BLASTX nr result
ID: Zingiber23_contig00034423
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00034423
(347 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826317.1| hypothetical protein AMTR_s00004p00087070 [A... 80 3e-13
ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, part... 74 2e-11
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|5... 73 4e-11
emb|CBI35295.3| unnamed protein product [Vitis vinifera] 71 2e-10
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera] 71 2e-10
gb|ESW11246.1| hypothetical protein PHAVU_008G013900g, partial [... 67 2e-09
ref|XP_006364114.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_006585977.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_006585975.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
gb|EMJ11348.1| hypothetical protein PRUPE_ppa024340mg [Prunus pe... 65 1e-08
ref|XP_004248199.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat... 64 3e-08
ref|XP_002324059.1| pentatricopeptide repeat-containing family p... 64 3e-08
ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citr... 63 3e-08
ref|XP_004492098.1| PREDICTED: pentatricopeptide repeat-containi... 63 3e-08
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi... 63 3e-08
>ref|XP_006826317.1| hypothetical protein AMTR_s00004p00087070 [Amborella trichopoda]
gi|548830631|gb|ERM93554.1| hypothetical protein
AMTR_s00004p00087070 [Amborella trichopoda]
Length = 447
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Frame = -1
Query: 329 QILKSAHSHHPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXL--WSETIKAYSRNGR 156
QILK+ HS LL+RLAH YL L A + + W+E +K YSRNG
Sbjct: 41 QILKTQHSEDLSLLSRLAHRYLLCHCLGDALQVFAQMKREKDPHVFLWNEFVKWYSRNGF 100
Query: 155 FRSAIDVFHRMLSLGVCP-NEFTFTFVLPACAGARDADEGRRIHEDVL 15
+ +++ F+R LSL P NEFTFTF+LPACAG+R GR IH ++
Sbjct: 101 YIESME-FYRCLSLSKTPPNEFTFTFILPACAGSRSLFHGRSIHAQII 147
>ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Citrus sinensis]
Length = 644
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/96 (38%), Positives = 55/96 (57%)
Frame = -1
Query: 302 HPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRFRSAIDVFHRM 123
HP L T+L H Y + L A + W+ I+AY+ NG + AI++++R+
Sbjct: 105 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFL-WNVLIRAYAWNGPYEVAIELYYRL 163
Query: 122 LSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVL 15
L +G+ P+ FTF F L AC+ +EGRRIHEDV+
Sbjct: 164 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 199
>ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, partial [Citrus clementina]
gi|557528937|gb|ESR40187.1| hypothetical protein
CICLE_v10027522mg, partial [Citrus clementina]
Length = 488
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/96 (37%), Positives = 53/96 (55%)
Frame = -1
Query: 302 HPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRFRSAIDVFHRM 123
HP L T+L H Y + L A + W+ I+ Y+ NG + AI++++R+
Sbjct: 43 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFL-WNVLIRGYAWNGPYEVAIELYYRL 101
Query: 122 LSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVL 15
L G+ P+ FTF F L AC+ +EGRRIHEDV+
Sbjct: 102 LEFGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 137
>ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|566259938|ref|XP_006389523.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550312346|gb|ERP48437.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 799
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Frame = -1
Query: 332 RQILKSAHSHHPFLLT-------RLAHTYLSASLLPAAQTIXXXXXXXXXXXL-WSETIK 177
+ +LK H H LT +L Y++ S L A+ + + W+ I+
Sbjct: 33 QHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIR 92
Query: 176 AYSRNGRFRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDV 18
AY+ NG + AID++++ML G+ PN FTF FVL AC+ ++A EGR IH D+
Sbjct: 93 AYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDI 145
>emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = -1
Query: 332 RQILKSAHSHHPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRF 153
+ LK+ + +L +L YLS + + A+ + W++ I+AY+ NG F
Sbjct: 32 QHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL-WNQIIRAYAWNGPF 90
Query: 152 RSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFG 6
AID++H ML LGV PN++T+ FVL AC+G ++G IH FG
Sbjct: 91 DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = -1
Query: 332 RQILKSAHSHHPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRF 153
+ LK+ + +L +L YLS + + A+ + W++ I+AY+ NG F
Sbjct: 32 QHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL-WNQIIRAYAWNGPF 90
Query: 152 RSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFG 6
AID++H ML LGV PN++T+ FVL AC+G ++G IH FG
Sbjct: 91 DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = -1
Query: 332 RQILKSAHSHHPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRF 153
+ LK+ + +L +L YLS + + A+ + W++ I+AY+ NG F
Sbjct: 32 QHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL-WNQIIRAYAWNGPF 90
Query: 152 RSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFG 6
AID++H ML LGV PN++T+ FVL AC+G ++G IH FG
Sbjct: 91 DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
>gb|ESW11246.1| hypothetical protein PHAVU_008G013900g, partial [Phaseolus
vulgaris]
Length = 834
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 194 WSETIKAYSRNGRFRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVL 15
W+ I+AYSR F+ AI ++HRML +G+ P+++TFTFVL AC GA EG IH+D+
Sbjct: 91 WNSLIRAYSRLRLFQEAIKLYHRMLCVGLEPDKYTFTFVLKACTGALKFREGVAIHQDIT 150
Query: 14 S 12
S
Sbjct: 151 S 151
>ref|XP_006364114.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like [Solanum tuberosum]
Length = 804
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = -1
Query: 293 LLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXL---WSETIKAYSRNGRFRSAIDVFHRM 123
LL +L Y+S S + A+ + W++ I+AY+ NG F AID+++ M
Sbjct: 60 LLDKLTRFYVSCSRVDLARQVFDLIPNSDRNDKVILWNQMIRAYAWNGPFEKAIDLYYEM 119
Query: 122 LSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDV 18
+ GV P +T+ FV+ AC+ +D + G +IHE V
Sbjct: 120 VEYGVRPTNYTYPFVIKACSALQDVENGEKIHEHV 154
>ref|XP_006585977.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like isoform X3 [Glycine max]
Length = 749
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = -1
Query: 194 WSETIKAYSRNGRFRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVL 15
W+ I+AY+ NG F +I ++HRML LGV P FTF FVL AC+ + GR+IH L
Sbjct: 75 WNMMIRAYAWNGPFLQSIHLYHRMLQLGVTPTNFTFPFVLKACSALQAIQVGRQIHGHAL 134
Query: 14 SFG 6
+ G
Sbjct: 135 TLG 137
>ref|XP_006585975.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like isoform X1 [Glycine max]
gi|571473624|ref|XP_006585976.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16610-like isoform X2 [Glycine max]
Length = 783
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = -1
Query: 194 WSETIKAYSRNGRFRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVL 15
W+ I+AY+ NG F +I ++HRML LGV P FTF FVL AC+ + GR+IH L
Sbjct: 75 WNMMIRAYAWNGPFLQSIHLYHRMLQLGVTPTNFTFPFVLKACSALQAIQVGRQIHGHAL 134
Query: 14 SFG 6
+ G
Sbjct: 135 TLG 137
>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 65.5 bits (158), Expect = 7e-09
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = -1
Query: 311 HSHHPFLLTRLAHTYLS------ASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRFR 150
H+HH +L + YL+ A L+ T+ LW+ I+AYSR F+
Sbjct: 50 HNHHYYLHLLRSCKYLNPLLQIHARLIVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQ 109
Query: 149 SAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLS 12
AI + M +G+ P+++TFTFVL AC GA D EG IH+D+ S
Sbjct: 110 EAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIAS 155
>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/101 (32%), Positives = 55/101 (54%)
Frame = -1
Query: 308 SHHPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRFRSAIDVFH 129
S +P L T+L + Y + L A + W+ I+ Y+ NG + AI +++
Sbjct: 33 SFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFL-WNVMIRGYAWNGPYELAISLYY 91
Query: 128 RMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFG 6
+M G+ P++FTF FVL AC+ +EG++IH+DV+ G
Sbjct: 92 QMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSG 132
>gb|EMJ11348.1| hypothetical protein PRUPE_ppa024340mg [Prunus persica]
Length = 840
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/97 (32%), Positives = 54/97 (55%)
Frame = -1
Query: 296 FLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRFRSAIDVFHRMLS 117
FLL ++AH Y++ + + A + W+ I+AY+ NG F AI +++ +L
Sbjct: 99 FLLEKVAHLYITCNQVDLASRVFDEIPQPSVIL-WNLLIRAYAWNGPFERAIHLYYDLLQ 157
Query: 116 LGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFG 6
GV P ++T+ FVL AC+G + + GR IH+ + G
Sbjct: 158 SGVKPTKYTYPFVLKACSGLQALEAGREIHQHAKALG 194
>ref|XP_004248199.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like [Solanum lycopersicum]
Length = 804
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = -1
Query: 332 RQILKSAH--SHHPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXL---WSETIKAYS 168
+ I+K H + LL +L Y+S S + A+ + W++ I+AY+
Sbjct: 45 QHIIKHNHCNDNRSNLLDKLTRFYVSCSRVDLARQVFDSIPESDRNDRVILWNQMIRAYA 104
Query: 167 RNGRFRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDV 18
NG F ID+++ M+ G+ P +T+ FV+ AC+ +D + G +IHE V
Sbjct: 105 WNGPFEKGIDLYYEMVEYGIRPTNYTYPFVIKACSALQDVENGEKIHEHV 154
>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/97 (31%), Positives = 57/97 (58%)
Frame = -1
Query: 293 LLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRFRSAIDVFHRMLSL 114
+LT+ A Y+S + + AA +I LW+ I+ ++ +GRF S+++++ +M+
Sbjct: 754 ILTKFAIMYVSFNRIDAA-SIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEK 812
Query: 113 GVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFGC 3
G+ P++F F F L +CAG D G+ IH+ ++ GC
Sbjct: 813 GLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGC 849
>ref|XP_002324059.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867061|gb|EEF04192.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 505
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = -1
Query: 194 WSETIKAYSRNGRFRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVL 15
W+ I+ Y+ ++AI VFHRM GV PN FTF FVL ACA +EG+++H D+
Sbjct: 87 WNFLIRGYASGDAPKNAIRVFHRMRKEGVGPNNFTFPFVLKACATCLALEEGKQVHADIF 146
Query: 14 SFG 6
FG
Sbjct: 147 KFG 149
>ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citrus clementina]
gi|557549487|gb|ESR60116.1| hypothetical protein
CICLE_v10017898mg [Citrus clementina]
Length = 714
Score = 63.2 bits (152), Expect = 3e-08
Identities = 33/102 (32%), Positives = 54/102 (52%)
Frame = -1
Query: 311 HSHHPFLLTRLAHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGRFRSAIDVF 132
H H FL+T L Y S + A ++ LW+ I+A+ N +F ++ ++
Sbjct: 73 HHHDLFLVTNLVSQYASLCSISHAFSLFSSVSDSCDLFLWNVMIRAFVDNRQFDRSLQLY 132
Query: 131 HRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFG 6
+M L + P++FTF FVL AC RD + G ++H+DV+ G
Sbjct: 133 AQMRELDINPDKFTFPFVLKACGYLRDIEFGVKVHKDVVDSG 174
>ref|XP_004492098.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Cicer arietinum]
Length = 858
Score = 63.2 bits (152), Expect = 3e-08
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = -1
Query: 194 WSETIKAYSRNGRFRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVL 15
W+ I+AYSR +F AI+++H ML +G+ P+++TFTFVL AC A D EG +++D++
Sbjct: 67 WNSLIRAYSRFLKFHKAINLYHTMLQIGLEPDKYTFTFVLKACTCALDFHEGVSVYKDIV 126
Query: 14 SFG 6
G
Sbjct: 127 LKG 129
>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 63.2 bits (152), Expect = 3e-08
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = -1
Query: 326 ILKSAHSHHPFLLTRL---AHTYLSASLLPAAQTIXXXXXXXXXXXLWSETIKAYSRNGR 156
ILKS H F +RL T A +P A +I W+ I+AY+ +
Sbjct: 30 ILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYM-WNTIIRAYANSPT 88
Query: 155 FRSAIDVFHRMLSLGVCPNEFTFTFVLPACAGARDADEGRRIHEDVLSFG 6
+A+ +FH+ML V P+++TFTF L +C +EGR+IH VL G
Sbjct: 89 PEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138