BLASTX nr result

ID: Zingiber23_contig00031807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00031807
         (276 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004976981.1| PREDICTED: uncharacterized protein LOC101783...    62   1e-07
gb|EMT31428.1| hypothetical protein F775_05578 [Aegilops tauschii]     59   5e-07
dbj|BAJ90358.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   7e-07
gb|EMT01686.1| hypothetical protein F775_18370 [Aegilops tauschii]     57   2e-06
gb|EMT11342.1| hypothetical protein F775_18710 [Aegilops tauschii]     55   7e-06
ref|XP_003577836.1| PREDICTED: uncharacterized protein LOC100827...    55   1e-05
ref|NP_001132554.1| putative mitochondrial transcription termina...    55   1e-05

>ref|XP_004976981.1| PREDICTED: uncharacterized protein LOC101783847 [Setaria italica]
          Length = 390

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   GIPEERVCLLLRRHPCFIVQKPDSLRALVNRAEGIGIPRGSGMFCLILDVLHGVSNEKFE 181
           G+PE R+   +R  P  I+Q P  LRAL  R +  G+PRGS M+   L  LH VS+  F 
Sbjct: 199 GVPEARLAATVRLKPSLILQSPARLRALAARVDACGVPRGSRMYAWALLALHSVSDAAFR 258

Query: 182 A-HAKLMNSFDWLNSDFFAAIKKHPTFLLRS 271
           A    +M        +F A  ++ P FL  S
Sbjct: 259 AKRDAVMRGTGCTEQEFLAMFRRAPCFLFMS 289


>gb|EMT31428.1| hypothetical protein F775_05578 [Aegilops tauschii]
          Length = 222

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   GIPEERVCLLLRRHPCFIVQKPDSLRALVNRAEGIGIPRGSGMFCLILDVLHGVSNEKFE 181
           G+ +  +  L    P  +   P+ +RA+V  AEGIG+PRGSGMF   L  +  +S EK  
Sbjct: 28  GLGDCDIAKLCIHGPRMLATNPERVRAMVACAEGIGVPRGSGMFRQALQAVAFLSEEKIA 87

Query: 182 AHAK-LMNSFDWLNSDFFAAIKKHPTFLLRS 271
           A    L N+F W +++   A++K+P  L +S
Sbjct: 88  AKVDYLKNTFRWSDAEVSIALRKYPVVLRKS 118


>dbj|BAJ90358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 382

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   GIPEERVCLLLRRHPCFIVQKPDSLRALVNRAEGIGIPRGSGMFCLILDVLHGVSNEKFE 181
           G+ +  +  L    P  +V  P+ LRA+   AEGIG+PRGSGMF   L  +  +S EK  
Sbjct: 188 GLADRDIAKLSISQPWMLVASPERLRAMAACAEGIGVPRGSGMFRQALQAVAFLSAEKIA 247

Query: 182 AHAKLMNS-FDWLNSDFFAAIKKHPTFLLRS 271
           A    + S F W +S+   A+ + P  L+ S
Sbjct: 248 ARVDFLKSVFKWSDSEVGIAVSRAPRVLITS 278


>gb|EMT01686.1| hypothetical protein F775_18370 [Aegilops tauschii]
          Length = 380

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   GIPEERVCLLLRRHPCFIVQKPDSLRALVNRAEGIGIPRGSGMFCLILDVLHGVSNEKFE 181
           G+ +  +  L  R+P  +    +S+RA+V+ AE +G+PRGS MF   +  +  +S EK  
Sbjct: 186 GLGDCDIAKLCIRNPWLLTTNVESIRAMVSCAESLGVPRGSRMFRHAVSAVAYLSEEKIA 245

Query: 182 AHA-KLMNSFDWLNSDFFAAIKKHPTFLLRS 271
           A A  L  +F W +++   A+ KHP  L RS
Sbjct: 246 AKAGYLKKTFRWSDAEVSIAVSKHPILLTRS 276


>gb|EMT11342.1| hypothetical protein F775_18710 [Aegilops tauschii]
          Length = 441

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   GIPEERVCLLLRRHPCFIVQKPDSLRALVNRAEGIGIPRGSGMFCLILDVLHGVSNEKFE 181
           G+ +  +  L  R P  I+  P+ ++ +V  AE IG+PR SGMF   L+ +   S E+  
Sbjct: 272 GLRDCDIAKLCLRRPRIIITNPERVQEMVGCAESIGVPRYSGMFRHALNAVASFSKEEIA 331

Query: 182 AHAK-LMNSFDWLNSDFFAAIKKHPTFLLRS 271
           A  + L N+F W +++   A+ K P  L RS
Sbjct: 332 ARVEHLKNTFTWTDAEVSIAVSKAPLLLNRS 362


>ref|XP_003577836.1| PREDICTED: uncharacterized protein LOC100827317 [Brachypodium
           distachyon]
          Length = 386

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   GIPEERVCLLLRRHPCFIVQKPDSLRALVNRAEGIGIPRGSGMFCLILDVLHGVSNEKFE 181
           G+ +  +  L  R P  +   P   R +V  AEGIG+PR SGMF   L+ +  +S EK  
Sbjct: 192 GVVDSDIAKLCIRAPWILSINPQHFRDMVEWAEGIGVPRSSGMFLEALESVAFLSEEKIA 251

Query: 182 AHAK-LMNSFDWLNSDFFAAIKKHPTFLLRS 271
           A  + L  +F W +++   AI K P  L RS
Sbjct: 252 AQVEYLKKAFRWSDAEARIAISKAPILLRRS 282


>ref|NP_001132554.1| putative mitochondrial transcription termination factor family
           protein isoform 1 [Zea mays] gi|194694714|gb|ACF81441.1|
           unknown [Zea mays] gi|195638322|gb|ACG38629.1| mTERF
           family protein [Zea mays] gi|414590589|tpg|DAA41160.1|
           TPA: putative mitochondrial transcription termination
           factor family protein isoform 1 [Zea mays]
           gi|414590590|tpg|DAA41161.1| TPA: putative mitochondrial
           transcription termination factor family protein isoform
           2 [Zea mays]
          Length = 389

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = +2

Query: 44  PCFIVQKPDSLRALVNRAEGIGIPRGSGMFCLILDVLHGVSNEKFEAHAK-LMNSFDWLN 220
           P  I   P+ +RA+V RAE +G+PRG+GMF   L  +  +S EK +A A+ L  +F W +
Sbjct: 208 PRLITTNPERVRAMVERAEAVGVPRGTGMFRHALLAVAFLSEEKIKAKAEFLKTTFRWSD 267

Query: 221 SDFFAAIKKHPTFLLRS 271
           ++   A+ K P  L  S
Sbjct: 268 AEVGVAVSKLPLVLKHS 284


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