BLASTX nr result
ID: Zingiber23_contig00034115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00034115
(294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001137007.1| uncharacterized protein LOC100217173 [Zea ma... 99 6e-19
ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1... 98 1e-18
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare] 98 1e-18
dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Gr... 97 3e-18
gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indi... 97 3e-18
ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group] g... 97 3e-18
tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil... 96 5e-18
ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S... 96 5e-18
ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea ma... 96 5e-18
ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|1... 96 5e-18
gb|AFW59092.1| putative RING zinc finger domain superfamily prot... 95 9e-18
ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 95 1e-17
ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 95 1e-17
dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 2e-16
ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group] g... 91 2e-16
ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 90 4e-16
ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 89 5e-16
ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 86 7e-15
tpg|DAA46363.1| TPA: putative RING zinc finger domain superfamil... 84 2e-14
ref|XP_003581575.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 84 2e-14
>ref|NP_001137007.1| uncharacterized protein LOC100217173 [Zea mays]
gi|194697958|gb|ACF83063.1| unknown [Zea mays]
Length = 367
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 13/87 (14%)
Frame = -1
Query: 288 SSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTP---- 121
SSPDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSCPLCR+ V LPP P
Sbjct: 144 SSPDCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLRTAPSCPLCRSAVALPPHPSQAQ 203
Query: 120 ---------PSGAALPVKMSTTASQGG 67
SG + V+M T +++GG
Sbjct: 204 QPPTPRARGQSGPSFLVEMGTVSTRGG 230
>ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1|
RING-H2 finger protein ATL3J [Zea mays]
Length = 397
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/92 (51%), Positives = 55/92 (59%), Gaps = 18/92 (19%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP------ 130
KSSPDC VCL PF PD D+R LPAC HAFHA CVD W++ +PSCPLCRA V LP
Sbjct: 140 KSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALPHPSLSG 199
Query: 129 ------------PTPPSGAALPVKMSTTASQG 70
P P G + V+M T +S+G
Sbjct: 200 MLAAAQAQRPARPGPGPGPSFLVEMGTVSSRG 231
>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP----PT 124
KSSPDC VCL PF+PD ++R LPAC HAFHA CVD W++N+PSCPLCRA + LP P
Sbjct: 146 KSSPDCAVCLSPFVPDAELRLLPACRHAFHAACVDAWLRNTPSCPLCRAAISLPHPPLPA 205
Query: 123 PPSGAALPVKMSTTASQGGS 64
+GAA + +S S
Sbjct: 206 AYTGAAQQEPLDARSSSNAS 225
>dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Group]
Length = 502
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTPPSG 112
KSSPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +PSCPLCRATV L P PP
Sbjct: 273 KSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVSL-PHPPLP 331
Query: 111 AALPVKMSTTASQ 73
A S A Q
Sbjct: 332 TAAAAAASNAAQQ 344
>gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indica Group]
Length = 267
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTPPSG 112
KSSPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +PSCPLCRATV L P PP
Sbjct: 38 KSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVSL-PHPPLP 96
Query: 111 AALPVKMSTTASQ 73
A S A Q
Sbjct: 97 TAAAAAASNAAQQ 109
>ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group]
gi|113537311|dbj|BAF09694.1| Os02g0688800 [Oryza sativa
Japonica Group] gi|125583300|gb|EAZ24231.1| hypothetical
protein OsJ_07979 [Oryza sativa Japonica Group]
Length = 373
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTPPSG 112
KSSPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +PSCPLCRATV L P PP
Sbjct: 144 KSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVSL-PHPPLP 202
Query: 111 AALPVKMSTTASQ 73
A S A Q
Sbjct: 203 TAAAAAASNAAQQ 215
>tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 397
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 16/90 (17%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP------ 130
KSSPDC VCL PF PD D+R LPAC HAFHA CVD W++ +PSCPLCRA V LP
Sbjct: 142 KSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALPHPSLSG 201
Query: 129 ----------PTPPSGAALPVKMSTTASQG 70
P G++ V+M T +++G
Sbjct: 202 MLAAAQARARDRPGPGSSFLVEMGTVSNRG 231
>ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor]
gi|241934288|gb|EES07433.1| hypothetical protein
SORBIDRAFT_04g031430 [Sorghum bicolor]
Length = 400
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/72 (61%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLL------- 133
KSSPDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSCPLCRA V L
Sbjct: 146 KSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSLPHPPLPT 205
Query: 132 -PPTPPSGAALP 100
PP PP AA P
Sbjct: 206 APPPPPQPAAGP 217
>ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea mays]
gi|194702970|gb|ACF85569.1| unknown [Zea mays]
Length = 265
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 16/90 (17%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP------ 130
KSSPDC VCL PF PD D+R LPAC HAFHA CVD W++ +PSCPLCRA V LP
Sbjct: 10 KSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALPHPSLSG 69
Query: 129 ----------PTPPSGAALPVKMSTTASQG 70
P G++ V+M T +++G
Sbjct: 70 MLAAAQARARDRPGPGSSFLVEMGTVSNRG 99
>ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|194689566|gb|ACF78867.1|
unknown [Zea mays] gi|194707760|gb|ACF87964.1| unknown
[Zea mays] gi|413938299|gb|AFW72850.1| putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 378
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/66 (66%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP----PT 124
KSSPDC VCL PF PD D+R LPAC HAFHA CVD W++ +PSCPLCRA V LP PT
Sbjct: 139 KSSPDCAVCLSPFSPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSLPHPPLPT 198
Query: 123 PPSGAA 106
P AA
Sbjct: 199 APPLAA 204
>gb|AFW59092.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 372
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 23/97 (23%)
Frame = -1
Query: 288 SSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTPP--- 118
SSPDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSCPLCR+ V LPP P
Sbjct: 139 SSPDCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLRTAPSCPLCRSAVALPPHPSRSD 198
Query: 117 --------------------SGAALPVKMSTTASQGG 67
SG + V+M T +++GG
Sbjct: 199 MHAAGAAQQPPTPTPRARGRSGPSFLVEMGTVSNRGG 235
>ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 402
Score = 94.7 bits (234), Expect = 1e-17
Identities = 49/84 (58%), Positives = 56/84 (66%), Gaps = 7/84 (8%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP----PT 124
KSSPDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSCPLCRA V LP PT
Sbjct: 150 KSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSLPHPPLPT 209
Query: 123 --PPSGAALPVKMSTTASQ-GGSS 61
P + AA P S+ GGSS
Sbjct: 210 AAPAAAAAGPGAQEPLDSRVGGSS 233
>ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
distachyon]
Length = 443
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTP--- 121
KSSPDC VCL PFL D ++R LPAC HAFHA CVD W++ +PSCPLCRA + LP P
Sbjct: 207 KSSPDCAVCLSPFLADAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAISLPHPPLPT 266
Query: 120 -----PSGAALPVKMSTTASQGGSSLRDE 49
+GA L + + +S S R E
Sbjct: 267 AAAAAGAGAGLQEPLDSRSSTNSRSFRVE 295
>dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 27/103 (26%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVL-------- 136
+SSPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +P+CPLCRATV
Sbjct: 93 RSSPDCAVCLSPFRPEAELRLLPACRHAFHAVCVDAWLRTTPTCPLCRATVAPPHPSIAA 152
Query: 135 --------LPPTPPSGAA-----------LPVKMSTTASQGGS 64
PP PP AA V+M + +S+GGS
Sbjct: 153 LLAAQQQQQPPPPPEPAAARGRDRSSRFHFRVEMGSVSSRGGS 195
>ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group]
gi|32488757|emb|CAE04310.1| OSJNBb0016D16.1 [Oryza
sativa Japonica Group] gi|38344287|emb|CAE03770.2|
OSJNBa0013K16.19 [Oryza sativa Japonica Group]
gi|113565258|dbj|BAF15601.1| Os04g0586700 [Oryza sativa
Japonica Group] gi|125549503|gb|EAY95325.1| hypothetical
protein OsI_17152 [Oryza sativa Indica Group]
gi|215693347|dbj|BAG88729.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 359
Score = 90.9 bits (224), Expect = 2e-16
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP 130
KSSPDC VCL PF D ++R LPAC HAFHA CVD W++ +PSCPLCRATV LP
Sbjct: 123 KSSPDCAVCLSPFTLDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRATVTLP 176
>ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Oryza
brachyantha]
Length = 360
Score = 89.7 bits (221), Expect = 4e-16
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP 130
KSSPDC VCL PF D ++R LPAC HAFHA CVD W++ +PSCPLCRATV +P
Sbjct: 124 KSSPDCAVCLSPFTLDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRATVSIP 177
>ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 380
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTPPS 115
KSSPDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSCPLCRA V P PS
Sbjct: 136 KSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAV--APLHPS 192
>ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 256
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVL--LPPTPP 118
K+SPDC VCL PF PD +R LP C HAFHA C+D W++ +P CP+CR+ V LPP P
Sbjct: 22 KNSPDCAVCLSPFEPDAGLRLLPTCRHAFHAACIDAWLRTNPVCPICRSAVSFPLPPLPA 81
Query: 117 SGAA 106
AA
Sbjct: 82 PAAA 85
>tpg|DAA46363.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 379
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTPPSG 112
KSS DC VC F D+++R LPAC HAFH+ CVD W++ +PSCPLCRA++ L P PP
Sbjct: 150 KSSRDCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRGNPSCPLCRASIAL-PCPPLT 208
Query: 111 AALPVKMSTTASQ 73
L V++ + +S+
Sbjct: 209 DLLRVELGSVSSR 221
>ref|XP_003581575.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
distachyon]
Length = 359
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = -1
Query: 291 KSSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQ-NSPSCPLCRATVLLPPTPPS 115
KSSPDC VCL PF PD ++R LPAC HAFHA CVD W++ +P+CPLCRA V L PS
Sbjct: 119 KSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRAAAPTCPLCRAAVTL--QHPS 176
Query: 114 GAAL 103
AA+
Sbjct: 177 VAAI 180