%), Positives = 43/78 (55%)
 Frame = +2

Query: 32  EKCDDDGRHVTECTMHDLMHDLARSISEDEYYNDVDDGKKDIQKRTYHIWLKYEEISNTS 211
           ++ +DDG     C MHDLMHDLA+SI+  E Y    DG+ +I     H+   Y  +  TS
Sbjct: 356 QEVEDDGFGNITCKMHDLMHDLAQSIAAQECYTTKGDGELEIPNTVRHVAFNYRRV--TS 413

Query: 212 LFKMPLYLRTLSLRSCLS 265
           L K    L   SLRSCLS
Sbjct: 414 LEKK--LLNVQSLRSCLS 429


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|566210834|ref|XP_006372493.1| hypothetical protein
           POPTR_0017s02170g [Populus trichocarpa]
           gi|550319119|gb|ERP50290.1| hypothetical protein
           POPTR_0017s02170g [Populus trichocarpa]
          Length = 1075

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
 Frame = +2

Query: 32  EKCDDDGRHVTECTMHDLMHDLARSISEDEYYNDVDDGKKDIQKRTYHIWLKYEEIS--N 205
           ++  DDG     C MHDLMHDLA+SI+E E Y    DGK +I K   H+    + ++  N
Sbjct: 472 QEVQDDGFGNITCKMHDLMHDLAQSIAEQECYMTEGDGKLEIPKTVRHVAFYNKSVAFYN 531

Query: 206 TSLFKMPLYLRTLSLRSCL 262
            S+      L+ LSLRS L
Sbjct: 532 KSVASSSEVLKVLSLRSLL 550


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