BLASTX nr result
ID: Zingiber23_contig00034017
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00034017
(386 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK23722.1| unknown [Picea sitchensis] 60 2e-07
ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like... 59 7e-07
ref|XP_002445081.1| hypothetical protein SORBIDRAFT_07g003840 [S... 59 9e-07
ref|XP_004987312.1| PREDICTED: 60S ribosomal protein L18a-1-like... 57 3e-06
gb|AFW76725.1| hypothetical protein ZEAMMB73_624022 [Zea mays] 57 3e-06
gb|AFW76724.1| hypothetical protein ZEAMMB73_624022 [Zea mays] 57 3e-06
ref|NP_001057602.2| Os06g0359400 [Oryza sativa Japonica Group] g... 57 3e-06
ref|XP_006841638.1| hypothetical protein AMTR_s00003p00234550 [A... 56 4e-06
gb|ABR18279.1| unknown [Picea sitchensis] 56 4e-06
dbj|BAJ94702.1| predicted protein [Hordeum vulgare subsp. vulgare] 55 7e-06
gb|AFW83500.1| hypothetical protein ZEAMMB73_680171 [Zea mays] 55 1e-05
>gb|ABK23722.1| unknown [Picea sitchensis]
Length = 153
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 232 YNIAVGY-QPHPYPAVVNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
Y GY P YP VV + +E LP CGIG+GWALF+ GFF ASIPW
Sbjct: 57 YQAVPGYPSPQVYPPVVEADVVPVRERRLPCCGIGLGWALFIIGFFLASIPW 108
>ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like [Cucumis sativus]
gi|449524020|ref|XP_004169021.1| PREDICTED: 60S
ribosomal protein L18a-1-like [Cucumis sativus]
Length = 153
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +1
Query: 229 HYNIAVGYQPHPYPAVVNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
HY A GYQ P A+V G + +EP LP CGIGIGW LF+ GFF A+IPW
Sbjct: 61 HY--AHGYQAVPGYAIVEGRPV--REPRLPCCGIGIGWFLFIIGFFLAAIPW 108
>ref|XP_002445081.1| hypothetical protein SORBIDRAFT_07g003840 [Sorghum bicolor]
gi|241941431|gb|EES14576.1| hypothetical protein
SORBIDRAFT_07g003840 [Sorghum bicolor]
Length = 164
Score = 58.5 bits (140), Expect = 9e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 274 VVNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
VV + +EPPLPFCG+GIGW LF+ GFF A+IPW
Sbjct: 83 VVEAEGVPVREPPLPFCGVGIGWFLFLLGFFLAAIPW 119
>ref|XP_004987312.1| PREDICTED: 60S ribosomal protein L18a-1-like [Setaria italica]
Length = 156
Score = 57.0 bits (136), Expect = 3e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 301 KEPPLPFCGIGIGWALFVAGFFFASIPW 384
+EPPLPFCG+GIGW LF+ GFF A+IPW
Sbjct: 84 REPPLPFCGVGIGWFLFLLGFFLAAIPW 111
>gb|AFW76725.1| hypothetical protein ZEAMMB73_624022 [Zea mays]
Length = 161
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 277 VNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
V GI + +EPPLPFCG+G+GW LF+ GFF A+IPW
Sbjct: 83 VEGIPV--REPPLPFCGVGVGWFLFLLGFFLAAIPW 116
>gb|AFW76724.1| hypothetical protein ZEAMMB73_624022 [Zea mays]
Length = 149
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 277 VNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
V GI + +EPPLPFCG+G+GW LF+ GFF A+IPW
Sbjct: 83 VEGIPV--REPPLPFCGVGVGWFLFLLGFFLAAIPW 116
>ref|NP_001057602.2| Os06g0359400 [Oryza sativa Japonica Group]
gi|222635550|gb|EEE65682.1| hypothetical protein
OsJ_21300 [Oryza sativa Japonica Group]
gi|255677033|dbj|BAF19516.2| Os06g0359400 [Oryza sativa
Japonica Group]
Length = 156
Score = 56.6 bits (135), Expect = 3e-06
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +1
Query: 274 VVNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
+V G+ + +EPPLPFCGIG+GW LF+ GFF A++PW
Sbjct: 77 LVEGVPI--REPPLPFCGIGLGWILFLLGFFLAALPW 111
>ref|XP_006841638.1| hypothetical protein AMTR_s00003p00234550 [Amborella trichopoda]
gi|548843659|gb|ERN03313.1| hypothetical protein
AMTR_s00003p00234550 [Amborella trichopoda]
Length = 187
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +1
Query: 247 GYQPHP-YPAVVNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
GYQ P Y V G + +EP LP CGIG+GW LF+AGFF A+IPW
Sbjct: 48 GYQTVPGYATVAEGQPI--REPRLPCCGIGLGWFLFIAGFFLATIPW 92
>gb|ABR18279.1| unknown [Picea sitchensis]
Length = 151
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 232 YNIAVGY-QPHPYPAVVNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
Y GY P YP VV + +E LP CGIG+GWALF+ GFF ASIPW
Sbjct: 57 YQAVPGYPSPQVYPPVVEADVV--RERRLPCCGIGLGWALFIIGFFLASIPW 106
>dbj|BAJ94702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 55.5 bits (132), Expect = 7e-06
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +1
Query: 301 KEPPLPFCGIGIGWALFVAGFFFASIPW 384
+EP LPFCG+G+GWALF+ GFF A+IPW
Sbjct: 79 REPRLPFCGVGVGWALFLLGFFLAAIPW 106
>gb|AFW83500.1| hypothetical protein ZEAMMB73_680171 [Zea mays]
Length = 183
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +1
Query: 232 YNIAVGYQPHPYPAVVNGISMNTKEPPLPFCGIGIGWALFVAGFFFASIPW 384
Y IA GY P VV G + + PLP CG+G+GW LF+ GFFFA+IPW
Sbjct: 94 YQIAQGYIP-----VVEGRPVRIR--PLPCCGLGMGWFLFIIGFFFAAIPW 137