BLASTX nr result

ID: Zingiber23_contig00031836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00031836
         (547 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001143146.1| hypothetical protein [Zea mays] gi|195615030...    60   3e-07
ref|XP_004981114.1| PREDICTED: uncharacterized protein LOC101777...    60   4e-07

>ref|NP_001143146.1| hypothetical protein [Zea mays] gi|195615030|gb|ACG29345.1|
           hypothetical protein [Zea mays]
           gi|414873845|tpg|DAA52402.1| TPA: hypothetical protein
           ZEAMMB73_212253 [Zea mays]
          Length = 118

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
 Frame = -1

Query: 541 MEVDDSFKRPGSIPFKWEVQPGVPKQKNIIG----PDSPQKLCLPP 416
           M +D+SFKRPG++PFKWEVQPG+PKQ+   G    P +  +L LPP
Sbjct: 1   MTLDESFKRPGTVPFKWEVQPGIPKQQGAAGDVPPPPTSPRLALPP 46


>ref|XP_004981114.1| PREDICTED: uncharacterized protein LOC101777976 [Setaria italica]
          Length = 140

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 17/65 (26%)
 Frame = -1

Query: 541 MEVDDSFKRPGSIPFKWEVQPGVPKQKNI---------------IGPDSPQKLCLPPV-- 413
           M VD+SFKRPGSIPFKWEVQPG+PKQ+ +               + P +P KL LPP   
Sbjct: 1   MAVDESFKRPGSIPFKWEVQPGIPKQEELPPAAAGDSTAVPAPGLPPTTP-KLALPPAAR 59

Query: 412 LCAIS 398
           +CA++
Sbjct: 60  VCALA 64


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