BLASTX nr result
ID: Zingiber23_contig00033769
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00033769
(276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citr... 75 7e-12
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat... 75 9e-12
ref|XP_002314911.1| pentatricopeptide repeat-containing family p... 75 9e-12
ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat... 75 1e-11
ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
gb|EMJ28165.1| hypothetical protein PRUPE_ppa025241mg [Prunus pe... 73 3e-11
gb|EOY01550.1| Pentatricopeptide repeat-containing protein [Theo... 73 4e-11
ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat... 69 6e-10
ref|XP_004509764.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ... 68 1e-09
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat... 67 2e-09
gb|ESW10304.1| hypothetical protein PHAVU_009G197900g [Phaseolus... 65 7e-09
ref|XP_002514567.1| pentatricopeptide repeat-containing protein,... 65 7e-09
ref|XP_006391071.1| hypothetical protein EUTSA_v10019713mg [Eutr... 64 2e-08
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat... 64 3e-08
gb|EPS64639.1| hypothetical protein M569_10140, partial [Genlise... 57 2e-06
ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [A... 57 3e-06
ref|XP_004501200.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Caps... 55 1e-05
>ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citrus clementina]
gi|568861577|ref|XP_006484277.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like [Citrus sinensis]
gi|557540025|gb|ESR51069.1| hypothetical protein
CICLE_v10033304mg [Citrus clementina]
Length = 743
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +2
Query: 71 SNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYARNLF 241
SNHY+SLLKLC + +D LKK+HC I+KTL +TFLSN L+ YS + YAR LF
Sbjct: 5 SNHYASLLKLCCENKDQSQLKKIHCLIIKTLT-DPETFLSNCLVNCYSKVGNIKYARRLF 63
Query: 242 DQILHPNPFSW 274
D++ PN FSW
Sbjct: 64 DKMAQPNLFSW 74
>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
unnamed protein product [Vitis vinifera]
Length = 743
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
S SN+Y+SLLKLC ++++ KKLHC ILKT+ +TFLSNNLIT+Y L YA
Sbjct: 2 SSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQP-ETFLSNNLITAYYKLGNLAYAH 60
Query: 233 NLFDQILHPNPFSW 274
++FD I PN FSW
Sbjct: 61 HVFDHIPQPNLFSW 74
>ref|XP_002314911.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222863951|gb|EEF01082.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 743
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
S SN+YSSLLKLC + R+ KKLHC I+K+L +TFL NNLI +YS + YAR
Sbjct: 2 SNSSNYYSSLLKLCCETRNQTQAKKLHCLIIKSLTNP-ETFLYNNLINAYSKLGNITYAR 60
Query: 233 NLFDQILHPNPFSW 274
++FD++ PN FSW
Sbjct: 61 HVFDKMPQPNSFSW 74
>ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Solanum lycopersicum]
Length = 743
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
S +SNHY S+LKL Q+++ +KKLHCFILKT+ +TFL NNLI +YS + YAR
Sbjct: 2 SHISNHYCSMLKLWCQSQNQNQIKKLHCFILKTI-ANPETFLLNNLINAYSKLNNTGYAR 60
Query: 233 NLFDQILHPNPFSW 274
+F++I PN FSW
Sbjct: 61 QVFEEIPQPNQFSW 74
>ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Solanum tuberosum]
Length = 746
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
S +SNHY SLLKL ++++ +KKLHCFILKT+ +TFL NNLI +YS + YAR
Sbjct: 5 SHISNHYCSLLKLWCESQNQNQIKKLHCFILKTI-ANPETFLLNNLINAYSKLNNTGYAR 63
Query: 233 NLFDQILHPNPFSW 274
+F++I PN FSW
Sbjct: 64 QVFEEIPQPNQFSW 77
>gb|EMJ28165.1| hypothetical protein PRUPE_ppa025241mg [Prunus persica]
Length = 743
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Frame = +2
Query: 71 SNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYARNLF 241
SN+Y +LLKLC QA + KKLHC I+KT+ + +TFL NN+IT+Y L YAR++F
Sbjct: 5 SNYYCNLLKLCCQAGNHAQAKKLHCHIIKTV-ASPETFLLNNIITTYGRLGNLRYARHVF 63
Query: 242 DQILHPNPFSW 274
DQ+ HP FSW
Sbjct: 64 DQMPHPTLFSW 74
>gb|EOY01550.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 800
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +2
Query: 71 SNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYARNLF 241
SN+Y SLLK+C++ R+ K++HC ILKT +TFL NNL+ +YS L YAR +F
Sbjct: 62 SNYYCSLLKICTETRNRTQAKRIHCHILKTFK-DPETFLLNNLVNAYSKLGDLTYARYVF 120
Query: 242 DQILHPNPFSW 274
D+IL PN FSW
Sbjct: 121 DRILRPNLFSW 131
>ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Fragaria vesca subsp. vesca]
Length = 743
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
S SNHY +LLKLC Q+ + K +H I++TL + +TFL NNLIT+Y L YAR
Sbjct: 2 SASSNHYCNLLKLCCQSGNHSQAKTIHSHIIRTLP-SPETFLLNNLITTYGKLGNLKYAR 60
Query: 233 NLFDQILHPNPFSW 274
++FDQI HPN FS+
Sbjct: 61 HVFDQIPHPNLFSY 74
>ref|XP_004509764.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like isoform X1 [Cicer arietinum]
gi|502154626|ref|XP_004509765.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like isoform X2 [Cicer arietinum]
Length = 744
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = +2
Query: 71 SNHYSSLLKLCSQARDL---KKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYARNLF 241
SNHY +LLKLC ++R+ K LH I+K++ +TFL NNLI+SY+ + YAR +F
Sbjct: 6 SNHYCTLLKLCCESRNFNNAKNLHSHIIKSIPNP-ETFLLNNLISSYAKLGSITYARRVF 64
Query: 242 DQILHPNPFSW 274
D+I HP +SW
Sbjct: 65 DEIPHPTLYSW 75
>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 748
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLCSQARDL---KKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
S SNHY +LLKLC + + K LH I+KTL +TFL NNLI+SY+ + YA
Sbjct: 6 SSSSNHYCALLKLCCETHNFTKAKNLHSHIIKTLPYP-ETFLLNNLISSYAKLGSIPYAC 64
Query: 233 NLFDQILHPNPFSW 274
+FDQ+ HPN +SW
Sbjct: 65 KVFDQMPHPNLYSW 78
>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
S SN+Y++ LK C +AR+ +KKLHC I++TL +TFL NNLI +Y L AR
Sbjct: 2 SSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNP-ETFLYNNLINTYGKLGDLKNAR 60
Query: 233 NLFDQILHPNPFSW 274
N+FD I PN FSW
Sbjct: 61 NVFDHIPQPNLFSW 74
>gb|ESW10304.1| hypothetical protein PHAVU_009G197900g [Phaseolus vulgaris]
Length = 747
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +2
Query: 68 LSNHYSSLLKLCSQARDLKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYARNLFDQ 247
LSNHY LLK C RD KK+HC I+K +TFL NNL+ +Y+ ++YAR +FDQ
Sbjct: 14 LSNHYCELLKHC---RDTKKVHCNIIKAFQNP-ETFLLNNLVNAYAKLGSIIYARRVFDQ 69
Query: 248 ILHPNPFSW 274
+ N +SW
Sbjct: 70 MPQRNLYSW 78
>ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546171|gb|EEF47673.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 515
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = +2
Query: 53 FMTSRLSNHYSSLLKLCSQARD---LKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLV 223
+ S SN YSSLLK C + R+ KKLHC I+KTL + FL NNL+ +Y +
Sbjct: 2 YKMSSSSNQYSSLLKFCCETRNQSQAKKLHCHIIKTL-ANPEPFLYNNLMNAYGKLGNIA 60
Query: 224 YARNLFDQILHPNPFSW 274
YAR+LFD + N FSW
Sbjct: 61 YARHLFDGMPQRNSFSW 77
>ref|XP_006391071.1| hypothetical protein EUTSA_v10019713mg [Eutrema salsugineum]
gi|557087505|gb|ESQ28357.1| hypothetical protein
EUTSA_v10019713mg [Eutrema salsugineum]
Length = 743
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Frame = +2
Query: 71 SNHYSSLLKLC------SQARDLKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
SN+YS+ +K C SQ+R LK +H I+KTL + +T L NN++ Y+ YAR
Sbjct: 3 SNYYSAQIKQCIESGARSQSRHLKTIHGHIIKTLSIV-ETILLNNIVHGYAKTRNSTYAR 61
Query: 233 NLFDQILHPNPFSW 274
+FD+I PNPFSW
Sbjct: 62 RVFDEIPKPNPFSW 75
>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like isoform X1 [Glycine max]
gi|571497773|ref|XP_006594017.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like isoform X2 [Glycine max]
Length = 747
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 53 FMTSRLSNHYSSLLKLCSQARDLKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
F + LSNHY LLK C RD KK+HC I+K + FL NNL+++Y+ + YAR
Sbjct: 9 FNSMSLSNHYCELLKHC---RDTKKIHCHIIKAFRNP-EIFLLNNLVSAYAKFDRITYAR 64
Query: 233 NLFDQILHPNPFSW 274
+FDQ+ N +SW
Sbjct: 65 RVFDQMPQRNLYSW 78
>gb|EPS64639.1| hypothetical protein M569_10140, partial [Genlisea aurea]
Length = 737
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 80 YSSLLKLCSQARDL---KKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYARNLFDQI 250
Y S LK C + + L K+LH +++TL+ +TFL NN ++SY + YAR +FDQI
Sbjct: 1 YFSWLKQCCEDKSLNRVKQLHGRVIRTLETP-ETFLLNNFVSSYGKMESIEYARKMFDQI 59
Query: 251 LHPNPFSW 274
PN FSW
Sbjct: 60 PRPNVFSW 67
>ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [Amborella trichopoda]
gi|548846522|gb|ERN05798.1| hypothetical protein
AMTR_s00006p00257020 [Amborella trichopoda]
Length = 965
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 SRLSNHYSSLLKLC---SQARDLKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
+ LS SSLLK S+ KKLHC ILKT++ DTF++NNLI Y+ L YAR
Sbjct: 420 TNLSALLSSLLKQLPDPSKPHHGKKLHCLILKTVENT-DTFVTNNLINLYAKSWNLSYAR 478
Query: 233 NLFDQILHPNPFSW 274
+FD++ H N SW
Sbjct: 479 RVFDRMPHKNLISW 492
>ref|XP_004501200.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like isoform X1 [Cicer arietinum]
gi|502132029|ref|XP_004501201.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g20540-like isoform X2 [Cicer arietinum]
gi|502132032|ref|XP_004501202.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g20540-like isoform X3 [Cicer arietinum]
gi|502132034|ref|XP_004501203.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g20540-like isoform X4 [Cicer arietinum]
Length = 553
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +2
Query: 65 RLSNHYSSLLKLCSQARDLKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYARNLFD 244
+L N Y + LK C + LKK+H ++K L L+ FL+ ++ S N + YA LF
Sbjct: 8 QLENRYVASLKSCFRIAQLKKIHAHVVK-LSLSQSNFLATKMLDSCDNMGYVGYATLLFQ 66
Query: 245 QILHPNPFSW 274
Q+LHPN FS+
Sbjct: 67 QLLHPNNFSY 76
>ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Capsella rubella]
gi|482570421|gb|EOA34609.1| hypothetical protein
CARUB_v10022169mg [Capsella rubella]
Length = 743
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Frame = +2
Query: 71 SNHYSSLLKLC------SQARDLKKLHCFILKTLDLAGDTFLSNNLITSYSNRSLLVYAR 232
SN+YS+ +K C +Q+R +K +H I++TL L +TFL NN++ +Y+ YAR
Sbjct: 3 SNYYSAQIKQCIGLGARNQSRHVKMIHGNIIRTL-LHPETFLYNNIVHAYAVVRSSTYAR 61
Query: 233 NLFDQILHPNPFSW 274
+FD I PN FSW
Sbjct: 62 RVFDGIPQPNLFSW 75