BLASTX nr result
ID: Zingiber23_contig00032517
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00032517
(501 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004136310.1| PREDICTED: pentatricopeptide repeat-containi... 152 6e-35
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera] 150 2e-34
gb|EOY29221.1| Pentatricopeptide (PPR) repeat-containing protein... 149 5e-34
emb|CBI20759.3| unnamed protein product [Vitis vinifera] 147 1e-33
ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi... 147 1e-33
gb|EXC32726.1| Pentatricopeptide repeat-containing protein [Moru... 147 1e-33
gb|EMJ27633.1| hypothetical protein PRUPE_ppa023621mg, partial [... 147 1e-33
ref|XP_003545545.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32
ref|XP_006382144.1| hypothetical protein POPTR_0006s28820g [Popu... 144 2e-32
ref|XP_002330760.1| predicted protein [Populus trichocarpa] 144 2e-32
ref|XP_006355183.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
ref|XP_004291235.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
ref|XP_004245300.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
gb|ESW33309.1| hypothetical protein PHAVU_001G059500g [Phaseolus... 141 8e-32
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,... 138 9e-31
ref|XP_006845608.1| hypothetical protein AMTR_s00019p00208640 [A... 137 1e-30
tpg|DAA40116.1| TPA: hypothetical protein ZEAMMB73_157272 [Zea m... 136 3e-30
ref|NP_001266340.1| hypothetical protein [Zea mays] gi|223945469... 136 3e-30
ref|XP_003588656.1| Pentatricopeptide repeat-containing protein ... 135 6e-30
ref|XP_003588655.1| Pentatricopeptide repeat-containing protein ... 135 6e-30
>ref|XP_004136310.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Cucumis sativus]
gi|449505519|ref|XP_004162495.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g10690-like [Cucumis sativus]
Length = 593
Score = 152 bits (383), Expect = 6e-35
Identities = 67/96 (69%), Positives = 86/96 (89%)
Frame = -2
Query: 290 SPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGDVGSARR 111
SPNL+RLTSR+V L+RR+QL Q+F+E+E+AKRRYG+LNTIVMNAV+EACVHCGD+ A R
Sbjct: 43 SPNLKRLTSRVVSLTRRKQLHQVFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALR 102
Query: 110 VFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
F+ M+ PD CG+D++S+G LLKGLGEARK+DEAF+
Sbjct: 103 TFNEMSKPDNCGLDNVSYGTLLKGLGEARKIDEAFQ 138
>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
Length = 1120
Score = 150 bits (379), Expect = 2e-34
Identities = 69/102 (67%), Positives = 87/102 (85%)
Frame = -2
Query: 308 PMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGD 129
P PNL+RLTSRIV+L+RRRQL QIF+E+E+AKRR+G+LNTIVMNAVMEACVHCGD
Sbjct: 43 PQNLSHKPNLKRLTSRIVQLTRRRQLDQIFEEIEIAKRRHGKLNTIVMNAVMEACVHCGD 102
Query: 128 VGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
V A +VFD M P+ CGVD++++G LLKGLGEAR++D+AF+
Sbjct: 103 VDLALKVFDEMTKPESCGVDNVTYGTLLKGLGEARRIDDAFQ 144
>gb|EOY29221.1| Pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein [Theobroma cacao]
Length = 600
Score = 149 bits (375), Expect = 5e-34
Identities = 69/108 (63%), Positives = 85/108 (78%)
Frame = -2
Query: 326 RRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEA 147
RR ++ P PNLRRLTSR+V+L+RRRQL QIF+E+E A+R YG+LNTIVMNAVMEA
Sbjct: 33 RRRLRRTFSPTKPPNLRRLTSRVVQLTRRRQLHQIFEEIESARREYGKLNTIVMNAVMEA 92
Query: 146 CVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
CVHCGDV A +F MA P GCGVD +++ LLKGLG AR++DEAF+
Sbjct: 93 CVHCGDVDMALNIFHQMAQPHGCGVDIVTYATLLKGLGRARRIDEAFQ 140
>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
Length = 570
Score = 147 bits (372), Expect = 1e-33
Identities = 68/102 (66%), Positives = 86/102 (84%)
Frame = -2
Query: 308 PMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGD 129
P PNL+RLTSRIV+L+RRRQL QIF+E+E+AKRR+G+LNTIVMNAVMEACVHCGD
Sbjct: 60 PQNLSHKPNLKRLTSRIVQLTRRRQLDQIFEEIEIAKRRHGKLNTIVMNAVMEACVHCGD 119
Query: 128 VGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
V A +VF M P+ CGVD++++G LLKGLGEAR++D+AF+
Sbjct: 120 VDLALKVFGEMTKPESCGVDNVTYGTLLKGLGEARRIDDAFQ 161
>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Vitis vinifera]
Length = 609
Score = 147 bits (372), Expect = 1e-33
Identities = 68/102 (66%), Positives = 86/102 (84%)
Frame = -2
Query: 308 PMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGD 129
P PNL+RLTSRIV+L+RRRQL QIF+E+E+AKRR+G+LNTIVMNAVMEACVHCGD
Sbjct: 43 PQNLSHKPNLKRLTSRIVQLTRRRQLDQIFEEIEIAKRRHGKLNTIVMNAVMEACVHCGD 102
Query: 128 VGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
V A +VF M P+ CGVD++++G LLKGLGEAR++D+AF+
Sbjct: 103 VDLALKVFGEMTKPESCGVDNVTYGTLLKGLGEARRIDDAFQ 144
>gb|EXC32726.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 584
Score = 147 bits (371), Expect = 1e-33
Identities = 72/108 (66%), Positives = 87/108 (80%)
Frame = -2
Query: 326 RRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEA 147
R S +SP KP NL+ LTSRIV L+RRRQL QI +EV +AKRRYG+LNTI MNAV+EA
Sbjct: 46 RFSTRSPRKP----NLKCLTSRIVHLTRRRQLHQIMEEVNVAKRRYGKLNTIAMNAVLEA 101
Query: 146 CVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
CVHCGD+ SA +VFD M PDGCGVD +++G LLKGLGEA ++DEAF+
Sbjct: 102 CVHCGDIESALKVFDEMYKPDGCGVDTVTYGTLLKGLGEAGRIDEAFQ 149
>gb|EMJ27633.1| hypothetical protein PRUPE_ppa023621mg, partial [Prunus persica]
Length = 574
Score = 147 bits (371), Expect = 1e-33
Identities = 67/99 (67%), Positives = 83/99 (83%)
Frame = -2
Query: 299 PHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGDVGS 120
P PNLRRLTSR+V+L+RRRQL QI +E+E+AK RYG+LNTIVMNAV+EACVHCGD+ S
Sbjct: 25 PPRKPNLRRLTSRVVQLTRRRQLHQIMEEIEMAKERYGKLNTIVMNAVVEACVHCGDIDS 84
Query: 119 ARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
A VFD M+ P CGVD +++G LLKGLG AR++DEAF+
Sbjct: 85 ALMVFDEMSDPGSCGVDTVTYGTLLKGLGRARRIDEAFQ 123
>ref|XP_003545545.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Glycine max]
Length = 590
Score = 144 bits (363), Expect = 1e-32
Identities = 69/109 (63%), Positives = 86/109 (78%)
Frame = -2
Query: 329 SRRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVME 150
+RR + P NLR LTSRIV+L+RR+QLRQI DEVE+AK+ +G+LN+IVMNAV+E
Sbjct: 31 TRRRLVKTAAPQEPKNLRHLTSRIVQLTRRKQLRQILDEVEVAKKHFGKLNSIVMNAVVE 90
Query: 149 ACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
ACV CGD+ SA R+FD M DGCGVD +++ LLKGLGEAR+VDEAFE
Sbjct: 91 ACVRCGDIDSAIRIFDEMKKRDGCGVDTVTYATLLKGLGEARRVDEAFE 139
>ref|XP_006382144.1| hypothetical protein POPTR_0006s28820g [Populus trichocarpa]
gi|550337299|gb|ERP59941.1| hypothetical protein
POPTR_0006s28820g [Populus trichocarpa]
Length = 566
Score = 144 bits (362), Expect = 2e-32
Identities = 71/100 (71%), Positives = 83/100 (83%)
Frame = -2
Query: 302 KPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGDVG 123
KPH S L+RLT RIV+L+RRRQL QIF+EVE AKRRYG+LNTIVMNAVMEACVHCGD
Sbjct: 28 KPHHS--LKRLTFRIVQLTRRRQLEQIFEEVESAKRRYGKLNTIVMNAVMEACVHCGDTE 85
Query: 122 SARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
SA +VFD M + CGVD +S+G LLKGLG AR++DEAF+
Sbjct: 86 SALKVFDEMCKSESCGVDGVSYGTLLKGLGVARRIDEAFQ 125
>ref|XP_002330760.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 144 bits (362), Expect = 2e-32
Identities = 71/100 (71%), Positives = 83/100 (83%)
Frame = -2
Query: 302 KPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGDVG 123
KPH S L+RLT RIV+L+RRRQL QIF+EVE AKRRYG+LNTIVMNAVMEACVHCGD
Sbjct: 39 KPHHS--LKRLTFRIVQLTRRRQLEQIFEEVESAKRRYGKLNTIVMNAVMEACVHCGDTE 96
Query: 122 SARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
SA +VFD M + CGVD +S+G LLKGLG AR++DEAF+
Sbjct: 97 SALKVFDEMCKSESCGVDGVSYGTLLKGLGVARRIDEAFQ 136
>ref|XP_006355183.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Solanum tuberosum]
Length = 637
Score = 142 bits (359), Expect = 4e-32
Identities = 64/95 (67%), Positives = 85/95 (89%)
Frame = -2
Query: 287 PNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGDVGSARRV 108
PNL+ LTSRIV+L+RRRQL QIF E+E+AK+R+G+LNTI+MNAVM+ACVHC D+ SA RV
Sbjct: 80 PNLKPLTSRIVDLTRRRQLHQIFVEIEIAKKRHGQLNTIIMNAVMQACVHCADIESALRV 139
Query: 107 FDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
FD M+ P+GCGVD+I++ LLKGLG+AR++D+AF+
Sbjct: 140 FDEMSGPEGCGVDNITYATLLKGLGDARRIDQAFQ 174
>ref|XP_004291235.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Fragaria vesca subsp. vesca]
Length = 582
Score = 142 bits (357), Expect = 6e-32
Identities = 67/110 (60%), Positives = 87/110 (79%)
Frame = -2
Query: 332 VSRRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVM 153
+ RR + + H NL+RLTSR+V+L+RRRQL QI +E+E+AK RYG+LNTIVMNAV+
Sbjct: 16 IRRRRITTASPRHS--NLKRLTSRVVQLTRRRQLHQIMEEIEIAKGRYGKLNTIVMNAVV 73
Query: 152 EACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
EACVHCGD+ SA +VFD M+ P CGVD +++ LLKGLG AR++DEAFE
Sbjct: 74 EACVHCGDIDSALKVFDEMSKPGSCGVDTVTYATLLKGLGVARRIDEAFE 123
>ref|XP_004245300.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Solanum lycopersicum]
Length = 632
Score = 142 bits (357), Expect = 6e-32
Identities = 64/95 (67%), Positives = 85/95 (89%)
Frame = -2
Query: 287 PNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHCGDVGSARRV 108
PNL+ LTSRIV+L+RRRQL QIF E+E+AK+R+G+LNTIVMNAVM+ACVHC D+ SA R+
Sbjct: 75 PNLKPLTSRIVDLTRRRQLHQIFVEIEIAKKRHGQLNTIVMNAVMQACVHCADIESALRL 134
Query: 107 FDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
FD M+ P+GCGVD+I++ LLKGLG+AR++D+AF+
Sbjct: 135 FDEMSGPEGCGVDNITYATLLKGLGDARRIDQAFQ 169
>gb|ESW33309.1| hypothetical protein PHAVU_001G059500g [Phaseolus vulgaris]
Length = 597
Score = 141 bits (356), Expect = 8e-32
Identities = 70/109 (64%), Positives = 88/109 (80%)
Frame = -2
Query: 329 SRRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVME 150
+RR + + P + NLR LTSRIV+L+RR+QLRQI DE+E+AKR++G+LNTIVMNAVME
Sbjct: 33 ARRRLVTTATPSDA-NLRHLTSRIVQLTRRKQLRQILDEIEVAKRQFGKLNTIVMNAVME 91
Query: 149 ACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
ACV CGD+ SA R+F M DGCGVD +++ LLKGLGEAR+VDEAFE
Sbjct: 92 ACVRCGDIDSAIRIFVEMKKGDGCGVDTVTYATLLKGLGEARRVDEAFE 140
>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 600
Score = 138 bits (347), Expect = 9e-31
Identities = 64/104 (61%), Positives = 88/104 (84%), Gaps = 3/104 (2%)
Frame = -2
Query: 305 MKPHP---SPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVMEACVHC 135
+K HP + NL++LTSR+V+L+RRRQL+QIF+E+E+AK R+G+LN IVMNAVMEACVHC
Sbjct: 34 LKIHPRSRNSNLKQLTSRVVQLTRRRQLQQIFEEIEVAKTRFGKLNKIVMNAVMEACVHC 93
Query: 134 GDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
G++ SA R+F+ M+ P GVD +++G LLKGLGEAR++DEAF+
Sbjct: 94 GNIDSALRLFEEMSKPGSSGVDGVTYGTLLKGLGEARRIDEAFQ 137
>ref|XP_006845608.1| hypothetical protein AMTR_s00019p00208640 [Amborella trichopoda]
gi|548848180|gb|ERN07283.1| hypothetical protein
AMTR_s00019p00208640 [Amborella trichopoda]
Length = 604
Score = 137 bits (345), Expect = 1e-30
Identities = 74/111 (66%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Frame = -2
Query: 332 VSRRSVKSPMKPHPSP-NLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAV 156
+SRR ++P PS NLR LT RIVEL+RRRQL Q+F+EV AKR+YG LNTI MNAV
Sbjct: 39 ISRR--RNPDFRDPSKFNLRNLTCRIVELTRRRQLHQVFEEVASAKRQYGELNTITMNAV 96
Query: 155 MEACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
MEACVHCGDV A RVF M+ P GCGVD I+F LLKGLGEAR+ DEAF+
Sbjct: 97 MEACVHCGDVDLAIRVFLEMSRPGGCGVDYITFTTLLKGLGEARRFDEAFQ 147
>tpg|DAA40116.1| TPA: hypothetical protein ZEAMMB73_157272 [Zea mays]
Length = 277
Score = 136 bits (343), Expect = 3e-30
Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 3/111 (2%)
Frame = -2
Query: 326 RRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRY---GRLNTIVMNAV 156
RRS P PS +LRRLT+RIV+L+RRRQL QI +EVE A+RR G LNTIVMNAV
Sbjct: 41 RRSRPRPRLVSPSTDLRRLTARIVDLTRRRQLAQIMEEVEAARRRVRGGGLLNTIVMNAV 100
Query: 155 MEACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
+EACV CGDV A R+F+ M P GCGVDD+S+G LLKGLG AR++DEAFE
Sbjct: 101 LEACVRCGDVDRALRLFEEMRGPMGCGVDDVSYGILLKGLGIARRIDEAFE 151
>ref|NP_001266340.1| hypothetical protein [Zea mays] gi|223945469|gb|ACN26818.1| unknown
[Zea mays] gi|414589544|tpg|DAA40115.1| TPA:
hypothetical protein ZEAMMB73_157272 [Zea mays]
Length = 620
Score = 136 bits (343), Expect = 3e-30
Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 3/111 (2%)
Frame = -2
Query: 326 RRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRY---GRLNTIVMNAV 156
RRS P PS +LRRLT+RIV+L+RRRQL QI +EVE A+RR G LNTIVMNAV
Sbjct: 41 RRSRPRPRLVSPSTDLRRLTARIVDLTRRRQLAQIMEEVEAARRRVRGGGLLNTIVMNAV 100
Query: 155 MEACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAFE 3
+EACV CGDV A R+F+ M P GCGVDD+S+G LLKGLG AR++DEAFE
Sbjct: 101 LEACVRCGDVDRALRLFEEMRGPMGCGVDDVSYGILLKGLGIARRIDEAFE 151
>ref|XP_003588656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477704|gb|AES58907.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 627
Score = 135 bits (340), Expect = 6e-30
Identities = 65/109 (59%), Positives = 84/109 (77%)
Frame = -2
Query: 332 VSRRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVM 153
+ RR +P K NL+ LTSRIV+LSRR+QLRQI +E+E+AK+R+G+LNTIV NAVM
Sbjct: 26 IRRRLFTTPRKT----NLKHLTSRIVQLSRRKQLRQILNEIEVAKKRFGKLNTIVKNAVM 81
Query: 152 EACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAF 6
EACV CGD+ SA +FD M +PD CGVD +++ LLKGLG+A + DEAF
Sbjct: 82 EACVRCGDIDSALNIFDEMKNPDACGVDTVTYATLLKGLGKAHRFDEAF 130
>ref|XP_003588655.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477703|gb|AES58906.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 639
Score = 135 bits (340), Expect = 6e-30
Identities = 65/109 (59%), Positives = 84/109 (77%)
Frame = -2
Query: 332 VSRRSVKSPMKPHPSPNLRRLTSRIVELSRRRQLRQIFDEVELAKRRYGRLNTIVMNAVM 153
+ RR +P K NL+ LTSRIV+LSRR+QLRQI +E+E+AK+R+G+LNTIV NAVM
Sbjct: 26 IRRRLFTTPRKT----NLKHLTSRIVQLSRRKQLRQILNEIEVAKKRFGKLNTIVKNAVM 81
Query: 152 EACVHCGDVGSARRVFDAMAHPDGCGVDDISFGNLLKGLGEARKVDEAF 6
EACV CGD+ SA +FD M +PD CGVD +++ LLKGLG+A + DEAF
Sbjct: 82 EACVRCGDIDSALNIFDEMKNPDACGVDTVTYATLLKGLGKAHRFDEAF 130