BLASTX nr result
ID: Zingiber23_contig00033866
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00033866
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT24741.1| hypothetical protein F775_26325 [Aegilops tauschii] 55 4e-08
ref|NP_001141683.1| hypothetical protein [Zea mays] gi|194705538... 55 9e-08
ref|XP_003571947.1| PREDICTED: F-box/LRR-repeat protein At3g4888... 53 2e-07
gb|EEC67261.1| hypothetical protein OsI_34223 [Oryza sativa Indi... 54 2e-07
ref|XP_004982688.1| PREDICTED: F-box/LRR-repeat protein At3g4888... 55 3e-07
ref|XP_006661926.1| PREDICTED: F-box/LRR-repeat protein At3g4888... 54 8e-07
ref|NP_001064994.1| Os10g0502900 [Oryza sativa Japonica Group] g... 52 8e-07
ref|XP_002464418.1| hypothetical protein SORBIDRAFT_01g017830 [S... 52 1e-06
>gb|EMT24741.1| hypothetical protein F775_26325 [Aegilops tauschii]
Length = 321
Score = 54.7 bits (130), Expect(2) = 4e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR WRLA SD IW TLD G LKSNFIQ A P
Sbjct: 34 VSQVCRLWRLACSDPLIWGTLDFGLLKSNFIQTRASP 70
Score = 28.1 bits (61), Expect(2) = 4e-08
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 141 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 22
+IWVD RSD+RL K + + S + N IFH+
Sbjct: 71 YIWVDDRSDKRL------AKILRVAMAISRGNVNCMIFHY 104
>ref|NP_001141683.1| hypothetical protein [Zea mays] gi|194705538|gb|ACF86853.1| unknown
[Zea mays] gi|414870842|tpg|DAA49399.1| TPA:
hypothetical protein ZEAMMB73_662744 [Zea mays]
gi|414870843|tpg|DAA49400.1| TPA: hypothetical protein
ZEAMMB73_662744 [Zea mays]
Length = 348
Score = 54.7 bits (130), Expect(2) = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR WRLA SD IW TLD G LKSNFIQ A P
Sbjct: 61 VSQVCRLWRLACSDPLIWGTLDFGLLKSNFIQTRASP 97
Score = 26.9 bits (58), Expect(2) = 9e-08
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 141 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 22
+IWVD RSDRRL + + + S + N IFH+
Sbjct: 98 YIWVDDRSDRRL------ARILRVAMAISCGNVNCMIFHY 131
>ref|XP_003571947.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Brachypodium
distachyon]
Length = 401
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR WR+A +D IW TLD G LKSNFIQ A P
Sbjct: 114 VSQVCRLWRMACADPLIWGTLDFGLLKSNFIQTRASP 150
Score = 28.1 bits (61), Expect(2) = 2e-07
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 141 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 22
+IWVD RSD+RL K + + S + N IFH+
Sbjct: 151 YIWVDERSDKRL------AKILRLAVAISLGNVNCMIFHY 184
>gb|EEC67261.1| hypothetical protein OsI_34223 [Oryza sativa Indica Group]
Length = 321
Score = 53.9 bits (128), Expect(2) = 2e-07
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR WRLA SD IW+TLD G LKSN+IQ A P
Sbjct: 34 VSQVCRLWRLACSDPLIWSTLDFGLLKSNYIQTRASP 70
Score = 26.6 bits (57), Expect(2) = 2e-07
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 141 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 22
+IWVD RSD+RL+ ++ I + N S IFH+
Sbjct: 71 YIWVDDRSDKRLSRILRVA----MSISYGNVS--CLIFHY 104
>ref|XP_004982688.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Setaria
italica]
Length = 321
Score = 54.7 bits (130), Expect(2) = 3e-07
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR WRLA SD IW TLD G LKSNFIQ A P
Sbjct: 34 VSQVCRLWRLACSDPLIWGTLDFGLLKSNFIQTRASP 70
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 141 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 22
+IWVD RSD+RL + + + S + N IFH+
Sbjct: 71 YIWVDDRSDKRL------ARILRVAMAVSCGNVNCMIFHY 104
>ref|XP_006661926.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Oryza
brachyantha]
Length = 321
Score = 53.9 bits (128), Expect(2) = 8e-07
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR WRLA SD IW+TLD G LKSN+IQ A P
Sbjct: 34 VSQVCRLWRLACSDPLIWSTLDFGLLKSNYIQTRASP 70
Score = 24.6 bits (52), Expect(2) = 8e-07
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 141 FIWVDARSDRRL 106
+IWVD RSD+RL
Sbjct: 71 YIWVDDRSDKRL 82
>ref|NP_001064994.1| Os10g0502900 [Oryza sativa Japonica Group]
gi|78708871|gb|ABB47846.1| F-box domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113639603|dbj|BAF26908.1| Os10g0502900 [Oryza sativa
Japonica Group] gi|125575319|gb|EAZ16603.1| hypothetical
protein OsJ_32075 [Oryza sativa Japonica Group]
gi|215700973|dbj|BAG92397.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 321
Score = 52.0 bits (123), Expect(2) = 8e-07
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR W LA SD IW+TLD G LKSN+IQ A P
Sbjct: 34 VSQVCRLWHLACSDPLIWSTLDFGLLKSNYIQTRASP 70
Score = 26.6 bits (57), Expect(2) = 8e-07
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 141 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 22
+IWVD RSD+RL+ ++ I + N S IFH+
Sbjct: 71 YIWVDDRSDKRLSRILRVA----MSISYGNVS--CLIFHY 104
>ref|XP_002464418.1| hypothetical protein SORBIDRAFT_01g017830 [Sorghum bicolor]
gi|241918272|gb|EER91416.1| hypothetical protein
SORBIDRAFT_01g017830 [Sorghum bicolor]
Length = 173
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 25/37 (67%), Positives = 25/37 (67%)
Frame = -1
Query: 251 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 141
VS VCR WR A SD IW TLD G LKSNFIQ A P
Sbjct: 35 VSQVCRLWRSACSDPLIWGTLDFGLLKSNFIQTRASP 71
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 141 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 22
+IWVD RSD+RL + + + S + N IFH+
Sbjct: 72 YIWVDDRSDKRL------ARILRVAMAISCGNVNCMIFHY 105