BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034173
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169821.1| RNA-binding region-containing protein 1 [Zea...    60   4e-07
ref|XP_004300653.1| PREDICTED: uncharacterized protein LOC101313...    59   7e-07
ref|XP_006593561.1| PREDICTED: RNA-binding protein 38-like [Glyc...    59   9e-07
ref|XP_004953965.1| PREDICTED: RNA-binding protein 38-like [Seta...    57   2e-06
ref|XP_003544797.1| PREDICTED: RNA-binding protein 38-like isofo...    55   7e-06

>ref|NP_001169821.1| RNA-binding region-containing protein 1 [Zea mays]
           gi|224031839|gb|ACN34995.1| unknown [Zea mays]
           gi|413944112|gb|AFW76761.1| RNA-binding
           region-containing protein 1 [Zea mays]
          Length = 332

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 46/139 (33%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
 Frame = -1

Query: 523 YQQAAVYSPQMASYYCQQMYGPTTPTNVGPSPYHHHYPNLGLGYSLQSPRAGFPSLPQGP 344
           YQQA   SPQ    Y  Q+YG TT  +   +PYHH Y    LGY    P      LP  P
Sbjct: 181 YQQALA-SPQALQNYYAQLYGLTTSPSAAAAPYHHQY----LGYMAPPPPTPRMILPPPP 235

Query: 343 RTT---------LMHYPASPMEGLFV-------PPQLHA--------PQHASTALNPPQD 236
                       L+ +P  P + + V       PPQ+HA        PQH +  L+PP  
Sbjct: 236 PLAAQQVTAVQPLVQHPPPPAQQVTVQPLLQHPPPQIHAPFFPAPSLPQH-NFRLHPPPQ 294

Query: 235 AQALHEPSSTSGANTDDQD 179
           A A+  P++T+G +    D
Sbjct: 295 AMAVLPPNTTAGGSLPPAD 313


>ref|XP_004300653.1| PREDICTED: uncharacterized protein LOC101313519 [Fragaria vesca
           subsp. vesca]
          Length = 313

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
 Frame = -1

Query: 523 YQQAAVYSPQMA-----SYYCQQMYGPTTPTNVGPSPYHHHYPNLGLGYSLQSPRAGF-P 362
           +QQA +Y+ Q+       YY QQ+YG ++P+ +G +PY++H      GYS QSPR  F P
Sbjct: 186 HQQATMYNQQVVHHQQPQYYQQQLYGASSPSTMG-APYYYHQ-----GYSFQSPRGSFSP 239

Query: 361 SLPQGPR----TTLMHYPASPMEGLF---VPPQLHAPQH-ASTALNPPQDAQALHEPSST 206
             PQ  R     + ++YP   M+  F    PP L  P       L  P D+Q     S+ 
Sbjct: 240 VPPQAHRMPAAASYVYYPTQQMDASFSSYPPPILQPPPTLRRPPLTSPSDSQNPQHASTE 299

Query: 205 S--GANTDD 185
           S  GA T D
Sbjct: 300 SEPGAATSD 308


>ref|XP_006593561.1| PREDICTED: RNA-binding protein 38-like [Glycine max]
          Length = 276

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
 Frame = -1

Query: 523 YQQAAVYSPQMAS--YYCQQMYGPTTPTNVGPSPYHHHYPNLGLGYSLQSPRAGFPS--- 359
           Y QA +Y+PQ+    YY QQ+YGP++ T    SPY++       GYS+Q+PR  F S   
Sbjct: 155 YHQATMYNPQIQQPQYYHQQLYGPSSSTM--GSPYYY-------GYSVQAPRGTFSSTQP 205

Query: 358 --LPQGPRTTLMHYPASPMEGLF----VPPQLHAPQHASTALNPPQDAQALHEPSSTSG 200
             LP GP  + ++YP +PMEG F     PPQL          +P          S T+G
Sbjct: 206 HRLPAGP--SYLYYP-TPMEGSFPAYRPPPQLQQLPIRQPPSSPSDSQTQQRTSSETAG 261


>ref|XP_004953965.1| PREDICTED: RNA-binding protein 38-like [Setaria italica]
          Length = 319

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
 Frame = -1

Query: 517 QAAVYSPQMASYYCQQMYGPTTPTNVGPSPYHHHYPNLGLGYSLQSPRAGFPSLPQGP-R 341
           Q A+Y+PQ+  +Y  QMYGPT+P+  GP PY +    +G      SPR GF S  Q P R
Sbjct: 190 QQALYNPQVLQHYYPQMYGPTSPS--GP-PYQY----MGYMPGGPSPRTGFSSSMQQPAR 242

Query: 340 TTLMHYPASPMEGLF-----VPP--QLHAPQH-ASTALNPPQDAQALHEPSSTSGANTDD 185
                 P + MEG F     +PP  +L  P H  S   +    +Q+    SS    +T++
Sbjct: 243 PPFFQQPTAQMEGSFPSGSSLPPNFRLQLPPHTVSRESDDASGSQSAPPTSSAEATSTNN 302

Query: 184 QDA 176
           Q+A
Sbjct: 303 QEA 305


>ref|XP_003544797.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Glycine max]
           gi|571510921|ref|XP_006596349.1| PREDICTED: RNA-binding
           protein 38-like isoform X2 [Glycine max]
          Length = 274

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
 Frame = -1

Query: 523 YQQAAVYSPQMAS--YYCQQMYGPTTPTNVGPSPYHHHYPNLGLGYSLQSPRAGFPS--- 359
           Y QA++Y+PQ+    YY QQ+YGP++ T    SPY++       GYS+Q+PR  F S   
Sbjct: 153 YHQASLYNPQIQQPQYYHQQLYGPSSSTM--GSPYYY-------GYSVQAPRGTFSSTQP 203

Query: 358 --LPQGPRTTLMHYPASPMEGLF----VPPQLHAPQHASTALNPPQDAQALHEPSSTSG 200
             +P GP  + ++YP +PME  F     PPQL          +P          S T+G
Sbjct: 204 HRIPAGP--SYLYYP-TPMESSFSAYRPPPQLQQLPIRQPPPSPSDSQTQQRASSETAG 259