BLASTX nr result

ID: Zingiber23_contig00032833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00032833
         (211 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004244714.1| PREDICTED: putative DNA-binding protein ESCA...    58   1e-06
gb|EOX96189.1| AT-hook motif nuclear-localized protein 22 [Theob...    55   1e-05

>ref|XP_004244714.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Solanum
           lycopersicum]
          Length = 303

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = -2

Query: 159 SPAAMMGQSPPPHQQQLLDGNPSLLHGLPANLLNNVQLPADPYSWATG 16
           SP A +    P HQQ L  G+PSL HG+P NLLNNVQLP++ Y WATG
Sbjct: 255 SPGATVAPGGPQHQQLL--GDPSLFHGMPPNLLNNVQLPSEAY-WATG 299


>gb|EOX96189.1| AT-hook motif nuclear-localized protein 22 [Theobroma cacao]
          Length = 326

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
 Frame = -2

Query: 159 SPAAMMGQSP----PPHQQQLL-DGNPSLLHGLPANLLNNVQLPADPYSWATG 16
           SP++M+GQ      PP QQQLL D N S + GLP NLLN+VQLPA+ Y W TG
Sbjct: 271 SPSSMVGQQQQQQQPPQQQQLLQDPNGSFVQGLPPNLLNSVQLPAEAY-WGTG 322


Top