BLASTX nr result

ID: Zingiber23_contig00033778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00033778
         (518 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...    56   6e-06
ref|XP_002316728.2| hypothetical protein POPTR_0011s02650g [Popu...    55   1e-05

>ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
           gi|449527335|ref|XP_004170667.1| PREDICTED:
           phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
          Length = 521

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/61 (49%), Positives = 39/61 (63%)
 Frame = +3

Query: 6   VFHKRASKLLYKRKSRRGIVGTTSIYHYFELCGVQEPLIVGVAYIVSFILALVAGYVGLI 185
           V+ K  +KL     + R I      +H+ ELCG++EP IV  AY +S ILAL+AGYVGLI
Sbjct: 463 VYFKMTTKL---EGAGRHIFQMVPFHHHLELCGIKEPFIVAGAYTISSILALLAGYVGLI 519

Query: 186 S 188
           S
Sbjct: 520 S 520


>ref|XP_002316728.2| hypothetical protein POPTR_0011s02650g [Populus trichocarpa]
           gi|550327440|gb|EEE97340.2| hypothetical protein
           POPTR_0011s02650g [Populus trichocarpa]
          Length = 398

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +3

Query: 78  IYHYFELCGVQEPLIVGVAYIVSFILALVAGYVGLIS 188
           I+H+ ELCG++EP+IV  AY++S +LAL AGYVGLIS
Sbjct: 361 IHHHLELCGLKEPVIVAGAYVISGVLALFAGYVGLIS 397


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