BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034045
         (273 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59883.1| binding protein, partial [Genlisea aurea]               74   3e-11
gb|EXB60117.1| hypothetical protein L484_013382 [Morus notabilis]      73   4e-11
ref|XP_006472819.1| PREDICTED: pentatricopeptide repeat-containi...    69   8e-10
ref|XP_006386364.1| hypothetical protein POPTR_0002s08080g [Popu...    68   1e-09
ref|XP_006302269.1| hypothetical protein CARUB_v10020312mg [Caps...    68   1e-09
ref|XP_004292714.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_006434253.1| hypothetical protein CICLE_v10003743mg [Citr...    66   4e-09
ref|XP_006390093.1| hypothetical protein EUTSA_v10019853mg [Eutr...    66   4e-09
gb|EOY16374.1| Pentatricopeptide repeat (PPR) superfamily protei...    65   1e-08
gb|EOY16373.1| Pentatricopeptide repeat superfamily protein isof...    65   1e-08
gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thal...    64   2e-08
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...    64   2e-08
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...    64   2e-08
gb|ESW33688.1| hypothetical protein PHAVU_001G090600g [Phaseolus...    64   3e-08
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...    61   1e-07
ref|XP_006351204.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_004244895.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
emb|CBI15606.3| unnamed protein product [Vitis vinifera]               59   7e-07

>gb|EPS59883.1| binding protein, partial [Genlisea aurea]
          Length = 414

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/70 (60%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESS-SSAGS--RGPAK 243
           WTSDAV   L SIP + F SPRS+GRQRT  RHRSPL+QR L+ E++    GS   GPA 
Sbjct: 18  WTSDAVIQVLRSIPLHLFQSPRSIGRQRTF-RHRSPLKQRNLKEETARRQTGSLVLGPAA 76

Query: 244 HRDPESVGLG 273
           HR+P+SV LG
Sbjct: 77  HRNPKSVNLG 86


>gb|EXB60117.1| hypothetical protein L484_013382 [Morus notabilis]
          Length = 444

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLES---SSSAGSRGPAK 243
           W+++AV + L S+P +FF SPRS+GRQ+   RHRSPL+QR L+ ES   S++    GPA 
Sbjct: 39  WSAEAVSEVLRSVPRFFFQSPRSIGRQK-GFRHRSPLKQRNLKQESLKFSNNVLVLGPAA 97

Query: 244 HRDPESVGLG 273
           HRDPE V LG
Sbjct: 98  HRDPEKVQLG 107


>ref|XP_006472819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like isoform X1 [Citrus sinensis]
           gi|568837618|ref|XP_006472820.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like isoform X2 [Citrus sinensis]
          Length = 451

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           +T ++V D L SIP +FF SPRS+GRQ T  RHR+PLRQR L+ E+ + A +    GPA 
Sbjct: 43  FTIESVADVLKSIPRFFFQSPRSIGRQ-TGFRHRTPLRQRILKKEAYNIANNVLVLGPAA 101

Query: 244 HRDPESVGLG 273
           +RDP+ V LG
Sbjct: 102 YRDPQKVTLG 111


>ref|XP_006386364.1| hypothetical protein POPTR_0002s08080g [Populus trichocarpa]
           gi|550344529|gb|ERP64161.1| hypothetical protein
           POPTR_0002s08080g [Populus trichocarpa]
          Length = 448

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
 Frame = +1

Query: 76  TSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAKH 246
           T D+V D L SIP +FFLSPRS+GRQ T+  HRSPL+QR L+ E+  S  +    GPA +
Sbjct: 45  TIDSVSDILRSIPRFFFLSPRSIGRQNTA-FHRSPLKQRKLKEETHKSRHNVLILGPAAY 103

Query: 247 RDPESVGLG 273
           RDP+ V LG
Sbjct: 104 RDPKRVALG 112


>ref|XP_006302269.1| hypothetical protein CARUB_v10020312mg [Capsella rubella]
           gi|482570979|gb|EOA35167.1| hypothetical protein
           CARUB_v10020312mg [Capsella rubella]
          Length = 438

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESS---SSAGSRGPAK 243
           W+   V D L SIP +FF+SPRS+GRQ+   RHRSPL+QR LR ES    S     GPA 
Sbjct: 36  WSQQLVSDVLRSIPRFFFISPRSIGRQK-GFRHRSPLKQRNLREESQRRRSEVLVLGPAA 94

Query: 244 HRDPESVGLG 273
           + DP+ V LG
Sbjct: 95  YMDPKKVSLG 104


>ref|XP_004292714.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Fragaria vesca subsp. vesca]
          Length = 444

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           WT+D+V   L+SIPT+FF SPRS+GRQ    RHR+PL+QR LR E+          GPA 
Sbjct: 40  WTTDSVSQVLTSIPTFFFHSPRSIGRQ-PGFRHRAPLKQRNLRQETYKFHNDILLLGPAA 98

Query: 244 HRDPESVGLG 273
           HRD   V LG
Sbjct: 99  HRDLNKVNLG 108


>ref|XP_006434253.1| hypothetical protein CICLE_v10003743mg [Citrus clementina]
           gi|557536375|gb|ESR47493.1| hypothetical protein
           CICLE_v10003743mg [Citrus clementina]
          Length = 451

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           +T ++V D L SIP +FF SPRS+GRQ T  RHR+PL+QR L+ E+ + A +    GPA 
Sbjct: 43  FTIESVADVLKSIPRFFFQSPRSIGRQ-TGFRHRTPLKQRILKKEADNIANNVLVLGPAA 101

Query: 244 HRDPESVGLG 273
           +R+P+ V LG
Sbjct: 102 YRNPQKVTLG 111


>ref|XP_006390093.1| hypothetical protein EUTSA_v10019853mg [Eutrema salsugineum]
           gi|557086527|gb|ESQ27379.1| hypothetical protein
           EUTSA_v10019853mg [Eutrema salsugineum]
          Length = 451

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESS---SSAGSRGPAK 243
           W+   V D L SIP +FF+SPRS+GRQ+   RHRSPL+QR LR ES    S     GP  
Sbjct: 38  WSQQIVSDVLRSIPRFFFISPRSIGRQK-GFRHRSPLKQRNLRDESQRRRSEVLVMGPGA 96

Query: 244 HRDPESVGLG 273
           + DP+ V LG
Sbjct: 97  YMDPKKVSLG 106


>gb|EOY16374.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao]
          Length = 438

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           WT+DAV D L S+  +FF SPRS+G Q T  RHR+PL+QR ++ E+  +  +    GPA 
Sbjct: 41  WTTDAVSDILRSVSKFFFQSPRSIGSQ-TGFRHRAPLKQRNIKQENFKNYQNVLILGPAA 99

Query: 244 HRDPESVGLG 273
           +RDP+ V LG
Sbjct: 100 YRDPKRVALG 109


>gb|EOY16373.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 586

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           WT+DAV D L S+  +FF SPRS+G Q T  RHR+PL+QR ++ E+  +  +    GPA 
Sbjct: 41  WTTDAVSDILRSVSKFFFQSPRSIGSQ-TGFRHRAPLKQRNIKQENFKNYQNVLILGPAA 99

Query: 244 HRDPESVGLG 273
           +RDP+ V LG
Sbjct: 100 YRDPKRVALG 109


>gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thaliana]
          Length = 410

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESS---SSAGSRGPAK 243
           WT   V D L SIP +FF+SPRS+GRQ+   RHRSPL+QR L  ES    S     GP  
Sbjct: 38  WTQQLVSDVLHSIPRFFFISPRSIGRQK-GFRHRSPLKQRNLSDESQRRRSEVLVLGPGA 96

Query: 244 HRDPESVGLG 273
           + DP+ V +G
Sbjct: 97  YMDPKKVSIG 106


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESS---SSAGSRGPAK 243
           WT   V D L SIP +FF+SPRS+GRQ+   RHRSPL+QR L  ES    S     GP  
Sbjct: 38  WTQQLVSDVLHSIPRFFFISPRSIGRQK-GFRHRSPLKQRNLSDESQRRRSEVLVLGPGA 96

Query: 244 HRDPESVGLG 273
           + DP+ V +G
Sbjct: 97  YMDPKKVSIG 106


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESS---SSAGSRGPAK 243
           WT   V D L SIP +FF+SPRS+GRQ+   RHRSPL+QR L  ES    S     GP  
Sbjct: 38  WTQQLVSDVLRSIPRFFFISPRSIGRQK-GFRHRSPLKQRNLSDESQRRRSEVLVLGPGA 96

Query: 244 HRDPESVGLG 273
           + DP+ + LG
Sbjct: 97  YIDPKKISLG 106


>gb|ESW33688.1| hypothetical protein PHAVU_001G090600g [Phaseolus vulgaris]
           gi|561035159|gb|ESW33689.1| hypothetical protein
           PHAVU_001G090600g [Phaseolus vulgaris]
          Length = 445

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGSR---GPAK 243
           WT+DAV + L SI  Y   SPRS+GRQ +  RHR+PLRQR L LE      +    GPA 
Sbjct: 42  WTNDAVTEVLRSISRYTLQSPRSIGRQ-SGFRHRTPLRQRNLNLEHHKLRNNTLVLGPAA 100

Query: 244 HRDPESVGLG 273
           H+DP  V LG
Sbjct: 101 HQDPYKVHLG 110


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
 Frame = +1

Query: 76  TSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAKH 246
           +S+ + D L SIP +FF S RSVGRQ T+ RHRSPL+QR L+ E+          GPA +
Sbjct: 38  SSNLISDVLRSIPRFFFQSTRSVGRQSTT-RHRSPLKQRSLKQETHKHNNKLLILGPAAY 96

Query: 247 RDPESVGLG 273
           +DP+ V LG
Sbjct: 97  KDPKRVKLG 105


>ref|XP_006351204.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Solanum tuberosum]
          Length = 440

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           WT + V   L SIP + F SPRS+GRQ    R+R+PL+QR L+ E  ++       GPA 
Sbjct: 39  WTVETVSQVLRSIPRFLFQSPRSIGRQ-NGFRYRTPLKQRNLKQEFHNAQKGVLILGPAA 97

Query: 244 HRDPESVGLG 273
           HRDP+ V LG
Sbjct: 98  HRDPQKVQLG 107


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           W+SD+V D L S+P +FF S RS+G Q+   RHR+PL+QR L+ E+     +    GP  
Sbjct: 45  WSSDSVSDVLRSVPRFFFQSARSIGTQK-GFRHRTPLKQRKLKEEAYKFRNNVLVLGPGA 103

Query: 244 HRDPESVGLG 273
           HRDP    LG
Sbjct: 104 HRDPFKAKLG 113


>ref|XP_004244895.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Solanum lycopersicum]
          Length = 426

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGS---RGPAK 243
           WT + V   L SIP + F SPRS+GRQ    RHR+PL+QR L+ E  ++       GPA 
Sbjct: 23  WTVETVSQVLRSIPRFLFQSPRSIGRQ-NGFRHRTPLKQRNLKQELHNARKGVLILGPAA 81

Query: 244 HRDPESVGLG 273
           HRD + V LG
Sbjct: 82  HRDVQKVQLG 91


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/67 (49%), Positives = 42/67 (62%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGSRGPAKHRD 252
           WT+D+V + L SIP  FF SPRS+GRQ+   RHRSPL+QR L  E +         ++RD
Sbjct: 40  WTTDSVSEVLRSIPRLFFQSPRSIGRQK-GFRHRSPLKQRNLYQEPNKF------HRYRD 92

Query: 253 PESVGLG 273
           P  V LG
Sbjct: 93  PHKVKLG 99


>emb|CBI15606.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/67 (49%), Positives = 42/67 (62%)
 Frame = +1

Query: 73  WTSDAVRDALSSIPTYFFLSPRSVGRQRTSGRHRSPLRQRCLRLESSSSAGSRGPAKHRD 252
           WT+D+V + L SIP  FF SPRS+GRQ+   RHRSPL+QR L  E +         ++RD
Sbjct: 40  WTTDSVSEVLRSIPRLFFQSPRSIGRQK-GFRHRSPLKQRNLYQEPNKF------HRYRD 92

Query: 253 PESVGLG 273
           P  V LG
Sbjct: 93  PHKVKLG 99