BLASTX nr result
ID: Zingiber23_contig00034187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00034187
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare] 94 2e-17
gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Tri... 93 3e-17
ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi... 93 4e-17
gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii] 92 7e-17
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays] 92 9e-17
ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mi... 92 9e-17
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR... 92 9e-17
ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG3... 92 9e-17
ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [S... 91 2e-16
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 87 2e-15
gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indi... 87 2e-15
gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japo... 87 2e-15
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 85 9e-15
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi... 84 3e-14
emb|CBI18897.3| unnamed protein product [Vitis vinifera] 84 3e-14
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera] 84 3e-14
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu... 83 4e-14
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 82 7e-14
ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago trunca... 82 7e-14
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 82 7e-14
>dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 572
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
YAEEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLN RNYPD +MET+ VEN
Sbjct: 500 YAEEAEEFKIKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMETAGSEAKVRAEVEN 559
Query: 183 LAE 191
+ E
Sbjct: 560 MEE 562
>gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Triticum urartu]
Length = 575
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
YAEEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLN RNYPD +MET+ VEN
Sbjct: 503 YAEEAEEFKIKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMETAGSEAKVGAEVEN 562
Query: 183 LAE 191
+ E
Sbjct: 563 MEE 565
>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Setaria italica]
Length = 538
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEK 170
Y EEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLNHRNYPD +MET AGA K
Sbjct: 454 YCEEAEEFKVKYIFPHIAAMEHKEGAVALWLHSLNHRNYPDFRYMET---AGAEAK 506
>gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii]
Length = 585
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
YAEEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLN RNYPD +MET+ VEN
Sbjct: 496 YAEEAEEFKIKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMETTGSEAKVGAVVEN 555
Query: 183 LAE 191
+ E
Sbjct: 556 MEE 558
>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
Length = 565
Score = 91.7 bits (226), Expect = 9e-17
Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 13/76 (17%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMET----------SVC 152
Y+EEAE+FK+KYI+ HIA+MEHKEGAVALWLHSLNHRNYPD +MET S+
Sbjct: 480 YSEEAEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNPGAEVESIA 539
Query: 153 AGAHEK---HVENLAE 191
AGA K VEN E
Sbjct: 540 AGAEPKVGAEVENTEE 555
>ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Brachypodium distachyon]
Length = 553
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/63 (66%), Positives = 50/63 (79%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
YAEEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLN RNYPD +ME + + VEN
Sbjct: 481 YAEEAEEFKVKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMENAGSEAKVDAIVEN 540
Query: 183 LAE 191
+ E
Sbjct: 541 MEE 543
>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
synthase family protein [Zea mays]
Length = 562
Score = 91.7 bits (226), Expect = 9e-17
Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 13/76 (17%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMET----------SVC 152
Y+EEAE+FK+KYI+ HIA+MEHKEGAVALWLHSLNHRNYPD +MET S+
Sbjct: 477 YSEEAEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNPGAEVESIA 536
Query: 153 AGAHEK---HVENLAE 191
AGA K VEN E
Sbjct: 537 AGAEPKVGAEVENTEE 552
>ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG38019.1| tRNA
pseudouridine synthase family protein [Zea mays]
Length = 561
Score = 91.7 bits (226), Expect = 9e-17
Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 13/76 (17%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMET----------SVC 152
Y+EEAE+FK+KYI+ HIA+MEHKEGAVALWLHSLNHRNYPD +MET S+
Sbjct: 476 YSEEAEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNAGAEVESIA 535
Query: 153 AGAHEK---HVENLAE 191
AGA K VEN E
Sbjct: 536 AGAEPKVGAEVENTEE 551
>ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [Sorghum bicolor]
gi|241934333|gb|EES07478.1| hypothetical protein
SORBIDRAFT_04g032290 [Sorghum bicolor]
Length = 567
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETS 146
Y EEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLNHRNYPD +MET+
Sbjct: 482 YYEEAEEFKVKYIFPHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETA 529
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
Y+EEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLN RNYPD +M+ + + VE+
Sbjct: 509 YSEEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMDNAGTEASIAAAVES 568
Query: 183 LAE 191
+ E
Sbjct: 569 VDE 571
>gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indica Group]
Length = 581
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
Y+EEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLN RNYPD +M+ + + VE+
Sbjct: 509 YSEEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMDNAGTEASIAAAVES 568
Query: 183 LAE 191
+ E
Sbjct: 569 VDE 571
>gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japonica Group]
Length = 518
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
Y+EEAE+FK+KYI+PHIA+MEHKEGAVALWLHSLN RNYPD +M+ + + VE+
Sbjct: 446 YSEEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMDNAGTEASIAAAVES 505
Query: 183 LAE 191
+ E
Sbjct: 506 VDE 508
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 85.1 bits (209), Expect = 9e-15
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFME 140
Y +EAEDFKM+YIYPHIAS E+KEG V LWLHSLNHRNYPDLG ++
Sbjct: 459 YEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLGILD 504
>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera]
Length = 503
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
YAEEAE+FKMK++Y HIA+ EHKEG VALWLHSLNHRNYPDL + + E
Sbjct: 441 YAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCIGDNGAASDGKNGEEET 500
Query: 183 LAE 191
+A+
Sbjct: 501 MAD 503
>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
Length = 419
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
YAEEAE+FKMK++Y HIA+ EHKEG VALWLHSLNHRNYPDL + + E
Sbjct: 357 YAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCIGDNGAASDGKNGEEET 416
Query: 183 LAE 191
+A+
Sbjct: 417 MAD 419
>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
Length = 559
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMETSVCAGAHEKHVEN 182
YAEEAE+FKMK++Y HIA+ EHKEG VALWLHSLNHRNYPDL + + E
Sbjct: 497 YAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCIGDNGAASDGKNGEEET 556
Query: 183 LAE 191
+A+
Sbjct: 557 MAD 559
>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
gi|550344062|gb|EEE79946.2| hypothetical protein
POPTR_0002s01580g [Populus trichocarpa]
Length = 516
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFMET 143
Y EEAEDFKMK+IY HIA+ EHKEG+VALWLHSLNHRNYPDL T
Sbjct: 443 YEEEAEDFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDLRVSNT 489
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1|
unknown [Medicago truncatula]
Length = 530
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFME 140
Y +EAEDFKM+YIYPHIAS E+KEG V LWLHSLNHRNYPDL ++
Sbjct: 459 YEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILD 504
>ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511409|gb|AES92551.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 361
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFME 140
Y +EAEDFKM+YIYPHIAS E+KEG V LWLHSLNHRNYPDL ++
Sbjct: 290 YEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILD 335
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +3
Query: 3 YAEEAEDFKMKYIYPHIASMEHKEGAVALWLHSLNHRNYPDLGFME 140
Y +EAEDFKM+YIYPHIAS E+KEG V LWLHSLNHRNYPDL ++
Sbjct: 459 YEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILD 504