BLASTX nr result
ID: Zingiber23_contig00033695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00033695
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-... 100 2e-19
ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-... 92 7e-17
ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citr... 92 7e-17
ref|XP_004494416.1| PREDICTED: DNA mismatch repair protein MSH6-... 91 1e-16
emb|CBI36942.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-... 91 2e-16
emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera] 91 2e-16
ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 90 4e-16
gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis] 89 6e-16
gb|EOX95247.1| MUTS isoform 2 [Theobroma cacao] 89 6e-16
gb|EOX95246.1| MUTS isoform 1 [Theobroma cacao] 89 6e-16
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 89 6e-16
ref|XP_006396405.1| hypothetical protein EUTSA_v10028364mg [Eutr... 89 8e-16
ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-... 89 8e-16
gb|ESW35166.1| hypothetical protein PHAVU_001G212500g [Phaseolus... 87 3e-15
ref|XP_006286904.1| hypothetical protein CARUB_v10000048mg [Caps... 86 4e-15
ref|XP_006286903.1| hypothetical protein CARUB_v10000048mg [Caps... 86 4e-15
ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-... 86 4e-15
gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana] 86 7e-15
ref|NP_192116.1| DNA mismatch repair protein MSH6 [Arabidopsis t... 86 7e-15
>ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-like [Glycine max]
Length = 1273
Score = 100 bits (250), Expect = 2e-19
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
+PPSA+ S + ++++GRRIKV+WPLDK WYEG V SFD+L KH+V YDDGE+E+LDLS+
Sbjct: 76 SPPSASPSLYFQELIGRRIKVYWPLDKAWYEGSVKSFDSLTSKHVVRYDDGEEESLDLSK 135
Query: 182 EKFEWV 199
EK EW+
Sbjct: 136 EKIEWL 141
>ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-like [Citrus sinensis]
Length = 1288
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +2
Query: 8 PSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSREK 187
P+AAKS + EDV+ +RI+V+WPLDK WYEG V SFD KHLV YDDGEDE LDL +EK
Sbjct: 95 PAAAKS-YGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEK 153
Query: 188 FEWV 199
EWV
Sbjct: 154 IEWV 157
>ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citrus clementina]
gi|557546745|gb|ESR57723.1| hypothetical protein
CICLE_v10018525mg [Citrus clementina]
Length = 1288
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +2
Query: 8 PSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSREK 187
P+AAKS + EDV+ +RI+V+WPLDK WYEG V SFD KHLV YDDGEDE LDL +EK
Sbjct: 95 PAAAKS-YGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEK 153
Query: 188 FEWV 199
EWV
Sbjct: 154 IEWV 157
>ref|XP_004494416.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cicer arietinum]
Length = 1301
Score = 91.3 bits (225), Expect = 1e-16
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +2
Query: 8 PSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSREK 187
PS + S F++ V+G+RIKV+WP+D WYEG V SFD L KH + YDD E+E++DLS+EK
Sbjct: 86 PSPSPSPFADQVIGKRIKVYWPIDDAWYEGFVKSFDKLTSKHRIHYDDDEEESIDLSKEK 145
Query: 188 FEWV 199
FEW+
Sbjct: 146 FEWI 149
>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
TP + +KS + E+VV RR+KV+WPLDK WY G V SFD L G+HLV YDD ++ETLDL +
Sbjct: 54 TPVTGSKS-YGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLGK 112
Query: 182 EKFEWV 199
EK EWV
Sbjct: 113 EKIEWV 118
>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
TP + +KS + E+VV RR+KV+WPLDK WY G V SFD L G+HLV YDD ++ETLDL +
Sbjct: 84 TPVTGSKS-YGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLGK 142
Query: 182 EKFEWV 199
EK EWV
Sbjct: 143 EKIEWV 148
>emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
TP + +KS + E+VV RR+KV+WPLDK WY G V SFD L G+HLV YDD ++ETLDL +
Sbjct: 92 TPVTGSKS-YGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLGK 150
Query: 182 EKFEWV 199
EK EWV
Sbjct: 151 EKIEWV 156
>ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
tuberosum]
Length = 1308
Score = 89.7 bits (221), Expect = 4e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2
Query: 20 KSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSREKFEWV 199
K + ++VV +R+KV+WPLDK+WYEG V SFD+ G+HLV YDDG++E +DLS EK EWV
Sbjct: 91 KPSYGQEVVDKRVKVYWPLDKIWYEGCVKSFDSSSGEHLVKYDDGDEEMIDLSEEKIEWV 150
>gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis]
Length = 1302
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/62 (61%), Positives = 50/62 (80%)
Frame = +2
Query: 14 AAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSREKFE 193
A++ E+VVG+RIKV+WPLDK WYEG V SFD GKHLV YDDGE+E+++L++EK E
Sbjct: 98 ASEKFHGEEVVGKRIKVYWPLDKSWYEGFVRSFDKDSGKHLVQYDDGEEESVELAKEKIE 157
Query: 194 WV 199
W+
Sbjct: 158 WI 159
>gb|EOX95247.1| MUTS isoform 2 [Theobroma cacao]
Length = 1118
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
TP + A + ++VV +RI+V+WPLDK WYEG V SFD G+HLV YDD E+E LDL +
Sbjct: 86 TPSTPADKSYGKEVVDKRIRVYWPLDKAWYEGVVKSFDKESGRHLVQYDDAEEEELDLGK 145
Query: 182 EKFEWV 199
EK EW+
Sbjct: 146 EKIEWI 151
>gb|EOX95246.1| MUTS isoform 1 [Theobroma cacao]
Length = 1316
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
TP + A + ++VV +RI+V+WPLDK WYEG V SFD G+HLV YDD E+E LDL +
Sbjct: 86 TPSTPADKSYGKEVVDKRIRVYWPLDKAWYEGVVKSFDKESGRHLVQYDDAEEEELDLGK 145
Query: 182 EKFEWV 199
EK EW+
Sbjct: 146 EKIEWI 151
>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = +2
Query: 5 PPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSRE 184
P K + ++VV +R+KV+WPLDK WYEG V SFD+ GKHLV YDDGE+E ++L+ E
Sbjct: 75 PTLVLKKSYGQEVVDKRVKVYWPLDKNWYEGFVKSFDSASGKHLVEYDDGEEEMIELAEE 134
Query: 185 KFEWV 199
K EWV
Sbjct: 135 KIEWV 139
>ref|XP_006396405.1| hypothetical protein EUTSA_v10028364mg [Eutrema salsugineum]
gi|557097422|gb|ESQ37858.1| hypothetical protein
EUTSA_v10028364mg [Eutrema salsugineum]
Length = 1336
Score = 88.6 bits (218), Expect = 8e-16
Identities = 34/65 (52%), Positives = 54/65 (83%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
+PP +A + + ++VVG++++V+WPLDK WY+G V+S++ +GKH+V YDDGE+E+LDL +
Sbjct: 111 SPPKSAGNTYGDEVVGKQVRVYWPLDKKWYDGIVTSYNKGEGKHVVEYDDGEEESLDLGK 170
Query: 182 EKFEW 196
EK EW
Sbjct: 171 EKIEW 175
>ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
lycopersicum]
Length = 1312
Score = 88.6 bits (218), Expect = 8e-16
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +2
Query: 20 KSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSREKFEWV 199
K + ++VV +R+KV+WPLDK+WYEG V SFD+ G+HLV YDDG++E +DL+ EK EWV
Sbjct: 94 KPSYGQEVVDKRVKVYWPLDKIWYEGCVKSFDSSSGEHLVKYDDGDEEMIDLAEEKIEWV 153
>gb|ESW35166.1| hypothetical protein PHAVU_001G212500g [Phaseolus vulgaris]
Length = 1291
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY-DDGEDETLDLS 178
+PPSA+ S + ++VVG+RIKV+WPLDK WYEG + SFD KH+V Y DD E+E+L+LS
Sbjct: 80 SPPSASSSLYGKEVVGQRIKVYWPLDKAWYEGSIISFDKNTSKHVVRYFDDEEEESLNLS 139
Query: 179 REKFEWV 199
EK EW+
Sbjct: 140 EEKIEWL 146
>ref|XP_006286904.1| hypothetical protein CARUB_v10000048mg [Capsella rubella]
gi|482555610|gb|EOA19802.1| hypothetical protein
CARUB_v10000048mg [Capsella rubella]
Length = 1325
Score = 86.3 bits (212), Expect = 4e-15
Identities = 34/66 (51%), Positives = 53/66 (80%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
+PP +A+ + ++VVGR+++V+WPLDK WY+G V+ +D GKH+V Y+DGE+E+LDL +
Sbjct: 109 SPPLSAEIKYGDEVVGRQVRVYWPLDKRWYDGSVTFYDKGVGKHVVEYEDGEEESLDLGK 168
Query: 182 EKFEWV 199
EK EW+
Sbjct: 169 EKIEWM 174
>ref|XP_006286903.1| hypothetical protein CARUB_v10000048mg [Capsella rubella]
gi|482555609|gb|EOA19801.1| hypothetical protein
CARUB_v10000048mg [Capsella rubella]
Length = 1325
Score = 86.3 bits (212), Expect = 4e-15
Identities = 34/66 (51%), Positives = 53/66 (80%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
+PP +A+ + ++VVGR+++V+WPLDK WY+G V+ +D GKH+V Y+DGE+E+LDL +
Sbjct: 109 SPPLSAEIKYGDEVVGRQVRVYWPLDKRWYDGSVTFYDKGVGKHVVEYEDGEEESLDLGK 168
Query: 182 EKFEWV 199
EK EW+
Sbjct: 169 EKIEWM 174
>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +2
Query: 8 PSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSREK 187
P A + + V+G++IKV+WPLDK WYEGRV FD GKHLV YDD E+E L L EK
Sbjct: 87 PDAEEKSHGDGVIGKKIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEEELLVLGNEK 146
Query: 188 FEWV 199
EWV
Sbjct: 147 IEWV 150
>gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]
Length = 1362
Score = 85.5 bits (210), Expect = 7e-15
Identities = 33/66 (50%), Positives = 52/66 (78%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
+PP + + ++VVG++++V+WPLDK WY+G V+ +D +GKH+V Y+DGE+E+LDL +
Sbjct: 111 SPPQSVVITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGK 170
Query: 182 EKFEWV 199
EK EWV
Sbjct: 171 EKTEWV 176
>ref|NP_192116.1| DNA mismatch repair protein MSH6 [Arabidopsis thaliana]
gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA
mismatch repair protein MSH6; Short=AtMSH6; AltName:
Full=MutS protein homolog 6 gi|3912921|gb|AAC78699.1|
G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein
msh6-1 [Arabidopsis thaliana] gi|7268591|emb|CAB80700.1|
G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|332656719|gb|AEE82119.1| DNA mismatch repair protein
MSH6 [Arabidopsis thaliana]
Length = 1324
Score = 85.5 bits (210), Expect = 7e-15
Identities = 33/66 (50%), Positives = 52/66 (78%)
Frame = +2
Query: 2 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDETLDLSR 181
+PP + + ++VVG++++V+WPLDK WY+G V+ +D +GKH+V Y+DGE+E+LDL +
Sbjct: 111 SPPQSVVITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGK 170
Query: 182 EKFEWV 199
EK EWV
Sbjct: 171 EKTEWV 176