BLASTX nr result
ID: Zingiber23_contig00034360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00034360
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein... 75 9e-12
ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group] g... 72 1e-10
gb|AFW80983.1| hypothetical protein ZEAMMB73_782047 [Zea mays] 71 1e-10
gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indi... 71 1e-10
ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [S... 71 2e-10
ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare] 70 3e-10
ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 70 4e-10
ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis] 68 1e-09
ref|XP_004961338.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, part... 67 2e-09
gb|AEN80727.1| AT1G07740-like protein, partial [Capsella rubella... 67 2e-09
ref|XP_002892416.1| pentatricopeptide repeat-containing protein ... 67 2e-09
ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
gb|AEN80732.1| AT1G07740-like protein, partial [Capsella rubella] 67 2e-09
gb|ADG37811.1| AT1G07740-like protein [Neslia paniculata] 67 2e-09
>ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Solanum lycopersicum]
Length = 473
Score = 75.9 bits (185), Expect = 5e-12
Identities = 44/97 (45%), Positives = 63/97 (64%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AV+LFH + SF S PSVQS N+ L LV++ R + A +L +S + G+ N+VS
Sbjct: 149 DKAVELFHKIGSFNCS---PSVQSFNAILNVLVDSGRSEAANEML-RSCSKMGIWLNSVS 204
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NI+I+ AR LFDEML++G+ PTVVTY+
Sbjct: 205 FNIIIKMWLKKGDWEMARQLFDEMLERGVEPTVVTYN 241
>gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 951
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/97 (41%), Positives = 61/97 (62%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
++A++LFH + SF +VQSLNS L ALV+N RF A+ + +S G R N+ +
Sbjct: 624 EKAIELFHKMPSFN---CVRTVQSLNSVLNALVDNDRFFDAKVIFDKSPK-MGFRPNSTT 679
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+N++I+G E A LFDEML++ + P+VVTY+
Sbjct: 680 FNVMIKGLLKREAFDEACCLFDEMLERNVEPSVVTYN 716
>ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa
Japonica Group] gi|222632454|gb|EEE64586.1| hypothetical
protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D AV +F + +F + S + +S L ALV N R AR +L A G+R NAVS
Sbjct: 112 DAAVGVFRTVPAF----CSHSAATFHSLLNALVSNGRTDAARDMLPL-APKLGVRLNAVS 166
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
YNI+++G C +G AR + DEML +G+RPTVVT++
Sbjct: 167 YNIILKGACLRDGFMGARGVLDEMLSRGVRPTVVTFN 203
>gb|AFW80983.1| hypothetical protein ZEAMMB73_782047 [Zea mays]
Length = 436
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/97 (42%), Positives = 64/97 (65%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D A+ +F A+ +F ++A + ++ L +LV N R AR +L + A G+R NAVS
Sbjct: 109 DAALLVFRAVPAFCSHSNA----TFHALLHSLVCNGRVDAARDMLPE-APKLGVRTNAVS 163
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
YNI+++G C +G S AR++ DEML +G+RPTVVT++
Sbjct: 164 YNIILKGVCHRDGFSGARVVLDEMLARGVRPTVVTFN 200
>gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D AV +F + +F + S + +S L ALV N R AR +L A G+R NAVS
Sbjct: 112 DAAVGVFRTVPAF----CSHSAATFHSLLNALVSNGRTDAARDMLPL-APKLGVRLNAVS 166
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
YNI+++G C +G AR + DEML +G+RPTVVT++
Sbjct: 167 YNIILKGVCLRDGFMGARGVLDEMLSRGVRPTVVTFN 203
>ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein
SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/97 (42%), Positives = 64/97 (65%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D A+ +F A+ +F ++A + ++ L +LV N R AR +L + A G+R NAVS
Sbjct: 109 DAALLVFRAVPAFCSHSNA----TFHALLHSLVCNGRVDAARDMLPE-APKLGVRTNAVS 163
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
YNI+++G C +G S AR++ DEML +G+RPTVVT++
Sbjct: 164 YNIILKGVCHRDGFSGARVVLDEMLARGLRPTVVTFN 200
>ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 492
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/97 (43%), Positives = 60/97 (61%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AV+LFH + SF S S VQS N+ L V+N R + A +L +S + G+ N+VS
Sbjct: 146 DKAVELFHKMGSFNCSRS---VQSFNAILNVFVDNGRSESANEML-RSCSKMGIWLNSVS 201
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NI+I+ AR LFDEML++ + PTVVTY+
Sbjct: 202 FNIIIKMWLEKGDWEMARQLFDEMLEREVEPTVVTYN 238
>ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 506
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/97 (43%), Positives = 60/97 (61%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AV+LFH + SF S S VQS N+ L V+N R + A +L +S + G+ N+VS
Sbjct: 146 DKAVELFHKMGSFNCSRS---VQSFNAILNVFVDNGRSESANEML-RSCSKMGIWLNSVS 201
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NI+I+ AR LFDEML++ + PTVVTY+
Sbjct: 202 FNIIIKMWLEKGDWEMARQLFDEMLEREVEPTVVTYN 238
>dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/74 (47%), Positives = 53/74 (71%)
Frame = +3
Query: 72 SLNSALAALVENCRFKQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 251
+ ++ + LV N R AR +L + AA G+R NAVSYNI+++G C +GS+ AR++ DE
Sbjct: 128 TFHALIHCLVCNGRVDAARNMLPR-AAKLGVRPNAVSYNIILKGLCGRDGSAGARVVLDE 186
Query: 252 MLQKGIRPTVVTYD 293
ML +G+RPTVVT++
Sbjct: 187 MLGRGVRPTVVTFN 200
>ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +3
Query: 3 DRAVDLFHALRSFE-FSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAV 179
++ ++LFH + SF F T +QS N L LV+ +F +A + Q A G R N+V
Sbjct: 133 EKGIELFHQMPSFNCFRT----LQSFNVLLNTLVDCDQFSKASEIF-QQAYEMGFRPNSV 187
Query: 180 SYNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
SYNI+I+G G A LFDEML+KG++P+VVTY+
Sbjct: 188 SYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYN 225
>ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/97 (42%), Positives = 62/97 (63%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D A+ +F A+ +F ++A + ++ L V N R AR LL + AA G+R NAVS
Sbjct: 107 DAALLVFRAVPAFCSHSNA----TFHALLHCFVCNGRLDAARDLLPR-AAKLGVRPNAVS 161
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
YNI+++G C +G AR++ DEML +G+RPTVVT++
Sbjct: 162 YNIILKGACERDGFVGARVVLDEMLGRGVRPTVVTFN 198
>gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]
Length = 461
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/97 (37%), Positives = 60/97 (61%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+A++LF + SF ++QSLN+ L LV+ RF +A + +S G R N+++
Sbjct: 135 DKAIELFRRIPSFN---CVRTLQSLNALLNVLVDGGRFSEANDVFYRSYK-MGFRPNSIT 190
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NI+I+GC A +FDEML++ ++P+VVTY+
Sbjct: 191 FNIIIKGCLRKGDWEEASKVFDEMLERSVQPSVVTYN 227
>ref|XP_004961338.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Setaria italica]
Length = 435
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/97 (41%), Positives = 61/97 (62%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D A +F A+ +F + S + ++ L +LV N R AR +L Q A G+R NAVS
Sbjct: 109 DAAALVFRAVPAF----CSHSNTTFHALLHSLVCNGRVDAARDMLPQ-APKLGVRTNAVS 163
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
YNI+++G C +G + AR + +EML +G+RPTVVT++
Sbjct: 164 YNIILKGVCHRDGFAGARAVLEEMLARGVRPTVVTFN 200
>ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, partial [Capsella rubella]
gi|482548139|gb|EOA12336.1| hypothetical protein
CARUB_v10007904mg, partial [Capsella rubella]
Length = 551
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/97 (39%), Positives = 61/97 (62%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AVD+FH + SF+ ++QSLN+ + LV+N ++A++ A LR N+VS
Sbjct: 134 DKAVDVFHKMTSFD---CVRTIQSLNTLINVLVDNSELEKAKSFF-DGAKDLRLRPNSVS 189
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NILI+G +A +FDEML+ ++P+VVTY+
Sbjct: 190 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYN 226
>gb|AEN80727.1| AT1G07740-like protein, partial [Capsella rubella]
gi|345288473|gb|AEN80728.1| AT1G07740-like protein,
partial [Capsella rubella] gi|345288475|gb|AEN80729.1|
AT1G07740-like protein, partial [Capsella rubella]
gi|345288477|gb|AEN80730.1| AT1G07740-like protein,
partial [Capsella rubella] gi|345288479|gb|AEN80731.1|
AT1G07740-like protein, partial [Capsella rubella]
gi|345288483|gb|AEN80733.1| AT1G07740-like protein,
partial [Capsella rubella]
Length = 177
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/97 (39%), Positives = 61/97 (62%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AVD+FH + SF+ ++QSLN+ + LV+N ++A++ A LR N+VS
Sbjct: 39 DKAVDVFHKMTSFD---CVRTIQSLNTLINVLVDNSELEKAKSFF-DGAKDLRLRPNSVS 94
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NILI+G +A +FDEML+ ++P+VVTY+
Sbjct: 95 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYN 131
>ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338258|gb|EFH68675.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 459
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/97 (40%), Positives = 61/97 (62%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AVD+FH L SF+ ++QSLN+ + LV+N ++A++ A LR N+VS
Sbjct: 133 DKAVDVFHKLTSFD---CVRTIQSLNTLINVLVDNGELEKAKSFF-DGAKDMRLRPNSVS 188
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NILI+G +A +FDEML+ ++P+VVTY+
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYN 225
>ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 468
Score = 67.0 bits (162), Expect = 2e-09
Identities = 35/97 (36%), Positives = 58/97 (59%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
++A+ LFH + ++ ++QS NS L LV+ RF A + + + G R N++S
Sbjct: 142 NKAIQLFHEMNTYN---CVRTLQSFNSLLNVLVDTDRFSDANEIFGR-CSQMGFRPNSIS 197
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
YNI+I+G AR +FDEML++ ++P+VVTY+
Sbjct: 198 YNIMIKGWLKKGEVEEARKVFDEMLERKVQPSVVTYN 234
>ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +3
Query: 3 DRAVDLFHALRSFE-FSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAV 179
++ ++LFH + SF F T +QS N L LV+ +F +A + Q A R N+V
Sbjct: 133 EKGIELFHQMPSFNCFRT----LQSFNVLLNTLVDCDQFSKASEIF-QQAYEMDFRPNSV 187
Query: 180 SYNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
SYNI+I+G G A LFDEML+KG++P+VVTY+
Sbjct: 188 SYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYN 225
>gb|AEN80732.1| AT1G07740-like protein, partial [Capsella rubella]
Length = 177
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/97 (39%), Positives = 60/97 (61%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AVD+FH + SF+ ++QSLN+ + LV+N ++A+ A LR N+VS
Sbjct: 39 DKAVDVFHKMTSFD---CVRTIQSLNTLINVLVDNSELEKAKTFF-DGAKDLRLRPNSVS 94
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NILI+G +A +FDEML+ ++P+VVTY+
Sbjct: 95 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYN 131
>gb|ADG37811.1| AT1G07740-like protein [Neslia paniculata]
Length = 175
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/97 (40%), Positives = 61/97 (62%)
Frame = +3
Query: 3 DRAVDLFHALRSFEFSTSAPSVQSLNSALAALVENCRFKQARALLAQSAATFGLRANAVS 182
D+AV++FH + SF+ ++QSLN+ + LV+N ++A+ L A LR N+VS
Sbjct: 38 DKAVNVFHNMTSFD---CVRTIQSLNTLINVLVDNSELEKAKNLF-DGAKDMRLRPNSVS 93
Query: 183 YNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYD 293
+NILI+G +A +FDEML+ ++PTVVTY+
Sbjct: 94 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPTVVTYN 130