BLASTX nr result

ID: Zingiber23_contig00031654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00031654
         (579 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08097.1| DNA binding protein, putative isoform 1 [Theobrom...    69   1e-09
ref|XP_006481910.1| PREDICTED: uncharacterized protein LOC102617...    66   6e-09
ref|XP_006430321.1| hypothetical protein CICLE_v10012017mg [Citr...    63   5e-08

>gb|EOY08097.1| DNA binding protein, putative isoform 1 [Theobroma cacao]
          Length = 387

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 53/132 (40%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
 Frame = -3

Query: 577 PDGRVXXXXXXXXXXXASPIQVVVGSFXXXXXXXXXXXXXXXXXXXXXXXTA--GPLTAA 404
           PDGRV           ASPIQ+VVGSF                        A    +TAA
Sbjct: 257 PDGRVIGGGLAGILVAASPIQIVVGSFMPNGYKVHKRKHYREHAVASTVAAAPSAAVTAA 316

Query: 403 RPISQANPQVD-CETPTSTLPVQPQVGSMDNAT-----PNPTLH--AASWHGLQ-SSEHK 251
           RPISQA P+ D C TPTS  P +  +G  DN+T     PN T    AA W+G + +S H+
Sbjct: 317 RPISQAKPEGDNCMTPTSPFPGE-SLGEGDNSTIDKHVPNATSSHAAAGWNGSEPTSIHR 375

Query: 250 PSPDINICLHGE 215
           PSPDIN+ +  E
Sbjct: 376 PSPDINVSVPSE 387


>ref|XP_006481910.1| PREDICTED: uncharacterized protein LOC102617101 isoform X1 [Citrus
           sinensis]
          Length = 366

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
 Frame = -3

Query: 577 PDGRVXXXXXXXXXXXASPIQVVVGSFXXXXXXXXXXXXXXXXXXXXXXXTAGP--LTAA 404
           PDGRV           ASPIQ+VVGSF                          P  L AA
Sbjct: 237 PDGRVIGGGVAGLLMAASPIQIVVGSFMPNGFKVHKRKHHREQTMPFMSPGGAPETLAAA 296

Query: 403 RPISQANPQVDCE-TPTSTLPVQPQ--VGSMDNA--TPNPTL-HAASWHGLQ-SSEHKPS 245
           RPISQ NP+ +   TP + +P Q Q  VG+ +N+   PNPT   +A W+G + ++  +PS
Sbjct: 297 RPISQVNPEKETSLTPITPVPRQSQAEVGNAENSKQVPNPTTSQSAGWNGSETTTSQRPS 356

Query: 244 PDINICLHGE 215
           PDIN+ L  E
Sbjct: 357 PDINVSLPNE 366


>ref|XP_006430321.1| hypothetical protein CICLE_v10012017mg [Citrus clementina]
           gi|557532378|gb|ESR43561.1| hypothetical protein
           CICLE_v10012017mg [Citrus clementina]
          Length = 366

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 48/131 (36%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
 Frame = -3

Query: 577 PDGRVXXXXXXXXXXXASPIQVVVGSFXXXXXXXXXXXXXXXXXXXXXXXTAGP--LTAA 404
           PDGRV           ASPIQ+VVGSF                          P  L AA
Sbjct: 237 PDGRVIGGGVAGLLMAASPIQIVVGSFMPNGFKVHKRKHHREQTMPFMSPGGAPETLAAA 296

Query: 403 RPISQANPQVDCE-TPTSTLPVQPQVGSMDNA-----TPNPTL-HAASWHGLQ-SSEHKP 248
           RPISQ NP+ +   TP + +P Q Q   ++NA      PNPT   +A W+G + ++  +P
Sbjct: 297 RPISQVNPEKETSLTPITPVPRQSQ-AEVENAENSKQVPNPTTSQSAGWNGSETTTSQRP 355

Query: 247 SPDINICLHGE 215
           SPDIN+ L  E
Sbjct: 356 SPDINVSLPNE 366


Top