BLASTX nr result
ID: Zingiber23_contig00034119
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00034119
(303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001045091.1| Os01g0897800 [Oryza sativa Japonica Group] g... 120 2e-25
gb|AAP79440.1| cohesin-like protein [Oryza sativa Indica Group] ... 120 2e-25
gb|AFW84302.1| hypothetical protein ZEAMMB73_139574 [Zea mays] 119 4e-25
ref|XP_004970907.1| PREDICTED: uncharacterized protein LOC101769... 119 5e-25
ref|XP_004970906.1| PREDICTED: uncharacterized protein LOC101769... 119 5e-25
gb|AAQ21081.1| Rad21/Rec8-like protein [Oryza sativa] 119 5e-25
ref|XP_002458921.1| hypothetical protein SORBIDRAFT_03g042710 [S... 118 9e-25
dbj|BAN04694.1| cohesin subunit RAD21-1, partial [Allium cepa] 117 2e-24
dbj|BAN04692.1| cohesin subunit RAD21-1 [Allium cepa] 117 2e-24
ref|XP_006645171.1| PREDICTED: uncharacterized protein LOC102709... 114 1e-23
ref|XP_003564840.1| PREDICTED: uncharacterized protein LOC100841... 114 1e-23
ref|NP_001169484.1| uncharacterized protein LOC100383357 [Zea ma... 112 5e-23
gb|EMS67118.1| Double-strand-break repair protein rad21-like pro... 110 3e-22
ref|XP_006587800.1| PREDICTED: uncharacterized protein LOC100809... 109 4e-22
ref|XP_003533578.1| PREDICTED: uncharacterized protein LOC100809... 109 4e-22
gb|AEY85029.1| cohesin subunit [Camellia sinensis] 108 6e-22
ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com... 108 6e-22
gb|EMT13830.1| Double-strand-break repair protein rad21-like pro... 108 1e-21
gb|EXC24932.1| Sister chromatid cohesion 1 protein 3 [Morus nota... 107 1e-21
ref|XP_003551693.1| PREDICTED: uncharacterized protein LOC100803... 106 3e-21
>ref|NP_001045091.1| Os01g0897800 [Oryza sativa Japonica Group]
gi|56784327|dbj|BAD82348.1| putative RAD21-3 [Oryza
sativa Japonica Group] gi|56785276|dbj|BAD82185.1|
putative RAD21-3 [Oryza sativa Japonica Group]
gi|113534622|dbj|BAF07005.1| Os01g0897800 [Oryza sativa
Japonica Group] gi|222619681|gb|EEE55813.1| hypothetical
protein OsJ_04411 [Oryza sativa Japonica Group]
Length = 1055
Score = 120 bits (301), Expect = 2e-25
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +2
Query: 38 YHEENDVAHAED--------ASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLI 193
Y +E D A D SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+
Sbjct: 948 YDDEVDCDEANDDEPNPEEFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLL 1007
Query: 194 TGKSRKEASRMFFETLVLKTKDYIHVEQENSSGFIT 301
+GK+RKEASRMFFETLVL TKD+I V+Q NS F++
Sbjct: 1008 SGKTRKEASRMFFETLVLTTKDFISVDQPNSFDFVS 1043
>gb|AAP79440.1| cohesin-like protein [Oryza sativa Indica Group]
gi|218189531|gb|EEC71958.1| hypothetical protein
OsI_04789 [Oryza sativa Indica Group]
Length = 1055
Score = 120 bits (301), Expect = 2e-25
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +2
Query: 38 YHEENDVAHAED--------ASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLI 193
Y +E D A D SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+
Sbjct: 948 YDDEVDCDEANDDEPNPEEFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLL 1007
Query: 194 TGKSRKEASRMFFETLVLKTKDYIHVEQENSSGFIT 301
+GK+RKEASRMFFETLVL TKD+I V+Q NS F++
Sbjct: 1008 SGKTRKEASRMFFETLVLTTKDFISVDQPNSFDFVS 1043
>gb|AFW84302.1| hypothetical protein ZEAMMB73_139574 [Zea mays]
Length = 1166
Score = 119 bits (298), Expect = 4e-25
Identities = 58/79 (73%), Positives = 68/79 (86%)
Frame = +2
Query: 65 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLV 244
+E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+ GK+RKEASRMFFETLV
Sbjct: 1076 SEFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLVRGKTRKEASRMFFETLV 1135
Query: 245 LKTKDYIHVEQENSSGFIT 301
L TKDYI V+Q N F++
Sbjct: 1136 LTTKDYISVDQPNPFDFVS 1154
>ref|XP_004970907.1| PREDICTED: uncharacterized protein LOC101769240 isoform X2 [Setaria
italica]
Length = 1049
Score = 119 bits (297), Expect = 5e-25
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = +2
Query: 68 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLVL 247
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+ GK+RKEASRMFFETLVL
Sbjct: 960 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLVRGKTRKEASRMFFETLVL 1019
Query: 248 KTKDYIHVEQENSSGFIT 301
TKDYI V+Q N F++
Sbjct: 1020 TTKDYISVDQPNPFDFVS 1037
>ref|XP_004970906.1| PREDICTED: uncharacterized protein LOC101769240 isoform X1 [Setaria
italica]
Length = 1063
Score = 119 bits (297), Expect = 5e-25
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = +2
Query: 68 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLVL 247
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+ GK+RKEASRMFFETLVL
Sbjct: 974 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLVRGKTRKEASRMFFETLVL 1033
Query: 248 KTKDYIHVEQENSSGFIT 301
TKDYI V+Q N F++
Sbjct: 1034 TTKDYISVDQPNPFDFVS 1051
>gb|AAQ21081.1| Rad21/Rec8-like protein [Oryza sativa]
Length = 1055
Score = 119 bits (297), Expect = 5e-25
Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +2
Query: 38 YHEENDVAHAED--------ASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLI 193
Y +E D A D SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+
Sbjct: 948 YDDEVDCDEANDDEPNPEEFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLL 1007
Query: 194 TGKSRKEASRMFFETLVLKTKDYIHVEQENSSGFIT 301
+GK+RKEASRMFFETLVL TKD+I V++ NS F++
Sbjct: 1008 SGKTRKEASRMFFETLVLTTKDFISVDRPNSFDFVS 1043
>ref|XP_002458921.1| hypothetical protein SORBIDRAFT_03g042710 [Sorghum bicolor]
gi|241930896|gb|EES04041.1| hypothetical protein
SORBIDRAFT_03g042710 [Sorghum bicolor]
Length = 1088
Score = 118 bits (295), Expect = 9e-25
Identities = 57/79 (72%), Positives = 68/79 (86%)
Frame = +2
Query: 65 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLV 244
+E SL+NSGWSSRTRGVAR+LK +FDE+SG GRKSVA+DHL+ GK+RKEASRMFFETLV
Sbjct: 998 SEFQSLDNSGWSSRTRGVARYLKTLFDEDSGLGRKSVAIDHLVRGKTRKEASRMFFETLV 1057
Query: 245 LKTKDYIHVEQENSSGFIT 301
L TKDYI V+Q N F++
Sbjct: 1058 LTTKDYISVDQPNPYDFVS 1076
>dbj|BAN04694.1| cohesin subunit RAD21-1, partial [Allium cepa]
Length = 1090
Score = 117 bits (292), Expect = 2e-24
Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Frame = +2
Query: 38 YHEEN--DVAHAEDA-SLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSR 208
Y E+ DV +AEDA SLE GWS+RTRGVA +LK +FD+ESG GRKSVA+D L+ GK+R
Sbjct: 988 YEEDTTTDVQNAEDAQSLETVGWSARTRGVANYLKIMFDQESGRGRKSVAIDQLLAGKTR 1047
Query: 209 KEASRMFFETLVLKTKDYIHVEQENSSGFI 298
KEASRMFFETLVLKT+DYI VEQE +I
Sbjct: 1048 KEASRMFFETLVLKTRDYIQVEQEKPYAYI 1077
>dbj|BAN04692.1| cohesin subunit RAD21-1 [Allium cepa]
Length = 1825
Score = 117 bits (292), Expect = 2e-24
Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Frame = +2
Query: 38 YHEEN--DVAHAEDA-SLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSR 208
Y E+ DV +AEDA SLE GWS+RTRGVA +LK +FD+ESG GRKSVA+D L+ GK+R
Sbjct: 1723 YEEDTTTDVQNAEDAQSLETVGWSARTRGVANYLKIMFDQESGRGRKSVAIDQLLAGKTR 1782
Query: 209 KEASRMFFETLVLKTKDYIHVEQENSSGFI 298
KEASRMFFETLVLKT+DYI VEQE +I
Sbjct: 1783 KEASRMFFETLVLKTRDYIQVEQEKPYAYI 1812
>ref|XP_006645171.1| PREDICTED: uncharacterized protein LOC102709790 [Oryza brachyantha]
Length = 1060
Score = 114 bits (286), Expect = 1e-23
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = +2
Query: 68 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLVL 247
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+D L++GK+RKEASRMFFETLVL
Sbjct: 971 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDRLLSGKTRKEASRMFFETLVL 1030
Query: 248 KTKDYIHVEQENSSGFIT 301
TKD+I V+Q N F++
Sbjct: 1031 TTKDFISVDQPNPFDFVS 1048
>ref|XP_003564840.1| PREDICTED: uncharacterized protein LOC100841414 [Brachypodium
distachyon]
Length = 1077
Score = 114 bits (285), Expect = 1e-23
Identities = 53/71 (74%), Positives = 63/71 (88%)
Frame = +2
Query: 89 SGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLVLKTKDYIH 268
SGWSSRTRGVAR+LK +FDEESG GRK++A+DHL+ GK+RKEASRMFFETLVL TKDYIH
Sbjct: 995 SGWSSRTRGVARYLKTLFDEESGLGRKNIAIDHLLRGKTRKEASRMFFETLVLSTKDYIH 1054
Query: 269 VEQENSSGFIT 301
V+Q N F++
Sbjct: 1055 VDQPNPFDFVS 1065
>ref|NP_001169484.1| uncharacterized protein LOC100383357 [Zea mays]
gi|224029613|gb|ACN33882.1| unknown [Zea mays]
gi|414879205|tpg|DAA56336.1| TPA: hypothetical protein
ZEAMMB73_378457 [Zea mays] gi|414879206|tpg|DAA56337.1|
TPA: hypothetical protein ZEAMMB73_378457 [Zea mays]
Length = 1183
Score = 112 bits (280), Expect = 5e-23
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +2
Query: 68 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLVL 247
E SL+NSGWSSRTRGVAR+LK +FD+ESG RKSVA+DHL+ GK+RKEASRMFFETLVL
Sbjct: 1094 EFQSLDNSGWSSRTRGVARYLKALFDDESGLERKSVAIDHLVRGKTRKEASRMFFETLVL 1153
Query: 248 KTKDYIHVEQEN 283
TKDYI V+Q N
Sbjct: 1154 TTKDYISVDQPN 1165
>gb|EMS67118.1| Double-strand-break repair protein rad21-like protein [Triticum
urartu]
Length = 1584
Score = 110 bits (274), Expect = 3e-22
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +2
Query: 89 SGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLVLKTKDYIH 268
SGWSSRT+GVAR+LK +FDEESG GRK+V +DHL+ GKSRKEASRMFFETLVL TKDYI
Sbjct: 1502 SGWSSRTKGVARYLKTLFDEESGRGRKNVVIDHLVNGKSRKEASRMFFETLVLSTKDYIQ 1561
Query: 269 VEQENSSGFI 298
VEQ G I
Sbjct: 1562 VEQPIPFGLI 1571
>ref|XP_006587800.1| PREDICTED: uncharacterized protein LOC100809967 isoform X2 [Glycine
max]
Length = 1224
Score = 109 bits (272), Expect = 4e-22
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +2
Query: 65 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLV 244
AE +LENSGWSSRTR VA++L+ VFD+E HGRK + LD+L+ GK+RKEASRMFFETLV
Sbjct: 1134 AEGTNLENSGWSSRTRAVAKYLQTVFDKEDLHGRKELHLDNLLVGKTRKEASRMFFETLV 1193
Query: 245 LKTKDYIHVEQ 277
LKT+DY+HVEQ
Sbjct: 1194 LKTRDYVHVEQ 1204
>ref|XP_003533578.1| PREDICTED: uncharacterized protein LOC100809967 isoform X1 [Glycine
max]
Length = 1247
Score = 109 bits (272), Expect = 4e-22
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +2
Query: 65 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLV 244
AE +LENSGWSSRTR VA++L+ VFD+E HGRK + LD+L+ GK+RKEASRMFFETLV
Sbjct: 1157 AEGTNLENSGWSSRTRAVAKYLQTVFDKEDLHGRKELHLDNLLVGKTRKEASRMFFETLV 1216
Query: 245 LKTKDYIHVEQ 277
LKT+DY+HVEQ
Sbjct: 1217 LKTRDYVHVEQ 1227
>gb|AEY85029.1| cohesin subunit [Camellia sinensis]
Length = 1336
Score = 108 bits (271), Expect = 6e-22
Identities = 52/79 (65%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Frame = +2
Query: 44 EENDVAHAEDAS-LENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEAS 220
+++DV AE S LENSGWSSRTR VA++L+ +FD+E+ HGRK +++D+L+ GK+RKEAS
Sbjct: 1238 DDHDVPSAEQTSFLENSGWSSRTRAVAKYLQVLFDKEAEHGRKVLSMDNLLVGKTRKEAS 1297
Query: 221 RMFFETLVLKTKDYIHVEQ 277
RMFFE LVLKT+DYIHVEQ
Sbjct: 1298 RMFFEALVLKTRDYIHVEQ 1316
>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
putative [Ricinus communis]
Length = 1247
Score = 108 bits (271), Expect = 6e-22
Identities = 52/79 (65%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Frame = +2
Query: 44 EENDVAHAEDASL-ENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEAS 220
+ + +AED L ENSGWSSRTR VA++L+ +FD+E+ HGRK + +D+L+TGK+RKEAS
Sbjct: 1149 DNEGLPNAEDPRLLENSGWSSRTRAVAKYLQTLFDKEAEHGRKVLLMDNLLTGKTRKEAS 1208
Query: 221 RMFFETLVLKTKDYIHVEQ 277
RMFFETLVLKTKDY+HVEQ
Sbjct: 1209 RMFFETLVLKTKDYVHVEQ 1227
>gb|EMT13830.1| Double-strand-break repair protein rad21-like protein 1 [Aegilops
tauschii]
Length = 1462
Score = 108 bits (269), Expect = 1e-21
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +2
Query: 89 SGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLVLKTKDYIH 268
SGWSSRT+GVAR+LK +FDEESG GRK+V +DHL+ GKSRKEASRMFFETLVL TKDYI
Sbjct: 1380 SGWSSRTKGVARYLKTLFDEESGRGRKNVVIDHLVHGKSRKEASRMFFETLVLSTKDYIQ 1439
Query: 269 VEQENSSGFI 298
V+Q G I
Sbjct: 1440 VDQPIPFGLI 1449
>gb|EXC24932.1| Sister chromatid cohesion 1 protein 3 [Morus notabilis]
Length = 1177
Score = 107 bits (268), Expect = 1e-21
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +2
Query: 44 EENDVAHAEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASR 223
E+N+ + LEN+GWSSRTR VA++L+ +FD+E HGR+ + +D+L+TGK+RKEASR
Sbjct: 1080 EDNEPGTEDTRLLENTGWSSRTRAVAKYLQTLFDKEELHGRRVLPMDNLLTGKTRKEASR 1139
Query: 224 MFFETLVLKTKDYIHVEQ 277
MFFETLVLKTKDYIHVEQ
Sbjct: 1140 MFFETLVLKTKDYIHVEQ 1157
>ref|XP_003551693.1| PREDICTED: uncharacterized protein LOC100803412 [Glycine max]
Length = 1223
Score = 106 bits (265), Expect = 3e-21
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +2
Query: 65 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVALDHLITGKSRKEASRMFFETLV 244
AE +LENSGWSSRTR VA +L+ VFD+E HGRK + L++L+ GK+RKEASRMFFETLV
Sbjct: 1133 AEGTNLENSGWSSRTRAVANYLQTVFDKEDLHGRKELHLNNLLVGKTRKEASRMFFETLV 1192
Query: 245 LKTKDYIHVEQ 277
LKT+DY+HVEQ
Sbjct: 1193 LKTRDYVHVEQ 1203