BLASTX nr result

ID: Zingiber23_contig00031678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00031678
         (400 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [S...    86   7e-15
ref|NP_199029.1| Regulator of chromosome condensation (RCC1) fam...    84   2e-14
gb|AFW75052.1| putative regulator of chromosome condensation (RC...    83   3e-14
gb|EMT32708.1| Putative E3 ubiquitin-protein ligase HERC2 [Aegil...    82   7e-14
gb|EMS61171.1| putative E3 ubiquitin-protein ligase HERC2 [Triti...    82   7e-14
gb|AAW78912.1| putative chromosome condensation factor [Triticum...    82   7e-14
dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   7e-14
gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indi...    82   7e-14
gb|AAW78916.1| putative chromosome condensation factor [Triticum...    82   7e-14
gb|AAK84081.1|AF326781_2 putative chromosome condensation factor...    82   7e-14
ref|XP_004960555.1| PREDICTED: uncharacterized protein LOC101786...    80   2e-13
ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832...    80   4e-13
ref|XP_002300931.1| chromosome condensation regulator family pro...    79   5e-13
gb|EXC19920.1| putative E3 ubiquitin-protein ligase HERC1 [Morus...    79   8e-13
ref|XP_006472955.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    78   1e-12
ref|XP_006434432.1| hypothetical protein CICLE_v10000092mg [Citr...    78   1e-12
ref|XP_006279937.1| hypothetical protein CARUB_v10025795mg [Caps...    78   1e-12
ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arab...    78   1e-12
ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group] g...    78   1e-12
gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japo...    78   1e-12

>ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
           gi|241945706|gb|EES18851.1| hypothetical protein
           SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/54 (72%), Positives = 47/54 (87%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQD+CD+LGDVYVWGE+ C+ S RTG+D  +  S+GRTD+LLPKPLESNLVLDV
Sbjct: 27  AQDECDSLGDVYVWGEVVCDTSVRTGSDT-VISSTGRTDILLPKPLESNLVLDV 79


>ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
           gi|9757959|dbj|BAB08447.1| TMV resistance protein-like
           [Arabidopsis thaliana] gi|332007389|gb|AED94772.1|
           Regulator of chromosome condensation (RCC1) family with
           FYVE zinc finger domain [Arabidopsis thaliana]
          Length = 1073

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 46/98 (46%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 SESFVRSERSDVV----NMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVWGE 116
           +E+ V SERS V     NMLV+G                    SA DDCD LGDVY+WGE
Sbjct: 177 TENSVSSERSHVASDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGE 236

Query: 115 ITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           + CE  T+ G D+ I     R+D+L+PKPLESN+VLDV
Sbjct: 237 VLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDV 274


>gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQD+CD+LGDVYVWGE+ C+ S RTG+D  +  S+GR D+LLPKPLESNLVLDV
Sbjct: 27  AQDECDSLGDVYVWGEVVCDTSVRTGSDT-VISSTGRIDILLPKPLESNLVLDV 79


>gb|EMT32708.1| Putative E3 ubiquitin-protein ligase HERC2 [Aegilops tauschii]
          Length = 948

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ C+ S RT +D  +  S+G+TD LLPKPLESNLVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVVCDNSARTSSDT-VVRSTGKTDFLLPKPLESNLVLDV 79


>gb|EMS61171.1| putative E3 ubiquitin-protein ligase HERC2 [Triticum urartu]
          Length = 1040

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ C+ S RT +D  +  S+G+TD LLPKPLESNLVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVVCDNSARTSSDT-VIRSTGKTDFLLPKPLESNLVLDV 79


>gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ C+ S RT +D  +  S+G+TD LLPKPLESNLVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVVCDNSARTSSDT-VIRSTGKTDFLLPKPLESNLVLDV 79


>dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ C+ S RT +D  +  S+G+TD LLPKPLESNLVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVVCDNSARTSSDT-VIRSTGKTDFLLPKPLESNLVLDV 79


>gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 46/91 (50%), Positives = 55/91 (60%)
 Frame = -1

Query: 274 FVRSERSDVVNMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVWGEITCEIST 95
           F+ + RS+V NM  +G                    SAQDDCD+LGDVYVWGE+ CE S 
Sbjct: 67  FLVTWRSNVTNMHTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSV 126

Query: 94  RTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           R G+D  I  S+ +TD LLPKPLES LVLDV
Sbjct: 127 RVGSDT-IIRSTEKTDFLLPKPLESRLVLDV 156


>gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ C+ S RT +D  +  S+G+TD LLPKPLESNLVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVVCDNSARTSSDT-VIRSTGKTDFLLPKPLESNLVLDV 79


>gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ C+ S RT +D  +  S+G+TD LLPKPLESNLVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVVCDNSARTSSDT-VIRSTGKTDFLLPKPLESNLVLDV 79


>ref|XP_004960555.1| PREDICTED: uncharacterized protein LOC101786547 [Setaria italica]
          Length = 916

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQD+CD+LGDVYVWGE+ C+ S RTG+D  +  S+GR D+LLPKPLES+LVLDV
Sbjct: 27  AQDECDSLGDVYVWGEVVCDNSVRTGSDT-VIRSTGRCDILLPKPLESSLVLDV 79


>ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           A DDCD+LGDVYVWGE+ C+ S RT +D  +  S+G+TD LLPKPLESNLVLDV
Sbjct: 27  APDDCDSLGDVYVWGEVVCDNSARTSSDT-VIRSTGKTDFLLPKPLESNLVLDV 79


>ref|XP_002300931.1| chromosome condensation regulator family protein [Populus
           trichocarpa] gi|222842657|gb|EEE80204.1| chromosome
           condensation regulator family protein [Populus
           trichocarpa]
          Length = 1114

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 46/99 (46%), Positives = 54/99 (54%)
 Frame = -1

Query: 298 SSAISSESFVRSERSDVVNMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVWG 119
           SS  S  S V SE +   NM VKG                    SA DDCD LGDVYVWG
Sbjct: 187 SSPHSDRSHVASENT---NMQVKGSGSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYVWG 243

Query: 118 EITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           EI C+ + + G D+     S R D+LLP+PLESN+VLDV
Sbjct: 244 EIICDNAVKVGADKNATYLSTRADVLLPRPLESNVVLDV 282


>gb|EXC19920.1| putative E3 ubiquitin-protein ligase HERC1 [Morus notabilis]
          Length = 1169

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 40/96 (41%), Positives = 52/96 (54%)
 Frame = -1

Query: 289 ISSESFVRSERSDVVNMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVWGEIT 110
           ISS S      SD  NM +KG                    SA DDC+ LGD+Y+WGE+ 
Sbjct: 233 ISSNSVRSHVASDQTNMQIKGSGSDAFRVSVSSAPSTSSHGSAPDDCEALGDIYIWGEVI 292

Query: 109 CEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           C+ + + G D+     S R D+LLP+PLESN+VLDV
Sbjct: 293 CDNAVKVGADKNTSFLSPRADVLLPRPLESNVVLDV 328


>ref|XP_006472955.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Citrus sinensis]
          Length = 1117

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/100 (42%), Positives = 52/100 (52%)
 Frame = -1

Query: 301 TSSAISSESFVRSERSDVVNMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVW 122
           T  +IS  S      SD  NM VKG                    SA DDCD LGDVY+W
Sbjct: 186 TEGSISVNSERSHVASDNTNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDCDALGDVYIW 245

Query: 121 GEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           GE+ C+   + G D+ +     R D+LLP+PLESN+VLDV
Sbjct: 246 GEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDV 285


>ref|XP_006434432.1| hypothetical protein CICLE_v10000092mg [Citrus clementina]
           gi|557536554|gb|ESR47672.1| hypothetical protein
           CICLE_v10000092mg [Citrus clementina]
          Length = 1117

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/100 (42%), Positives = 52/100 (52%)
 Frame = -1

Query: 301 TSSAISSESFVRSERSDVVNMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVW 122
           T  +IS  S      SD  NM VKG                    SA DDCD LGDVY+W
Sbjct: 186 TEGSISVNSERSHVASDNTNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDCDALGDVYIW 245

Query: 121 GEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           GE+ C+   + G D+ +     R D+LLP+PLESN+VLDV
Sbjct: 246 GEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDV 285


>ref|XP_006279937.1| hypothetical protein CARUB_v10025795mg [Capsella rubella]
           gi|482548641|gb|EOA12835.1| hypothetical protein
           CARUB_v10025795mg [Capsella rubella]
          Length = 1039

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 SESFVRSERSDVV----NMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVWGE 116
           +E+ V SERS V     NMLV+G                    SA DDCD LGDVY+WGE
Sbjct: 182 TENSVSSERSHVASDSPNMLVRGSGSDVFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGE 241

Query: 115 ITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           + C+   R   D+       R+D+L+PKPLESN+VLDV
Sbjct: 242 VLCDNFARVMADKNASCVGSRSDVLIPKPLESNVVLDV 279


>ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata] gi|297309652|gb|EFH40076.1| hypothetical protein
           ARALYDRAFT_917597 [Arabidopsis lyrata subsp. lyrata]
          Length = 1083

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 SESFVRSERSDVV----NMLVKGXXXXXXXXXXXXXXXXXXXXSAQDDCDTLGDVYVWGE 116
           +E+ V SERS V     NMLV+G                    SA DDCD LGDVY+WGE
Sbjct: 182 TENSVSSERSHVASDSPNMLVRGPGSDVFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGE 241

Query: 115 ITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           + C+   + G ++       R+D+L+PKPLESN+VLDV
Sbjct: 242 VLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDV 279


>ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
           gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa
           Japonica Group]
          Length = 685

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ CE S R G+D  I  S+ +TD LLPKPLES LVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVFCENSVRVGSDT-IIRSTEKTDFLLPKPLESRLVLDV 79


>gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 163 AQDDCDTLGDVYVWGEITCEISTRTGTDRGIYLSSGRTDLLLPKPLESNLVLDV 2
           AQDDCD+LGDVYVWGE+ CE S R G+D  I  S+ +TD LLPKPLES LVLDV
Sbjct: 27  AQDDCDSLGDVYVWGEVFCENSVRVGSDT-IIRSTEKTDFLLPKPLESRLVLDV 79


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