BLASTX nr result
ID: Zingiber23_contig00031998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00031998
(718 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I sub... 190 3e-46
ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I sub... 188 2e-45
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare] 186 8e-45
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory... 182 7e-44
ref|XP_004982002.1| PREDICTED: DNA-directed RNA polymerase I sub... 179 1e-42
ref|NP_001051059.2| Os03g0711700 [Oryza sativa Japonica Group] g... 167 2e-39
gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japo... 167 3e-39
ref|XP_002466584.1| hypothetical protein SORBIDRAFT_01g010360 [S... 140 5e-31
emb|CBI19898.3| unnamed protein product [Vitis vinifera] 139 7e-31
ref|XP_001765111.1| predicted protein [Physcomitrella patens] gi... 137 3e-30
tpg|DAA50974.1| TPA: hypothetical protein ZEAMMB73_892272 [Zea m... 137 5e-30
ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I sub... 129 9e-28
ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I sub... 128 2e-27
ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [A... 127 4e-27
ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I sub... 123 5e-26
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ... 121 3e-25
ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutr... 120 3e-25
gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma c... 120 6e-25
ref|XP_002875292.1| transcription factor S-II domain-containing ... 119 1e-24
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian... 119 1e-24
>ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Oryza
brachyantha]
Length = 125
Score = 190 bits (483), Expect = 3e-46
Identities = 85/124 (68%), Positives = 102/124 (82%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M+F ARDFLFCG+CGTLL F+SLH+A CPLCGFKR EI+GKETRY +T ED+RR+LK
Sbjct: 1 MAFWQARDFLFCGVCGTLLTFDSLHYASCPLCGFKRKTKEIQGKETRYAVTGEDIRRDLK 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
L+PFVVLE+ D AVKRA +N CP+C + +LEYYTKQLRSADEGQTVF+EC C+HK
Sbjct: 61 LDPFVVLESTLKDETAVKRATINRLCPECGYHELEYYTKQLRSADEGQTVFFECRDCRHK 120
Query: 503 FSIN 514
F+ N
Sbjct: 121 FNEN 124
>ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Brachypodium distachyon]
Length = 125
Score = 188 bits (477), Expect = 2e-45
Identities = 84/124 (67%), Positives = 100/124 (80%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M+F ARDFLFC +CGTLL F+S+ A CPLCGFKR IEGKETRY +T ED+RRELK
Sbjct: 1 MAFWQARDFLFCSVCGTLLDFDSVRSASCPLCGFKRKAKAIEGKETRYAVTDEDIRRELK 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
+EPFV LE+AP V+R VV+E CP+C HPQLEY+TKQLR+ADEGQTVFYECP+C+H
Sbjct: 61 IEPFVTLESAPKMDVIVQRVVVDETCPKCGHPQLEYHTKQLRAADEGQTVFYECPECRHN 120
Query: 503 FSIN 514
F +N
Sbjct: 121 FKVN 124
>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 125
Score = 186 bits (471), Expect = 8e-45
Identities = 83/125 (66%), Positives = 101/125 (80%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M+F ARDFLFCG+CGTLL F S +A CPLCGFKR +IEGKETRY +TAED+RRELK
Sbjct: 1 MAFWQARDFLFCGVCGTLLDFNSHRYASCPLCGFKRKAKDIEGKETRYAVTAEDIRRELK 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
++PFVVLE+AP V+R++ CP+C+H +LEYYTKQLRSADEGQT+FYECP+C H
Sbjct: 61 IKPFVVLESAPNLDIVVQRSLTERACPKCNHHELEYYTKQLRSADEGQTIFYECPECGHA 120
Query: 503 FSINT 517
F+ NT
Sbjct: 121 FNENT 125
>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
gi|108710721|gb|ABF98516.1| Transcription factor S-II
family protein, expressed [Oryza sativa Japonica Group]
Length = 126
Score = 182 bits (463), Expect = 7e-44
Identities = 82/125 (65%), Positives = 104/125 (83%), Gaps = 1/125 (0%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M+F ARDFLFCG+CGTLLKF+S+ A CPLCGFKR +IEGKETRYT+TAED+RRELK
Sbjct: 1 MAFWQARDFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKDIEGKETRYTVTAEDIRRELK 60
Query: 323 LEPFVVLENAPADAEA-VKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQH 499
L+P+V+LE + + V+RA VN+EC +C +P+L+YYTKQLRSADEGQTVFY+C C+H
Sbjct: 61 LDPYVILETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRH 120
Query: 500 KFSIN 514
+F+ N
Sbjct: 121 EFNEN 125
>ref|XP_004982002.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Setaria italica]
Length = 123
Score = 179 bits (453), Expect = 1e-42
Identities = 78/122 (63%), Positives = 95/122 (77%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M+F ARDFLFCG+CGTLL F+S+ A CPLCGFKR EIEGKETRYT+TAED+RRELK
Sbjct: 1 MAFWQARDFLFCGVCGTLLTFDSIRSASCPLCGFKRKAKEIEGKETRYTVTAEDIRRELK 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
+EPFV LE+AP V+R CP+C+HP EYY++Q+RSADEG+T FYEC +C H
Sbjct: 61 IEPFVTLESAPMQEVVVRRPKTRRPCPECNHPIAEYYSRQMRSADEGETTFYECMKCHHT 120
Query: 503 FS 508
F+
Sbjct: 121 FN 122
>ref|NP_001051059.2| Os03g0711700 [Oryza sativa Japonica Group]
gi|255674831|dbj|BAF12973.2| Os03g0711700 [Oryza sativa
Japonica Group]
Length = 154
Score = 167 bits (424), Expect = 2e-39
Identities = 82/153 (53%), Positives = 104/153 (67%), Gaps = 29/153 (18%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAE------- 301
M+F ARDFLFCG+CGTLLKF+S+ A CPLCGFKR +IEGKETRYT+TAE
Sbjct: 1 MAFWQARDFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKDIEGKETRYTVTAEVRPIALP 60
Query: 302 ---------------------DMRRELKLEPFVVLENAPADAEA-VKRAVVNEECPQCHH 415
D+RRELKL+P+V+LE + + V+RA VN+EC +C +
Sbjct: 61 SSSRETLGSSVSVATDFVSPQDIRRELKLDPYVILETTLKEEDVIVERATVNKECEKCKN 120
Query: 416 PQLEYYTKQLRSADEGQTVFYECPQCQHKFSIN 514
P+L+YYTKQLRSADEGQTVFY+C C+H+F+ N
Sbjct: 121 PELQYYTKQLRSADEGQTVFYKCANCRHEFNEN 153
>gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japonica Group]
gi|218193626|gb|EEC76053.1| hypothetical protein
OsI_13248 [Oryza sativa Indica Group]
Length = 156
Score = 167 bits (423), Expect = 3e-39
Identities = 82/155 (52%), Positives = 105/155 (67%), Gaps = 31/155 (20%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNV---------------------- 256
M+F ARDFLFCG+CGTLLKF+S+ A CPLCGFKR
Sbjct: 1 MAFWQARDFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKGRRLPHLSPCKALGCVLLAAD 60
Query: 257 --------SEIEGKETRYTITAEDMRRELKLEPFVVLENAPADAEA-VKRAVVNEECPQC 409
++IEGKETRYT+TAED+RRELKL+P+V+LE + + V+RA VN+EC +C
Sbjct: 61 AFVLFFYGADIEGKETRYTVTAEDIRRELKLDPYVILETTLKEEDVIVERATVNKECEKC 120
Query: 410 HHPQLEYYTKQLRSADEGQTVFYECPQCQHKFSIN 514
+P+L+YYTKQLRSADEGQTVFY+C C+H+F+ N
Sbjct: 121 KNPELQYYTKQLRSADEGQTVFYKCANCRHEFNEN 155
>ref|XP_002466584.1| hypothetical protein SORBIDRAFT_01g010360 [Sorghum bicolor]
gi|241920438|gb|EER93582.1| hypothetical protein
SORBIDRAFT_01g010360 [Sorghum bicolor]
Length = 115
Score = 140 bits (352), Expect = 5e-31
Identities = 64/121 (52%), Positives = 83/121 (68%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M+F ARDFLFCG+CGTLL F+S+H A CPLCGFKR E+EGK+ +YT+TAED+RR LK
Sbjct: 1 MAFWQARDFLFCGVCGTLLTFDSVHSASCPLCGFKRGAKEMEGKQIQYTMTAEDIRRGLK 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
+ V+R N+ C C HP+ EYY+ Q+RSADEG+T+FY C +C+
Sbjct: 61 ---------TLTEEIVVQRPKTNKTCKFCDHPEAEYYSLQMRSADEGETIFYTCTKCEKN 111
Query: 503 F 505
F
Sbjct: 112 F 112
>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
Length = 126
Score = 139 bits (351), Expect = 7e-31
Identities = 63/126 (50%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M++ RDF+FC +CGT+L S +A+CPLC +R V +I G+E RYT++AED+RREL
Sbjct: 1 MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELN 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQ-LEYYTKQLRSADEGQTVFYECPQCQH 499
+EPFV L+ + + A C +C L YYT+QLRSADEGQT+FYEC +C H
Sbjct: 61 IEPFVKLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGH 120
Query: 500 KFSINT 517
K+S NT
Sbjct: 121 KWSQNT 126
>ref|XP_001765111.1| predicted protein [Physcomitrella patens]
gi|162683698|gb|EDQ70106.1| predicted protein
[Physcomitrella patens]
Length = 130
Score = 137 bits (345), Expect = 3e-30
Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Frame = +2
Query: 161 RDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELKLEPFVV 340
+D LFC +CG+LL F+S FA C LC +R+V + +GKE Y T +D R L ++ +
Sbjct: 8 QDCLFCNLCGSLLSFDSASFASCLLCHNQRSVQDFQGKEIWYRSTPQDFMRRLGVDLLIQ 67
Query: 341 LENAPADA----EAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHKFS 508
E A E +RAVVN+ECP+C +P LEYYTKQLRSADEGQTVFYECP+C HKFS
Sbjct: 68 PEETQVKAKESDEMQQRAVVNDECPRCKNPSLEYYTKQLRSADEGQTVFYECPKCHHKFS 127
Query: 509 IN 514
N
Sbjct: 128 QN 129
>tpg|DAA50974.1| TPA: hypothetical protein ZEAMMB73_892272 [Zea mays]
Length = 115
Score = 137 bits (344), Expect = 5e-30
Identities = 65/121 (53%), Positives = 81/121 (66%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M+F RDFLFCG+CGTLL F+S+ A CPLCGFKR+ EIEGKE +YT+TAED+RR LK
Sbjct: 1 MAFWQTRDFLFCGICGTLLTFDSVRSASCPLCGFKRDAKEIEGKEIQYTMTAEDIRRGLK 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
+ V+ P V N+ CP+C HP+ E+Y Q+RSADEG+T FY C C
Sbjct: 61 TQTEDVVGQRP---------VTNKACPKCDHPKAEFYNIQMRSADEGETTFYMCKGCGCN 111
Query: 503 F 505
F
Sbjct: 112 F 112
>ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cicer
arietinum]
Length = 116
Score = 129 bits (324), Expect = 9e-28
Identities = 59/124 (47%), Positives = 82/124 (66%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
MS+ RDFLFC +CGT+L S +AQCPLC K+N+ I+GKE YTI+AED+RREL
Sbjct: 1 MSYSRGRDFLFCNLCGTMLAVPSTEYAQCPLCKTKQNIKHIKGKEISYTISAEDIRRELG 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
++ + + V+ + VN+ C +C H + +YT+Q+RSADEGQT FY C +C H+
Sbjct: 61 IDLI--------EEQKVQLSKVNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQ 112
Query: 503 FSIN 514
F N
Sbjct: 113 FQEN 116
>ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
X1 [Cicer arietinum] gi|502132990|ref|XP_004501609.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X2 [Cicer arietinum]
gi|502132992|ref|XP_004501610.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X3 [Cicer
arietinum]
Length = 116
Score = 128 bits (321), Expect = 2e-27
Identities = 58/124 (46%), Positives = 83/124 (66%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
MS+ RDFLFC +CGT+L S +AQCPLC ++N+ +I+GKE YTI+AED+RREL
Sbjct: 1 MSYSRGRDFLFCHLCGTMLAVPSTEYAQCPLCKTRKNIRDIKGKEISYTISAEDIRRELG 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
++ + + V+ + VN+ C +C H + +YT+Q+RSADEGQT FY C +C H+
Sbjct: 61 IDLI--------EEQKVQLSKVNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQ 112
Query: 503 FSIN 514
F N
Sbjct: 113 FQEN 116
>ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [Amborella trichopoda]
gi|548840003|gb|ERN00239.1| hypothetical protein
AMTR_s00111p00127690 [Amborella trichopoda]
Length = 102
Score = 127 bits (319), Expect = 4e-27
Identities = 59/90 (65%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Frame = +2
Query: 251 NVSEIEGKETRYTITAEDMRRELKLEPFVVLENAPADAE-AVKRAVVNEECPQCHHPQLE 427
+VSE+ G+E YTITAED+RR+L LEPFV L+ + + V+R VVNE CP+C +PQLE
Sbjct: 13 DVSELAGREICYTITAEDLRRDLNLEPFVQLDKDTREEDKGVQRTVVNEPCPKCLNPQLE 72
Query: 428 YYTKQLRSADEGQTVFYECPQCQHKFSINT 517
Y+TKQLRSADEGQTVFY+CP+C+HKFS+NT
Sbjct: 73 YHTKQLRSADEGQTVFYDCPKCRHKFSVNT 102
>ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Solanum lycopersicum] gi|565396690|ref|XP_006363942.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X1 [Solanum tuberosum]
gi|565396692|ref|XP_006363943.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X2 [Solanum
tuberosum]
Length = 121
Score = 123 bits (309), Expect = 5e-26
Identities = 57/125 (45%), Positives = 83/125 (66%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M++C RDF+FC MCGT+L F+S +A+CPLC FK+ V EI G E +YT++AE ++REL
Sbjct: 1 MAYCRQRDFMFCEMCGTMLAFDSPKYARCPLCKFKKRVKEIAGNEIQYTVSAEAIKRELG 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
+ F LE + + +K+ N +C C H + Y +Q+RSADEGQT+FY C C +K
Sbjct: 61 ISSFDDLE----EEKELKQMDYNAKCKGCQHLGMSYIARQIRSADEGQTIFYTCLVCGNK 116
Query: 503 FSINT 517
+ N+
Sbjct: 117 QTENS 121
>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
gi|357470681|ref|XP_003605625.1| DNA-directed RNA
polymerase I subunit RPA12 [Medicago truncatula]
gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
Length = 115
Score = 121 bits (303), Expect = 3e-25
Identities = 56/122 (45%), Positives = 79/122 (64%)
Frame = +2
Query: 149 FCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELKLE 328
+ RDFLFC +CGT+L S +A CPLC K N+ +I+GKE YTI+AED+RREL ++
Sbjct: 2 YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGID 61
Query: 329 PFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHKFS 508
+ + V+ + VN+ C +C H + +YT+Q+RSADEGQT FY C +C H+F
Sbjct: 62 LI--------EEQKVQLSKVNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQ 113
Query: 509 IN 514
N
Sbjct: 114 EN 115
>ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutrema salsugineum]
gi|557087097|gb|ESQ27949.1| hypothetical protein
EUTSA_v10019327mg [Eutrema salsugineum]
Length = 119
Score = 120 bits (302), Expect = 3e-25
Identities = 58/114 (50%), Positives = 74/114 (64%)
Frame = +2
Query: 167 FLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELKLEPFVVLE 346
FLFC +CGT+L +S A+CPLC RN EI GKE YT++AED+RREL + F E
Sbjct: 9 FLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKEIAYTVSAEDIRRELGISLFG--E 66
Query: 347 NAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHKFS 508
DAE K + + C +C HP+L Y T+Q RSADEGQT +Y CP C H+F+
Sbjct: 67 KTQEDAELPK---IKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCSHRFT 117
>gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma cacao]
Length = 119
Score = 120 bits (300), Expect = 6e-25
Identities = 59/124 (47%), Positives = 80/124 (64%)
Frame = +2
Query: 143 MSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELK 322
M++ ARDF+FC CG++L S +A+CPLC FK + I G+E YTITAED+RR+L
Sbjct: 1 MAYSQARDFMFCSFCGSMLSLVSPKYAECPLCKFKPSAKGILGREIGYTITAEDIRRDLG 60
Query: 323 LEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHK 502
+ V E A A++ + C +C HP+LEY T+Q+RSADEGQTVF CP C+ K
Sbjct: 61 ISH--VSEGMKTKESA---ALIKQTCKKCGHPELEYTTRQMRSADEGQTVFLVCPNCKFK 115
Query: 503 FSIN 514
+ N
Sbjct: 116 DTEN 119
>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
transcription factor S-II domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 119
Score = 119 bits (298), Expect = 1e-24
Identities = 55/114 (48%), Positives = 72/114 (63%)
Frame = +2
Query: 167 FLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMRRELKLEPFVVLE 346
FLFC CGT+L +S +A+CPLC RN EI K+ YT+TAED+RREL + F
Sbjct: 9 FLFCNWCGTMLVLKSTKYAECPLCKTTRNAKEIINKDIAYTVTAEDIRRELGISLFGEKT 68
Query: 347 NAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQCQHKFS 508
A+ +K+A C +C HP+L Y T+Q RSADEGQT +Y CP C H+F+
Sbjct: 69 QEEAELPKIKKA-----CEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFT 117
>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
gi|9279599|dbj|BAB01057.1| unnamed protein product
[Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
putative RNA polymerase I subunit [Arabidopsis thaliana]
gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
protein [Arabidopsis thaliana]
Length = 119
Score = 119 bits (297), Expect = 1e-24
Identities = 58/126 (46%), Positives = 78/126 (61%)
Frame = +2
Query: 131 EKKRMSFCHARDFLFCGMCGTLLKFESLHFAQCPLCGFKRNVSEIEGKETRYTITAEDMR 310
EK R S +FLFC +CGT+L +S +A+CP C RN +I KE YT++AED+R
Sbjct: 2 EKSRES-----EFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIR 56
Query: 311 RELKLEPFVVLENAPADAEAVKRAVVNEECPQCHHPQLEYYTKQLRSADEGQTVFYECPQ 490
REL + F A A+ +K+A C +C HP+L Y T+Q RSADEGQT +Y CP
Sbjct: 57 RELGISLFGEKTQAEAELPKIKKA-----CEKCQHPELVYTTRQTRSADEGQTTYYTCPN 111
Query: 491 CQHKFS 508
C H+F+
Sbjct: 112 CAHRFT 117