BLASTX nr result
ID: Zingiber23_contig00032540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00032540
(1006 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containi... 300 4e-79
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera] 300 4e-79
gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus... 290 8e-76
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi... 288 2e-75
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr... 288 3e-75
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi... 288 3e-75
gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis] 286 7e-75
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p... 286 7e-75
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi... 285 1e-74
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ... 285 2e-74
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ... 285 3e-74
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi... 282 1e-73
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 281 2e-73
ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containi... 281 4e-73
ref|XP_002306437.1| pentatricopeptide repeat-containing family p... 277 5e-72
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 273 6e-71
gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus pe... 272 2e-70
ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containi... 271 2e-70
ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [A... 271 4e-70
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr... 270 7e-70
>ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like, partial [Vitis vinifera]
Length = 253
Score = 300 bits (769), Expect = 4e-79
Identities = 141/220 (64%), Positives = 171/220 (77%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC GKNLREATRLL +L +AGFKPDCY+YN IMKGYC++D+ E + VY KMK+EG++
Sbjct: 28 DNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVE 87
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK+G + +A+KFL+IMAEMGHFPD VTYTSLMNGLCR
Sbjct: 88 PDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALAL 147
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL GLCK + L ++LY VM + GMKLE ASYATF+R LC+
Sbjct: 148 LEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCK 207
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++AEAYE FDY ++SKS DVTAY LE+SLK L K +
Sbjct: 208 EGRVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAR 247
Score = 73.6 bits (179), Expect = 1e-10
Identities = 43/158 (27%), Positives = 69/158 (43%)
Frame = +3
Query: 177 IQPDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXX 356
++PDLVT+ L+ + L +A + L ++ E G PD Y ++M G C
Sbjct: 16 LKPDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAI 75
Query: 357 XXXXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTL 536
+M+E+G P+ TYNTL+ GL K+ + A + +M G + +Y + M L
Sbjct: 76 GVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGL 135
Query: 537 CRANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSL 650
CR A + + S + Y L L L
Sbjct: 136 CREGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKL 173
>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 300 bits (769), Expect = 4e-79
Identities = 141/220 (64%), Positives = 171/220 (77%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC GKNLREATRLL +L +AGFKPDCY+YN IMKGYC++D+ E + VY KMK+EG++
Sbjct: 247 DNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVE 306
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK+G + +A+KFL+IMAEMGHFPD VTYTSLMNGLCR
Sbjct: 307 PDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALAL 366
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL GLCK + L ++LY VM + GMKLE ASYATF+R LC+
Sbjct: 367 LEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCK 426
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++AEAYE FDY ++SKS DVTAY LE+SLK L K +
Sbjct: 427 EGRVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAR 466
Score = 86.7 bits (213), Expect = 1e-14
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 1/216 (0%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQ 182
++C A L+ LS PD + YN I++ C V +++++ ++
Sbjct: 177 SLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLK 236
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+ L+ + L +A + L ++ E G PD Y ++M G C
Sbjct: 237 PDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGV 296
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E+G P+ TYNTL+ GL K+ + A + +M G + +Y + M LCR
Sbjct: 297 YKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCR 356
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSL 650
A + + S + Y L L L
Sbjct: 357 EGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKL 392
>gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus vulgaris]
Length = 462
Score = 290 bits (741), Expect = 8e-76
Identities = 135/220 (61%), Positives = 169/220 (76%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC GKNLREA RL+S+L + GFKPDC++YN IMKGYC++ + E +EVYNKMK+EG++
Sbjct: 237 DNVCNGKNLREAMRLVSVLHEEGFKPDCFVYNTIMKGYCVLSRGSEAIEVYNKMKEEGVE 296
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK+G + +AKK L +MAE G+FPD VTYT+LMNG+CR
Sbjct: 297 PDLVTYNTLIFGLSKSGRVVEAKKLLRVMAEKGYFPDEVTYTTLMNGMCRKGEVLAALAL 356
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PNECTYNTLL GLCKA+ L A++ Y V+ G+K + ASY TF+R LCR
Sbjct: 357 LGEMEGKGCSPNECTYNTLLHGLCKARLLEKAIEFYGVIKEGGLKFDTASYGTFVRALCR 416
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++AEAYEVFDYA++SKS TDV AY LES+LK L K K
Sbjct: 417 DGRVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAK 456
Score = 101 bits (251), Expect = 5e-19
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQ 182
A+C +L A L++ + PD Y +N ++K C V + ++M+++ G++
Sbjct: 167 ALCSAGHLDHAIELVNEFASKHCLPDTYTFNFLVKHLCKARALSSVYDFIDEMREKFGVK 226
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+ L+ + L +A + ++++ E G PD Y ++M G C
Sbjct: 227 PDLVTYTILIDNVCNGKNLREAMRLVSVLHEEGFKPDCFVYNTIMKGYCVLSRGSEAIEV 286
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E+G P+ TYNTL+ GL K+ + A +L +VM KG + +Y T M +CR
Sbjct: 287 YNKMKEEGVEPDLVTYNTLIFGLSKSGRVVEAKKLLRVMAEKGYFPDEVTYTTLMNGMCR 346
Query: 543 ANKIAEA 563
++ A
Sbjct: 347 KGEVLAA 353
Score = 85.5 bits (210), Expect = 3e-14
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Frame = +3
Query: 48 LSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGLSK 227
L+ + AG PD +V ++ C +E+ N+ + PD TFN LV L K
Sbjct: 146 LNSMHAAGVTPDAATADVAIRALCSAGHLDHAIELVNEFASKHCLPDTYTFNFLVKHLCK 205
Query: 228 AGMLAQAKKFLNIMAE-MGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEKGCTPNEC 404
A L+ F++ M E G PD+VTYT L++ +C + E+G P+
Sbjct: 206 ARALSSVYDFIDEMREKFGVKPDLVTYTILIDNVCNGKNLREAMRLVSVLHEEGFKPDCF 265
Query: 405 TYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFDYA 584
YNT++ G C S A+++Y M +G++ + +Y T + L ++ ++ EA ++
Sbjct: 266 VYNTIMKGYCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVVEAKKLLRVM 325
Query: 585 IQSKSSTDVTAYRALESSL 641
+ D Y L + +
Sbjct: 326 AEKGYFPDEVTYTTLMNGM 344
Score = 75.5 bits (184), Expect = 3e-11
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 11/197 (5%)
Frame = +3
Query: 72 FKPDCYLYNVIMKGYCMVDQCGE----------VMEVYNKMKDEGIQPDLVTFNTLVFGL 221
F PD +++++ C + + N M G+ PD T + + L
Sbjct: 109 FSPDRSTFHILLSHSCANPNSNSNSSSNSAISAIHQTLNSMHAAGVTPDAATADVAIRAL 168
Query: 222 SKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEK-GCTPN 398
AG L A + +N A PD T+ L+ LC+ EM EK G P+
Sbjct: 169 CSAGHLDHAIELVNEFASKHCLPDTYTFNFLVKHLCKARALSSVYDFIDEMREKFGVKPD 228
Query: 399 ECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFD 578
TY L+ +C K L A++L V+ +G K + Y T M+ C ++ +EA EV++
Sbjct: 229 LVTYTILIDNVCNGKNLREAMRLVSVLHEEGFKPDCFVYNTIMKGYCVLSRGSEAIEVYN 288
Query: 579 YAIQSKSSTDVTAYRAL 629
+ D+ Y L
Sbjct: 289 KMKEEGVEPDLVTYNTL 305
>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Citrus sinensis]
gi|568825365|ref|XP_006467050.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Citrus sinensis]
gi|568825367|ref|XP_006467051.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X3 [Citrus sinensis]
Length = 465
Score = 288 bits (738), Expect = 2e-75
Identities = 137/220 (62%), Positives = 166/220 (75%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREA RL+S LSD+GFKPDC++YN IMKGYC + + GEV+ VYNKMK+EG++
Sbjct: 240 DNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVE 299
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK G + +AKKFL IM E G PD VTYTSLMNG+CR
Sbjct: 300 PDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALAL 359
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL GLCK++ + ++LY+ M G+KLE A+YAT +R LCR
Sbjct: 360 LEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALCR 419
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
K+AEAYEVFDYA++SKS TDV AY LES+LK L K K
Sbjct: 420 HGKVAEAYEVFDYAVESKSLTDVAAYTTLESTLKWLKKAK 459
Score = 80.1 bits (196), Expect = 1e-12
Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Frame = +3
Query: 42 RLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGL 221
+ LSL++ G+ P+ ++ ++ C V++ + +E+ + PD+ T+N LV L
Sbjct: 147 KTLSLMTTNGYPPNQGTTDIAVRSLCSVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCL 206
Query: 222 SKAGMLAQAKKFLNIM-AEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEKGCTPN 398
K L F++ M A +G P++VTYT L++ +C + + G P+
Sbjct: 207 CKCRSLTTVYNFVDQMRASLGIKPNLVTYTILIDNVCNTKNLREAMRLVSALSDSGFKPD 266
Query: 399 ECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFD 578
YNT++ G C + +Y M +G++ + +Y T + L + ++ EA +
Sbjct: 267 CFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNTLIFGLSKCGRVGEAKKFLK 326
Query: 579 YAIQSKSSTDVTAYRALESSL 641
+++ D Y +L + +
Sbjct: 327 IMVEAGFLPDAVTYTSLMNGM 347
Score = 60.8 bits (146), Expect = 8e-07
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 3/193 (1%)
Frame = +3
Query: 60 SDAGFKPDCYLYNVIMKGYCMV--DQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGLSKAG 233
++ F PD Y++++ C + + + + M G P+ T + V L
Sbjct: 116 ANPSFNPDRSTYHILLAQSCQAPDNSFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLCSVN 175
Query: 234 MLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEK-GCTPNECTY 410
L A + + ++ PD+ TY L+ LC+ +M G PN TY
Sbjct: 176 RLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQMRASLGIKPNLVTY 235
Query: 411 NTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFDYAIQ 590
L+ +C K L A++L + G K + Y T M+ C ++ E V++ +
Sbjct: 236 TILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKE 295
Query: 591 SKSSTDVTAYRAL 629
D+ Y L
Sbjct: 296 EGVEPDLVTYNTL 308
>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
gi|557527305|gb|ESR38555.1| hypothetical protein
CICLE_v10025555mg [Citrus clementina]
Length = 465
Score = 288 bits (736), Expect = 3e-75
Identities = 136/220 (61%), Positives = 166/220 (75%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREA RL+S LSD+GFKPDC++YN IMKGYC + + GEV+ VYNKMK+EG++
Sbjct: 240 DNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVE 299
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NT++FGLSK G + +AKKFL IM E G PD VTYTSLMNG+CR
Sbjct: 300 PDLVTYNTMIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALAL 359
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL GLCK++ + ++LY+ M G+KLE A+YAT +R LCR
Sbjct: 360 LEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALCR 419
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
K+AEAYEVFDYA++SKS TDV AY LES+LK L K K
Sbjct: 420 HGKVAEAYEVFDYAVESKSLTDVAAYTTLESTLKWLKKAK 459
Score = 79.3 bits (194), Expect = 2e-12
Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Frame = +3
Query: 42 RLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGL 221
+ LSL++ G+ P+ ++ ++ C V++ + +E+ + PD+ T+N LV L
Sbjct: 147 KTLSLMTTNGYPPNQGTTDIAVRSLCSVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCL 206
Query: 222 SKAGMLAQAKKFLN-IMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEKGCTPN 398
K L F++ + A G P++VTYT L++ +C + + G P+
Sbjct: 207 CKCRSLTTVYNFVDQVRASFGIKPNLVTYTILIDNVCNTKNLREAMRLVSALSDSGFKPD 266
Query: 399 ECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFD 578
YNT++ G C + +Y M +G++ + +Y T + L + ++ EA +
Sbjct: 267 CFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNTMIFGLSKCGRVGEAKKFLK 326
Query: 579 YAIQSKSSTDVTAYRALESSL 641
+++ D Y +L + +
Sbjct: 327 IMVEAGFLPDAVTYTSLMNGM 347
Score = 58.5 bits (140), Expect = 4e-06
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 3/193 (1%)
Frame = +3
Query: 60 SDAGFKPDCYLYNVIMKGYCMV--DQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGLSKAG 233
++ F PD Y++++ C + + + + M G P+ T + V L
Sbjct: 116 ANPSFNPDRSTYHILLAQSCQAPDNSFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLCSVN 175
Query: 234 MLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEK-GCTPNECTY 410
L A + + ++ PD+ TY L+ LC+ ++ G PN TY
Sbjct: 176 RLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQVRASFGIKPNLVTY 235
Query: 411 NTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFDYAIQ 590
L+ +C K L A++L + G K + Y T M+ C ++ E V++ +
Sbjct: 236 TILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKE 295
Query: 591 SKSSTDVTAYRAL 629
D+ Y +
Sbjct: 296 EGVEPDLVTYNTM 308
>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum lycopersicum]
Length = 469
Score = 288 bits (736), Expect = 3e-75
Identities = 135/220 (61%), Positives = 164/220 (74%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREATRLL +LS+ G+KPDCY+YN IMKGYCM+ Q GEV+ VY KM++EG++
Sbjct: 244 DNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVK 303
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL++GLSK+G + AKKFLN+M E GH PD VTYTSLMNG+CR
Sbjct: 304 PDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVAL 363
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+ME +GC PN CTYNTLL GLCK + L ++LY VM G KLE SY TF+R LCR
Sbjct: 364 LEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNGTKLETGSYGTFLRALCR 423
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++A+AYEVFDYAI+SKS TDV AY LES+LK L K +
Sbjct: 424 NGRVADAYEVFDYAIESKSLTDVAAYTTLESTLKWLKKAR 463
Score = 92.8 bits (229), Expect = 2e-16
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Frame = +3
Query: 9 VCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQP 185
+C + +A L+ LS PD Y YN I++ C + +M++ I+P
Sbjct: 175 LCSSGHEEQAIELVKELSSKDSPPDTYTYNFIIRHLCKNRPLSTMNNFIKEMREGFDIKP 234
Query: 186 DLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXX 365
DLVT+ ++ + + L +A + L +++E G+ PD Y ++M G C
Sbjct: 235 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVY 294
Query: 366 XEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E+G P+ TYNTL+ GL K+ + +A + VM+ +G + +Y + M +CR
Sbjct: 295 KKMQEEGVKPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCR 353
Score = 73.9 bits (180), Expect = 9e-11
Identities = 44/207 (21%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Frame = +3
Query: 24 NLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFN 203
+L ++L+L++ GF P+ ++ ++ C + +E+ ++ + PD T+N
Sbjct: 145 SLSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYN 204
Query: 204 TLVFGLSKAGMLAQAKKFLNIMAEMGHF-PDVVTYTSLMNGLCRXXXXXXXXXXXXEMEE 380
++ L K L+ F+ M E PD+VTYT +++ +C + E
Sbjct: 205 FIIRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSE 264
Query: 381 KGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAE 560
+G P+ YNT++ G C + +Y+ M +G+K + +Y T + L ++ ++ +
Sbjct: 265 EGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVKPDLVTYNTLIYGLSKSGRVKD 324
Query: 561 AYEVFDYAIQSKSSTDVTAYRALESSL 641
A + + ++ D Y +L + +
Sbjct: 325 AKKFLNVMMEEGHVPDAVTYTSLMNGM 351
>gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]
Length = 444
Score = 286 bits (733), Expect = 7e-75
Identities = 132/220 (60%), Positives = 168/220 (76%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLRE TRL+++L + GFKPDC+LYN IMKGYCM+ + E +EVYNKMK+ G++
Sbjct: 219 DNVCNSKNLREITRLVAVLGEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNKMKENGVE 278
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PD VT+NTL+FGL+K+G +A+K+L IMAE GH PDVVTYTSLMNGLCR
Sbjct: 279 PDTVTYNTLIFGLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYAL 338
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EM+E+GC PNECTYNTLL G CKAK + V+LY+VM +GM+L+ A+YAT +R CR
Sbjct: 339 LEEMKERGCEPNECTYNTLLHGFCKAKMVERGVELYRVMKERGMELDTAAYATLVRVFCR 398
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++AEAYEVFDYA++SKS T+V AY LES+LK +NK +
Sbjct: 399 RGEVAEAYEVFDYAVESKSLTNVAAYSTLESALKEVNKAR 438
Score = 95.9 bits (237), Expect = 2e-17
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQ 182
A+C + A +L +S PD Y YN ++K C + E +K + G++
Sbjct: 149 ALCYAGKIDHAVQLFDEMSLRHSVPDSYTYNFLVKCLCKCRPLSTIYEFIDKTRSSFGLK 208
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+ ++ + + L + + + ++ E G PD Y ++M G C
Sbjct: 209 PDLVTYTIIIDNVCNSKNLREITRLVAVLGEEGFKPDCFLYNTIMKGYCMLSRGSEAIEV 268
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E G P+ TYNTL+ GL K+ A + ++M KG + +Y + M LCR
Sbjct: 269 YNKMKENGVEPDTVTYNTLIFGLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNGLCR 328
Query: 543 ANKIAEAYEVFD 578
+ AY + +
Sbjct: 329 ERDVLGAYALLE 340
Score = 88.6 bits (218), Expect = 4e-15
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 1/200 (0%)
Frame = +3
Query: 45 LLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGLS 224
+L+L+S AGF PD ++ ++ C + ++++++M PD T+N LV L
Sbjct: 127 VLNLMSSAGFSPDKVTADIAVRALCYAGKIDHAVQLFDEMSLRHSVPDSYTYNFLVKCLC 186
Query: 225 KAGMLAQAKKFLN-IMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEKGCTPNE 401
K L+ +F++ + G PD+VTYT +++ +C + E+G P+
Sbjct: 187 KCRPLSTIYEFIDKTRSSFGLKPDLVTYTIIIDNVCNSKNLREITRLVAVLGEEGFKPDC 246
Query: 402 CTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFDY 581
YNT++ G C S A+++Y M G++ + +Y T + L ++ + EA +
Sbjct: 247 FLYNTIMKGYCMLSRGSEAIEVYNKMKENGVEPDTVTYNTLIFGLAKSGRAKEARKYLKI 306
Query: 582 AIQSKSSTDVTAYRALESSL 641
+ S DV Y +L + L
Sbjct: 307 MAEKGHSPDVVTYTSLMNGL 326
>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 464
Score = 286 bits (733), Expect = 7e-75
Identities = 131/220 (59%), Positives = 168/220 (76%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREA RL+ +L+++GFKPDC++YN IMKGYCM+ + E++EVY KMK+EG++
Sbjct: 239 DNVCNSKNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKEEGVE 298
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK+G + +A+K+L+IM E GHFPD VTYTSLMNG+CR
Sbjct: 299 PDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMCREGNALGAVLL 358
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL GLCK + + ++LY+ M + GM LE ASYAT +R LCR
Sbjct: 359 LEEMERKGCSPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMMLEKASYATLVRALCR 418
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++AEAYEVFDYA++SKS TDV AY LE +LK L K +
Sbjct: 419 EGRVAEAYEVFDYAVESKSLTDVAAYSTLEVTLKWLKKAR 458
Score = 85.1 bits (209), Expect = 4e-14
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Frame = +3
Query: 24 NLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFN 203
+L + L+L+ G KP+ +V ++ C + +E+ ++ + PD TFN
Sbjct: 140 SLSPVRQTLNLMVTNGLKPNQVTTDVAIRSLCEAGRIDHAVELVKELSLKHSPPDNFTFN 199
Query: 204 TLVFGLSKAGMLAQAKKFLNIM-AEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEE 380
LV L K L+ F++ M + G PD+VTYT L++ +C + E
Sbjct: 200 FLVKNLCKCRTLSTVYGFIDDMKSSFGIKPDLVTYTILIDNVCNSKNLREAMRLVGVLNE 259
Query: 381 KGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAE 560
G P+ YNT++ G C S +++Y+ M +G++ + +Y T + L ++ ++ E
Sbjct: 260 SGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKE 319
Query: 561 AYEVFDYAIQSKSSTDVTAYRALESSL 641
A + D ++S D Y +L + +
Sbjct: 320 ARKYLDIMVESGHFPDAVTYTSLMNGM 346
>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum tuberosum]
Length = 467
Score = 285 bits (730), Expect = 1e-74
Identities = 134/220 (60%), Positives = 163/220 (74%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREATRLL +LS+ G+KPDCY+YN IMKGYCM+ Q GEV+ VY KM++EG++
Sbjct: 242 DNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVK 301
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL++GLSK+G + AKKFLN+M E GH PD VTYTSLMNG+CR
Sbjct: 302 PDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVAL 361
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+ME +GC PN CTYNTLL GLCK + L ++LY VM KLE SY TF+R LCR
Sbjct: 362 LEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNSTKLETGSYGTFLRALCR 421
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++AEAY+VFDYAI+SKS TDV AY LES+LK L K +
Sbjct: 422 NGRVAEAYDVFDYAIESKSLTDVAAYTTLESTLKWLKKAR 461
Score = 92.8 bits (229), Expect = 2e-16
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Frame = +3
Query: 9 VCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQP 185
+C + +A L+ LS PD Y YN I++ C + +M++ I+P
Sbjct: 173 LCSSGHEEQAIELVKELSSKDSPPDTYTYNFIVRHLCKNRPLSTMNNFIKEMREGFDIKP 232
Query: 186 DLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXX 365
DLVT+ ++ + + L +A + L +++E G+ PD Y ++M G C
Sbjct: 233 DLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVY 292
Query: 366 XEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E+G P+ TYNTL+ GL K+ + +A + VM+ +G + +Y + M +CR
Sbjct: 293 KKMQEEGVKPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCR 351
Score = 74.3 bits (181), Expect = 7e-11
Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Frame = +3
Query: 24 NLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFN 203
+L ++L+L++ GF P+ ++ ++ C + +E+ ++ + PD T+N
Sbjct: 143 SLSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYN 202
Query: 204 TLVFGLSKAGMLAQAKKFLNIMAEMGHF-PDVVTYTSLMNGLCRXXXXXXXXXXXXEMEE 380
+V L K L+ F+ M E PD+VTYT +++ +C + E
Sbjct: 203 FIVRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSE 262
Query: 381 KGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAE 560
+G P+ YNT++ G C + +Y+ M +G+K + +Y T + L ++ ++ +
Sbjct: 263 EGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVKPDLVTYNTLIYGLSKSGRVKD 322
Query: 561 AYEVFDYAIQSKSSTDVTAYRALESSL 641
A + + ++ D Y +L + +
Sbjct: 323 AKKFLNVMMEEGHVPDAVTYTSLMNGM 349
>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 285 bits (729), Expect = 2e-74
Identities = 131/220 (59%), Positives = 168/220 (76%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREATRL+ +L + GFKPDC+LYN IMKGYCM+ + E +EVYN+MK++G++
Sbjct: 242 DNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVE 301
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDL+T+NTL+FGLSK+G +++AKK L +MAE GHFPD VTYTSLMNG+CR
Sbjct: 302 PDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALAL 361
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL GLCK++ A++LY M + G+KL+ ASYATF+R LC
Sbjct: 362 LEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCS 421
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++A+AYEVFDYA++SKS +DV AY LES+LK K K
Sbjct: 422 VGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWFKKAK 461
Score = 100 bits (248), Expect = 1e-18
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQ 182
++C + +A L+ LS PD Y YN ++K C V ++M+ + ++
Sbjct: 172 SLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVK 231
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
P+LVT+ L+ + L +A + ++I+ E G PD Y ++M G C
Sbjct: 232 PNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEV 291
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
M+EKG P+ TYNTL+ GL K+ +S A +L +VM KG + +Y + M +CR
Sbjct: 292 YNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCR 351
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRAL 629
+ A + + S + Y L
Sbjct: 352 KGETLAALALLEEMEMKGCSPNTCTYNTL 380
Score = 59.7 bits (143), Expect = 2e-06
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKP-DCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE--G 176
+V + NL+EA + + ++ P D +N +++ Y + + + M
Sbjct: 59 SVFKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPS 118
Query: 177 IQPDLVTFNTLVFGL-----SKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXX 341
PD T++ L+ SK L+ + LN+M G PD T + LC
Sbjct: 119 FSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADR 178
Query: 342 XXXXXXXXXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITK-GMKLENASYA 518
E+ K C+P+ +YN L+ LCK++ LS M TK +K +Y
Sbjct: 179 VDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYT 238
Query: 519 TFMRTLCRANKIAEAYEVFDYAIQSKSSTDVTAYRAL 629
+ +C + EA + D + D Y +
Sbjct: 239 ILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTI 275
>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 472
Score = 285 bits (728), Expect = 3e-74
Identities = 132/228 (57%), Positives = 170/228 (74%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREATRL+ +L + GFKPDC+LYN IMKGYCM+ + E +EVYN+MK++G++
Sbjct: 245 DNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVE 304
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDL+T+NTL+FGLSK+G +++AKK L +MAE GHFPD VTYTSLMNG+CR
Sbjct: 305 PDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALAL 364
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL GLCK++ A++LY M + G+KL+ ASYATF+R LC
Sbjct: 365 LEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCS 424
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTKV*LTGTHW 686
++A+AYEVFDYA++SKS +DV AY LES+LK K K +W
Sbjct: 425 VGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWSRKQKKKALNFNW 472
Score = 61.6 bits (148), Expect = 5e-07
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 31/239 (12%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKP-DCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE--G 176
+V + NL+EA + + ++ P D +N +++ Y + + + M
Sbjct: 75 SVFKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPS 134
Query: 177 IQPDLVTFNTLVFGL-----SKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXX 341
PD T++ L+ SK L+ + LN+M G PD T + LC
Sbjct: 135 FSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADR 194
Query: 342 XXXXXXXXXEMEEKGCTPNECTYNTLLMGLCKAKCLS----------------------- 452
E+ K C+P+ +YN L+ LCK++ LS
Sbjct: 195 VDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYPNLVTYTILIDNVCNTKNLR 254
Query: 453 NAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFDYAIQSKSSTDVTAYRAL 629
A +L ++ +G K + Y T M+ C ++ +EA EV++ + D+ Y L
Sbjct: 255 EATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTL 313
>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 282 bits (722), Expect = 1e-73
Identities = 135/220 (61%), Positives = 167/220 (75%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC NLREA RL+SLL GFKPDC++YN IMKGYCMV + E + VY KMK+ G++
Sbjct: 239 DNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLE 298
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PD+VTFNTL+FGLSK+G + +A+ FL+IMAEMGHFPD VTYTSLMNG+CR
Sbjct: 299 PDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSL 358
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC PN CTYNTLL GL K++ L ++LY +M + MKLE ASY+TF+R LCR
Sbjct: 359 LKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRALCR 418
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
+ +IAEAYEVFDYA++SKS TDV+AY +LES+LKSL +
Sbjct: 419 SGRIAEAYEVFDYAVESKSLTDVSAYLSLESTLKSLKNAR 458
Score = 62.4 bits (150), Expect = 3e-07
Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 6/213 (2%)
Frame = +3
Query: 9 VCRGKNLREATRLLSLLSDAGFKP-DCYLYNVIMKGYCMVDQCGEVMEVYNKMK--DEGI 179
V + +L +A +L S A P + ++N +++ Y + + + M
Sbjct: 60 VFKSASLADAKKLYSSFVSATKAPFNLRVHNSLLQSYASIATLNDSISFLRHMSKVQPSF 119
Query: 180 QPDLVTFNTLVF--GLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXX 353
PD TF+ L+ G LA ++ LN M G PD VT + LC
Sbjct: 120 SPDQSTFHILLSTSGNRPDSTLASVQQILNFMVTNGFNPDKVTADLAVRSLCSVGLVDEA 179
Query: 354 XXXXXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQ-LYQVMITKGMKLENASYATFMR 530
E+ +K P+ TYN L+ LCK++ LS + ++ + G K + +Y +
Sbjct: 180 VELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYTILID 239
Query: 531 TLCRANKIAEAYEVFDYAIQSKSSTDVTAYRAL 629
+C +N + EA + + D Y +
Sbjct: 240 NVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTI 272
>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 281 bits (720), Expect = 2e-73
Identities = 130/220 (59%), Positives = 164/220 (74%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREA RLL +L + GFKPDC++YN IMKGYCM+ + + ++V+ KMK+EGI+
Sbjct: 233 DNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGIE 292
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDL+T+NTL+FGLSK G +++AK++L IM E GHFPD VTYTSLMNGLCR
Sbjct: 293 PDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGALAL 352
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+ME KGC+PN CTYNTLL GLCK + L ++LY V+ GM L+ ASYATF+R LCR
Sbjct: 353 LEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRALCR 412
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
K+AEAYEVFDYA++SKS T+ AY LES+LK L K +
Sbjct: 413 EGKVAEAYEVFDYAVESKSLTNAAAYTTLESTLKWLKKAR 452
>ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 281 bits (718), Expect = 4e-73
Identities = 134/220 (60%), Positives = 166/220 (75%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC NLREA RL+SLL GFKPDC++YN IMKGYCMV + E + VY KMK+ G++
Sbjct: 239 DNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLE 298
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PD+VTFNTL+FGLSK+G + +A+ FL+IMAEMGHFPD VTYTSLMNG+CR
Sbjct: 299 PDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSL 358
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC PN CTYNTLL GL K++ L ++LY +M + MKLE ASY+TF+R LCR
Sbjct: 359 LKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRALCR 418
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
+ +IAEAYE FDYA++SKS TDV+AY +LES+LKSL +
Sbjct: 419 SGRIAEAYEAFDYAVESKSLTDVSAYLSLESTLKSLKNAR 458
Score = 62.4 bits (150), Expect = 3e-07
Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 6/213 (2%)
Frame = +3
Query: 9 VCRGKNLREATRLLSLLSDAGFKP-DCYLYNVIMKGYCMVDQCGEVMEVYNKMK--DEGI 179
V + +L +A +L S A P + ++N +++ Y + + + M
Sbjct: 60 VFKSASLADAKKLYSSFISATKAPFNLRVHNSLLQSYASIATLNDSISFLRHMSKVQPSF 119
Query: 180 QPDLVTFNTLVF--GLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXX 353
PD TF+ L+ G LA ++ LN M G PD VT + LC
Sbjct: 120 SPDQSTFHILLSTSGNRPDSTLASVQQILNFMVTNGFNPDKVTADLAVRSLCSVGLVDEA 179
Query: 354 XXXXXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQ-LYQVMITKGMKLENASYATFMR 530
E+ +K P+ TYN L+ LCK++ LS + ++ + G K + +Y +
Sbjct: 180 VELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYTILID 239
Query: 531 TLCRANKIAEAYEVFDYAIQSKSSTDVTAYRAL 629
+C +N + EA + + D Y +
Sbjct: 240 NVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTI 272
>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855886|gb|EEE93433.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 462
Score = 277 bits (708), Expect = 5e-72
Identities = 130/220 (59%), Positives = 164/220 (74%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KN+REA RL+++L + G KPD +LYN IMKGYC++++ E + +Y +MK+EG++
Sbjct: 237 DNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGVE 296
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK G +++AKK L IM E GHFPD VTYTSLMNG+CR
Sbjct: 297 PDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAAL 356
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME KGC+PN CTYNTLL G CK + L+ V+LY V+ GMKLE ASYATF+R LCR
Sbjct: 357 LEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYATFVRALCR 416
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++AEAYEVFDYA++SKS TDV AY LES+LK L K +
Sbjct: 417 EGRVAEAYEVFDYAVESKSLTDVAAYTTLESTLKWLKKAR 456
Score = 94.7 bits (234), Expect = 5e-17
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQ 182
++C + +A L+ S KPD + YN ++K C V ++MK I+
Sbjct: 167 SLCSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIK 226
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+ L+ + A + +A + + ++ E G PD Y ++M G C
Sbjct: 227 PDLVTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRI 286
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E+G P+ TYNTL+ GL K +S A +L ++M+ G + +Y + M +CR
Sbjct: 287 YKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCR 346
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRAL 629
+ A + + S + Y L
Sbjct: 347 EGDVLGAAALLEEMELKGCSPNSCTYNTL 375
Score = 87.0 bits (214), Expect = 1e-14
Identities = 50/207 (24%), Positives = 103/207 (49%), Gaps = 1/207 (0%)
Frame = +3
Query: 24 NLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFN 203
+L A ++L+L+ + GFKP+ + +V ++ C + + + + + + +PD T+N
Sbjct: 138 SLSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGRVDDAILLVKEFSSKHSKPDTFTYN 197
Query: 204 TLVFGLSKAGMLAQAKKFLNIM-AEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEE 380
LV L K+ + F++ M + PD+VTYT L++ +C ++E
Sbjct: 198 FLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDNVCNAKNIREADRLVAVLKE 257
Query: 381 KGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAE 560
G P+ YNT++ G C AV++Y+ M +G++ + +Y T + L + +++E
Sbjct: 258 CGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSE 317
Query: 561 AYEVFDYAIQSKSSTDVTAYRALESSL 641
A ++ ++S D Y +L + +
Sbjct: 318 AKKLLKIMVESGHFPDAVTYTSLMNGM 344
>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Cicer arietinum]
gi|502155526|ref|XP_004510106.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Cicer arietinum]
Length = 468
Score = 273 bits (699), Expect = 6e-71
Identities = 131/220 (59%), Positives = 161/220 (73%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLRE L+S+L + GFK DCY YN IMKGYC + + E +EVYNKMK+ G++
Sbjct: 239 DNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAGVE 298
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDL+T+NTL++GLSK+G + +AKK L +MAE GHFPD VTYTSLMNGLCR
Sbjct: 299 PDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSAIAL 358
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME GC+PN CTYNTLL GLCK++ A++LY M + +KLE ASYATF+R LCR
Sbjct: 359 LEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKLEMASYATFVRALCR 418
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
A +IA+AYEVFDYA++SKS TDV AY LES+LK K K
Sbjct: 419 AGRIADAYEVFDYAVESKSLTDVAAYSTLESTLKWFKKAK 458
Score = 96.7 bits (239), Expect = 1e-17
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQ 182
++C + EA L+ LS PD Y +N ++K C + +M+ + G++
Sbjct: 169 SLCSAGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVK 228
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVTF L+ + A L + ++++ E G D Y ++M G C+
Sbjct: 229 PDLVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEV 288
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E G P+ TYNTL+ GL K+ + A +L +VM KG + +Y + M LCR
Sbjct: 289 YNKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCR 348
Query: 543 ANKIAEAYEVFD 578
+I A + +
Sbjct: 349 KGEILSAIALLE 360
Score = 80.5 bits (197), Expect = 1e-12
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Frame = +3
Query: 27 LREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFNT 206
L + + L+L+ G PD ++ ++ C + E +E+ ++ + PD+ TFN
Sbjct: 141 LSQIHQTLNLMVSDGVSPDKVTVDLAVRSLCSAGRMDEAVELIKELSSKHCSPDIYTFNF 200
Query: 207 LVFGLSKAGMLAQAKKFL-NIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEK 383
LV L K L+ F+ + ++ G PD+VT+T L++ +C ++E+
Sbjct: 201 LVKHLCKCLTLSTLYSFIIEMRSKFGVKPDLVTFTILIDNVCNAKNLRETLSLMSVLDEE 260
Query: 384 GCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEA 563
G + YNT++ G CK + A+++Y M G++ + +Y T + L ++ ++ EA
Sbjct: 261 GFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAGVEPDLITYNTLIYGLSKSGRVMEA 320
Query: 564 YEVFDYAIQSKSSTDVTAYRALESSL 641
++ + D Y +L + L
Sbjct: 321 KKLLRVMAEKGHFPDEVTYTSLMNGL 346
>gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
Length = 464
Score = 272 bits (695), Expect = 2e-70
Identities = 130/220 (59%), Positives = 159/220 (72%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D V +NLREATRL+ +L+ G +PDCY+YN IMKG C ++ E +EV KMK+ G++
Sbjct: 239 DNVTNRENLREATRLVDVLAKEGIRPDCYIYNTIMKGCCTLNLGNEALEVLKKMKENGVE 298
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK G + +AKK+L +M EMGHFPD VTYTSLMNGLCR
Sbjct: 299 PDLVTYNTLIFGLSKCGRVVEAKKYLGVMVEMGHFPDAVTYTSLMNGLCRKGDVLGALGL 358
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EM+EKGC PN CTYNTLL GLCKAK L + LY VM GMKL+ ASYAT +R LCR
Sbjct: 359 LEEMQEKGCEPNVCTYNTLLHGLCKAKLLEKGLDLYGVMKECGMKLDTASYATLVRALCR 418
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++A+AYEVFDYA++SKS TDV AY LE +LK L K +
Sbjct: 419 EGRVADAYEVFDYAVESKSVTDVAAYTTLEGTLKWLKKAR 458
Score = 95.9 bits (237), Expect = 2e-17
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDE-GIQ 182
++C N+ A L+ +S PD Y YN ++K C V + + K G++
Sbjct: 169 SLCSSNNVGLAVELIKEMSLKNAAPDSYTYNFLVKCLCKSSAVSTVYDFIEEFKTSFGLK 228
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PD++T+ L+ ++ L +A + ++++A+ G PD Y ++M G C
Sbjct: 229 PDIITYTILIDNVTNRENLREATRLVDVLAKEGIRPDCYIYNTIMKGCCTLNLGNEALEV 288
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+M+E G P+ TYNTL+ GL K + A + VM+ G + +Y + M LCR
Sbjct: 289 LKKMKENGVEPDLVTYNTLIFGLSKCGRVVEAKKYLGVMVEMGHFPDAVTYTSLMNGLCR 348
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTKV*LTGTHWWMQRRPCDIR 716
+ A + + + +V Y L L L K K+ G + + C ++
Sbjct: 349 KGDVLGALGLLEEMQEKGCEPNVCTYNTL---LHGLCKAKLLEKGLDLYGVMKECGMK 403
Score = 73.9 bits (180), Expect = 9e-11
Identities = 44/208 (21%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Frame = +3
Query: 21 KNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTF 200
+ L+ ++L+ + GF P+ ++ ++ C + G +E+ +M + PD T+
Sbjct: 139 QTLKPVHQVLNFMLTNGFSPNKVTTDIAVRSLCSSNNVGLAVELIKEMSLKNAAPDSYTY 198
Query: 201 NTLVFGLSKAGMLAQAKKFL-NIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEME 377
N LV L K+ ++ F+ G PD++TYT L++ + +
Sbjct: 199 NFLVKCLCKSSAVSTVYDFIEEFKTSFGLKPDIITYTILIDNVTNRENLREATRLVDVLA 258
Query: 378 EKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIA 557
++G P+ YNT++ G C + A+++ + M G++ + +Y T + L + ++
Sbjct: 259 KEGIRPDCYIYNTIMKGCCTLNLGNEALEVLKKMKENGVEPDLVTYNTLIFGLSKCGRVV 318
Query: 558 EAYEVFDYAIQSKSSTDVTAYRALESSL 641
EA + ++ D Y +L + L
Sbjct: 319 EAKKYLGVMVEMGHFPDAVTYTSLMNGL 346
Score = 59.3 bits (142), Expect = 2e-06
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 6/216 (2%)
Frame = +3
Query: 24 NLREATRLL-SLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKM--KDEGIQPDLV 194
NL +A ++ S+++ D ++N +++ Y + + + ++N M PD
Sbjct: 65 NLSDAKKVFNSIVTTTKVPLDLRVHNALLQSYASISTLNDSISLFNHMIKTHPTFSPDRS 124
Query: 195 TFNTLVFGLSKAG--MLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXX 368
T++ L+ KA L + LN M G P+ VT + LC
Sbjct: 125 TYHVLLSQSCKAPDQTLKPVHQVLNFMLTNGFSPNKVTTDIAVRSLCSSNNVGLAVELIK 184
Query: 369 EMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITK-GMKLENASYATFMRTLCRA 545
EM K P+ TYN L+ LCK+ +S + T G+K + +Y + +
Sbjct: 185 EMSLKNAAPDSYTYNFLVKCLCKSSAVSTVYDFIEEFKTSFGLKPDIITYTILIDNVTNR 244
Query: 546 NKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLN 653
+ EA + D + D Y + +LN
Sbjct: 245 ENLREATRLVDVLAKEGIRPDCYIYNTIMKGCCTLN 280
>ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform 1 [Fragaria vesca subsp. vesca]
gi|470102614|ref|XP_004287746.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 450
Score = 271 bits (694), Expect = 2e-70
Identities = 129/220 (58%), Positives = 163/220 (74%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D V KNLREATRL+ L GFKPDCY+YN IMKGYCM+ + EV++V +M+ +G++
Sbjct: 230 DNVANSKNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQAKGVE 289
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL+FGLSK G + AKK+L IM EMGHFPD VTYTSLMNGLCR
Sbjct: 290 PDLVTYNTLIFGLSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNGLCRKGDALGAVAL 349
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EM+ +GC PNECTYNTLL GLCK + L ++LY +M GMKL+ ASY T +RTLCR
Sbjct: 350 LSEMQAQGCRPNECTYNTLLHGLCKGRLLEKGLELYGLMKKDGMKLDTASYGTLVRTLCR 409
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
A +IA+AYEVFDYA++SKS T+V+AY LE+++K + K +
Sbjct: 410 AGRIADAYEVFDYAVESKSLTNVSAYLTLEATVKQVKKAR 449
Score = 95.1 bits (235), Expect = 4e-17
Identities = 50/179 (27%), Positives = 89/179 (49%)
Frame = +3
Query: 6 AVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQP 185
++C ++ EA +++ ++ PD Y YN ++K C V ++MK G++P
Sbjct: 161 SLCLAGHVDEAVQVMKQMALKSTVPDAYTYNFLVKCLCKSRVLSTVRGFIDEMKSFGLKP 220
Query: 186 DLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXX 365
DLVTF ++ ++ + L +A + ++ + + G PD Y ++M G C
Sbjct: 221 DLVTFTIMIDNVANSKNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVL 280
Query: 366 XEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EM+ KG P+ TYNTL+ GL K + +A + +M+ G + +Y + M LCR
Sbjct: 281 KEMQAKGVEPDLVTYNTLIFGLSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNGLCR 339
Score = 87.0 bits (214), Expect = 1e-14
Identities = 49/207 (23%), Positives = 101/207 (48%)
Frame = +3
Query: 21 KNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTF 200
+ L+ ++L+ + + GF PD ++ ++ C+ E ++V +M + PD T+
Sbjct: 131 QTLQSVHQVLNFMVNNGFHPDKVTTDIAVRSLCLAGHVDEAVQVMKQMALKSTVPDAYTY 190
Query: 201 NTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEE 380
N LV L K+ +L+ + F++ M G PD+VT+T +++ + E+E+
Sbjct: 191 NFLVKCLCKSRVLSTVRGFIDEMKSFGLKPDLVTFTIMIDNVANSKNLREATRLVDELEK 250
Query: 381 KGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAE 560
+G P+ YNT++ G C + VQ+ + M KG++ + +Y T + L + ++ +
Sbjct: 251 EGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQAKGVEPDLVTYNTLIFGLSKCGRVMD 310
Query: 561 AYEVFDYAIQSKSSTDVTAYRALESSL 641
A + ++ D Y +L + L
Sbjct: 311 AKKYLWIMVEMGHFPDEVTYTSLMNGL 337
Score = 57.8 bits (138), Expect = 7e-06
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 5/216 (2%)
Frame = +3
Query: 24 NLREATRLLSLLSDAGFKP-DCYLYNVIMKGYCMVDQCGEVMEVYNKM--KDEGIQPDLV 194
NL +A R+ + ++ + P D +N +++ Y + + + +N M P+
Sbjct: 57 NLSDAKRVFNSIATSTRNPLDLRRHNALLQSYAAISTVNDSIAFFNHMIKTQPAFSPERS 116
Query: 195 TFNTLVFGLSKAG--MLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXX 368
T++ L+ L + LN M G PD VT + LC
Sbjct: 117 TYHILLAQSCTVPDQTLQSVHQVLNFMVNNGFHPDKVTTDIAVRSLCLAGHVDEAVQVMK 176
Query: 369 EMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRAN 548
+M K P+ TYN L+ LCK++ LS M + G+K + ++ + + +
Sbjct: 177 QMALKSTVPDAYTYNFLVKCLCKSRVLSTVRGFIDEMKSFGLKPDLVTFTIMIDNVANSK 236
Query: 549 KIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNK 656
+ EA + D + D Y + L+K
Sbjct: 237 NLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSK 272
>ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda]
gi|548861268|gb|ERN18652.1| hypothetical protein
AMTR_s00065p00182300 [Amborella trichopoda]
Length = 470
Score = 271 bits (692), Expect = 4e-70
Identities = 130/220 (59%), Positives = 160/220 (72%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
DAVCR KNLREATRLL +L +AG+KPDC+LYN IMKGYC++D+ E + VY KM++EG +
Sbjct: 250 DAVCRSKNLREATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEGCE 309
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PDLVT+NTL++GLS AG A K+L +M E GH PD VTYTSLMNG+CR
Sbjct: 310 PDLVTYNTLIYGLSNAGKEDIAMKYLRVMVEEGHLPDTVTYTSLMNGMCRKGNATGALEL 369
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME++GC PN CTY+TLL GL KA L +++Y VM MK+E A YA +R LCR
Sbjct: 370 LKEMEDRGCEPNSCTYSTLLQGLFKAGNLDKGLEVYGVMKEGSMKMEAACYAVILRALCR 429
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
++A+AYEVFDYA+ SKS TDV AY ALESSLK L K+K
Sbjct: 430 GERVADAYEVFDYAVASKSLTDVAAYSALESSLKWLKKSK 469
Score = 80.5 bits (197), Expect = 1e-12
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Frame = +3
Query: 12 CRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ--- 182
C ++ + L+L++ +GF PD ++I++ C E E++ + ++
Sbjct: 142 CSNADMAAVHQTLALMTASGFPPDNVSCDLIVRALCSSALEDEACELFKDIASSNLKSRS 201
Query: 183 ---PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXX 353
PD+ TFN LV L K ++ +F++ +G PD+VTYT L++ +CR
Sbjct: 202 SSPPDMFTFNFLVRHLCKTRAMSAVYQFIDEARALGLEPDLVTYTILIDAVCRSKNLREA 261
Query: 354 XXXXXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRT 533
+ E G P+ YNT++ G C + A+ +Y+ M +G + + +Y T +
Sbjct: 262 TRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEGCEPDLVTYNTLIYG 321
Query: 534 LCRANKIAEAYEVFDYAIQSKSSTDVTAYRALESSL 641
L A K A + ++ D Y +L + +
Sbjct: 322 LSNAGKEDIAMKYLRVMVEEGHLPDTVTYTSLMNGM 357
Score = 68.9 bits (167), Expect = 3e-09
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 6/206 (2%)
Frame = +3
Query: 66 AGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGLSKAGMLAQ 245
+GF PD +N+I+ C V + M G PD V+ + +V L + + +
Sbjct: 125 SGFAPDHATFNIILGLCCSNADMAAVHQTLALMTASGFPPDNVSCDLIVRALCSSALEDE 184
Query: 246 AKKFL------NIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEKGCTPNECT 407
A + N+ + PD+ T+ L+ LC+ E G P+ T
Sbjct: 185 ACELFKDIASSNLKSRSSSPPDMFTFNFLVRHLCKTRAMSAVYQFIDEARALGLEPDLVT 244
Query: 408 YNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFDYAI 587
Y L+ +C++K L A +L V+ G K + Y T M+ C ++ AEA V+
Sbjct: 245 YTILIDAVCRSKNLREATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMR 304
Query: 588 QSKSSTDVTAYRALESSLKSLNKTKV 665
+ D+ Y L L + K +
Sbjct: 305 EEGCEPDLVTYNTLIYGLSNAGKEDI 330
>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
gi|557110430|gb|ESQ50721.1| hypothetical protein
EUTSA_v10022683mg [Eutrema salsugineum]
Length = 462
Score = 270 bits (690), Expect = 7e-70
Identities = 126/220 (57%), Positives = 163/220 (74%)
Frame = +3
Query: 3 DAVCRGKNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQ 182
D VC KNLREA RL+S L DAGFKPDC+LYN IMKG+C + + E + VY KMK+EG++
Sbjct: 237 DNVCNSKNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEGVE 296
Query: 183 PDLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXX 362
PD +T+NTL+FGLSK+G + +A+K+L M E G+ PD VTYTSLMNG+CR
Sbjct: 297 PDRITYNTLIFGLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSL 356
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
EME +GC PN CTYNTLL GLCKA+ + ++LY +M + G+KLE+++YAT +R L R
Sbjct: 357 LEEMEARGCAPNACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKLESSAYATLVRGLVR 416
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSLKSLNKTK 662
+ K+AEAYEVFDYA+ SKS TDV+AY LE++LK L K K
Sbjct: 417 SGKVAEAYEVFDYAVDSKSLTDVSAYTTLEATLKWLKKAK 456
Score = 79.0 bits (193), Expect = 3e-12
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Frame = +3
Query: 12 CRG--KNLREATRLLSLLSDAGFKPDCYLYNVIMKGYCMVDQCGEVMEVYNKMKDEGIQP 185
CR +L +L+L+ + G P+ ++ ++ C + E M++ ++ P
Sbjct: 132 CRAPDSSLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLCESGRISEAMDLIKELSKNHSPP 191
Query: 186 DLVTFNTLVFGLSKAGMLAQAKKFLNIMAEMGHF-PDVVTYTSLMNGLCRXXXXXXXXXX 362
D T+N L+ L K G L +F++ M E PD+V+YT L++ +C
Sbjct: 192 DTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDLVSYTILIDNVCNSKNLREAMRL 251
Query: 363 XXEMEEKGCTPNECTYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCR 542
+ + G P+ YNT++ G C S A+ +Y+ M +G++ + +Y T + L +
Sbjct: 252 VSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEGVEPDRITYNTLIFGLSK 311
Query: 543 ANKIAEAYEVFDYAIQSKSSTDVTAYRALESSL 641
+ ++ EA + +++ D Y +L + +
Sbjct: 312 SGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGM 344
Score = 69.7 bits (169), Expect = 2e-09
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Frame = +3
Query: 54 LLSDAGFKPDCYLYNVIMKGYCMV--DQCGEVMEVYNKMKDEGIQPDLVTFNTLVFGLSK 227
L S GF P+ +++++ C V V N M + G+ P+ VT + V L +
Sbjct: 111 LKSQPGFSPEHSTFHILLSHACRAPDSSLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLCE 170
Query: 228 AGMLAQAKKFLNIMAEMGHFPDVVTYTSLMNGLCRXXXXXXXXXXXXEMEEK-GCTPNEC 404
+G +++A + +++ PD TY L+ LC+ EM+E P+
Sbjct: 171 SGRISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDLV 230
Query: 405 TYNTLLMGLCKAKCLSNAVQLYQVMITKGMKLENASYATFMRTLCRANKIAEAYEVFDYA 584
+Y L+ +C +K L A++L + G K + Y T M+ C +K +EA V+
Sbjct: 231 SYTILIDNVCNSKNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKM 290
Query: 585 IQSKSSTDVTAYRAL 629
+ D Y L
Sbjct: 291 KEEGVEPDRITYNTL 305