BLASTX nr result
ID: Zingiber23_contig00031580
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00031580
(266 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 105 8e-21
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 105 8e-21
dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgar... 98 1e-18
dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sa... 97 2e-18
ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [S... 97 2e-18
ref|XP_004954443.1| PREDICTED: RNA-binding protein Nova-2-like [... 97 3e-18
ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [... 96 5e-18
gb|EOY18879.1| Binding to TOMV RNA 1L (long form) isoform 7 [The... 95 9e-18
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The... 95 9e-18
gb|EOY18877.1| Binding to TOMV RNA 1L (long form) isoform 5 [The... 95 9e-18
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao] 95 9e-18
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The... 95 9e-18
gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus... 94 2e-17
gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| un... 94 2e-17
ref|XP_006589355.1| PREDICTED: RNA-binding protein Nova-2-like i... 93 4e-17
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i... 93 4e-17
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i... 93 4e-17
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [... 92 6e-17
ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays] gi|195... 92 9e-17
gb|ACG30605.1| hypothetical protein [Zea mays] 92 9e-17
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 105 bits (261), Expect = 8e-21
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEFQ 48
MESP+ SSP+ P+RS PPRSPT+ EK T+IR LVSN AAG +IGKGGSTI++FQ
Sbjct: 1 MESPESAYVSSPEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQ 60
Query: 47 SQSGARIQLSRNHE 6
SQSGARIQLSRNHE
Sbjct: 61 SQSGARIQLSRNHE 74
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 105 bits (261), Expect = 8e-21
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEFQ 48
MESP+ SSP+ P+RS PPRSPT+ EK T+IR LVSN AAG +IGKGGSTI++FQ
Sbjct: 49 MESPESAYVSSPEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQ 108
Query: 47 SQSGARIQLSRNHE 6
SQSGARIQLSRNHE
Sbjct: 109 SQSGARIQLSRNHE 122
>dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 360
Score = 97.8 bits (242), Expect = 1e-18
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 15/89 (16%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRS---------------HPPRSPTAGDEEKQTHIRILVSNTAA 93
ME+P SSPDTAP+R+ H P + D+EK TH+R LVSNTAA
Sbjct: 1 MEAPGSPYASSPDTAPKRAPRSSPPPPQDRPDADHDPAADHEDDKEKPTHLRFLVSNTAA 60
Query: 92 GCIIGKGGSTISEFQSQSGARIQLSRNHE 6
GCIIGKGGSTI++FQSQSGARIQLSR+HE
Sbjct: 61 GCIIGKGGSTINDFQSQSGARIQLSRSHE 89
>dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group] gi|48716520|dbj|BAD23125.1| KH domain-containing
protein NOVA-like [Oryza sativa Japonica Group]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 7/81 (8%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRR---SHPP----RSPTAGDEEKQTHIRILVSNTAAGCIIGKGG 69
ME+P SSP++AP+R S PP ++ + D+EK TH+R LVSNTAAGCIIGKGG
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSSPPPPQQQASSEDDKEKPTHLRFLVSNTAAGCIIGKGG 60
Query: 68 STISEFQSQSGARIQLSRNHE 6
STI+EFQSQSGARIQLSR+HE
Sbjct: 61 STINEFQSQSGARIQLSRSHE 81
>ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein
SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 97.1 bits (240), Expect = 2e-18
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 8/82 (9%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPT--------AGDEEKQTHIRILVSNTAAGCIIGKG 72
ME+P SSP++AP+R+ PRSP D+EK TH+R LVSNTAAGCIIGKG
Sbjct: 1 MEAPGSPYASSPESAPKRA--PRSPPQQQPPSEEGDDKEKPTHLRFLVSNTAAGCIIGKG 58
Query: 71 GSTISEFQSQSGARIQLSRNHE 6
GSTI++FQSQSGARIQLSR+HE
Sbjct: 59 GSTINDFQSQSGARIQLSRSHE 80
>ref|XP_004954443.1| PREDICTED: RNA-binding protein Nova-2-like [Setaria italica]
Length = 344
Score = 96.7 bits (239), Expect = 3e-18
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 9/83 (10%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPT---------AGDEEKQTHIRILVSNTAAGCIIGK 75
ME+P SSP++AP+R+ PRSP D+EK TH+R LVSNTAAGCIIGK
Sbjct: 1 MEAPGSPYASSPESAPKRA--PRSPPQQQQQPSEEGDDKEKPTHLRFLVSNTAAGCIIGK 58
Query: 74 GGSTISEFQSQSGARIQLSRNHE 6
GGSTI++FQSQSGARIQLSR+HE
Sbjct: 59 GGSTINDFQSQSGARIQLSRSHE 81
>ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/88 (60%), Positives = 62/88 (70%), Gaps = 14/88 (15%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPTA--------------GDEEKQTHIRILVSNTAAG 90
ME+P SSP+TAP+R+ PRSP D+EK TH+R LVSNTAAG
Sbjct: 1 MEAPGSPYASSPETAPKRA--PRSPPPPQERPETQPEAEPEDDKEKPTHLRFLVSNTAAG 58
Query: 89 CIIGKGGSTISEFQSQSGARIQLSRNHE 6
CIIGKGGSTI++FQSQSGARIQLSR+HE
Sbjct: 59 CIIGKGGSTINDFQSQSGARIQLSRSHE 86
>gb|EOY18879.1| Binding to TOMV RNA 1L (long form) isoform 7 [Theobroma cacao]
Length = 218
Score = 95.1 bits (235), Expect = 9e-18
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPP-RSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEF 51
MES + SSP+ A +RS PP +SPT+ EK T+IR LVSN AAG +IGKGGSTI+EF
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 50 QSQSGARIQLSRNHE 6
QS+SGARIQLSRNHE
Sbjct: 61 QSKSGARIQLSRNHE 75
>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
Length = 314
Score = 95.1 bits (235), Expect = 9e-18
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPP-RSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEF 51
MES + SSP+ A +RS PP +SPT+ EK T+IR LVSN AAG +IGKGGSTI+EF
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 50 QSQSGARIQLSRNHE 6
QS+SGARIQLSRNHE
Sbjct: 61 QSKSGARIQLSRNHE 75
>gb|EOY18877.1| Binding to TOMV RNA 1L (long form) isoform 5 [Theobroma cacao]
Length = 285
Score = 95.1 bits (235), Expect = 9e-18
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPP-RSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEF 51
MES + SSP+ A +RS PP +SPT+ EK T+IR LVSN AAG +IGKGGSTI+EF
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 50 QSQSGARIQLSRNHE 6
QS+SGARIQLSRNHE
Sbjct: 61 QSKSGARIQLSRNHE 75
>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
Length = 334
Score = 95.1 bits (235), Expect = 9e-18
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPP-RSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEF 51
MES + SSP+ A +RS PP +SPT+ EK T+IR LVSN AAG +IGKGGSTI+EF
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 50 QSQSGARIQLSRNHE 6
QS+SGARIQLSRNHE
Sbjct: 61 QSKSGARIQLSRNHE 75
>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
Length = 313
Score = 95.1 bits (235), Expect = 9e-18
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPP-RSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEF 51
MES + SSP+ A +RS PP +SPT+ EK T+IR LVSN AAG +IGKGGSTI+EF
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 50 QSQSGARIQLSRNHE 6
QS+SGARIQLSRNHE
Sbjct: 61 QSKSGARIQLSRNHE 75
>gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
Length = 335
Score = 94.0 bits (232), Expect = 2e-17
Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRR---SHPPRSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTIS 57
MES + SSP+ PR+ S PP+SP+ EEK T+IR LVSN+AAG +IGKGGSTI+
Sbjct: 1 MESTESSYVSSPE-GPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTIT 59
Query: 56 EFQSQSGARIQLSRNHE 6
EFQSQSGARIQLSRNHE
Sbjct: 60 EFQSQSGARIQLSRNHE 76
>gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087
protein [Zea mays]
Length = 344
Score = 94.0 bits (232), Expect = 2e-17
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 9/83 (10%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPT---------AGDEEKQTHIRILVSNTAAGCIIGK 75
ME+P SSP++AP+R+ PRSP D+EK TH+R LVSNTAAGCIIGK
Sbjct: 1 MEAPGSPYASSPESAPKRA--PRSPPQQQQSPSEEGDDKEKPTHLRFLVSNTAAGCIIGK 58
Query: 74 GGSTISEFQSQSGARIQLSRNHE 6
GGSTI++FQSQSGARIQLSR++E
Sbjct: 59 GGSTINDFQSQSGARIQLSRSNE 81
>ref|XP_006589355.1| PREDICTED: RNA-binding protein Nova-2-like isoform X3 [Glycine max]
Length = 305
Score = 92.8 bits (229), Expect = 4e-17
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRR---SHPPRSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTIS 57
MES + SSP+ PR+ S PP+SP+ EEK T+IR LVSN+AAG +IGKGGSTI+
Sbjct: 1 MESTESSYVSSPE-GPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTIT 59
Query: 56 EFQSQSGARIQLSRNHE 6
+FQSQSGARIQLSRNHE
Sbjct: 60 DFQSQSGARIQLSRNHE 76
>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
Length = 332
Score = 92.8 bits (229), Expect = 4e-17
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRR---SHPPRSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTIS 57
MES + SSP+ PR+ S PP+SP+ EEK T+IR LVSN+AAG +IGKGGSTI+
Sbjct: 1 MESTESSYVSSPE-GPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTIT 59
Query: 56 EFQSQSGARIQLSRNHE 6
+FQSQSGARIQLSRNHE
Sbjct: 60 DFQSQSGARIQLSRNHE 76
>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
Length = 337
Score = 92.8 bits (229), Expect = 4e-17
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRR---SHPPRSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTIS 57
MES + SSP+ PR+ S PP+SP+ EEK T+IR LVSN+AAG +IGKGGSTI+
Sbjct: 1 MESTESSYVSSPE-GPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTIT 59
Query: 56 EFQSQSGARIQLSRNHE 6
+FQSQSGARIQLSRNHE
Sbjct: 60 DFQSQSGARIQLSRNHE 76
>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 92.4 bits (228), Expect = 6e-17
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPP-RSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEF 51
MES + SSP+ +RS PP +SP + + EK T+IR LVSN AAG +IGKGGSTI++F
Sbjct: 1 MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 60
Query: 50 QSQSGARIQLSRNHE 6
QSQSGARIQLSRNHE
Sbjct: 61 QSQSGARIQLSRNHE 75
>ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays] gi|195659123|gb|ACG49029.1|
RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 91.7 bits (226), Expect = 9e-17
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 8/82 (9%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPT--------AGDEEKQTHIRILVSNTAAGCIIGKG 72
ME+P SSP++AP+R+ PRSP D+EK H+R LVSN +AGCIIGKG
Sbjct: 1 MEAPGSPYASSPESAPKRA--PRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKG 58
Query: 71 GSTISEFQSQSGARIQLSRNHE 6
GSTI++FQSQSGARIQLSR+HE
Sbjct: 59 GSTINDFQSQSGARIQLSRSHE 80
>gb|ACG30605.1| hypothetical protein [Zea mays]
Length = 104
Score = 91.7 bits (226), Expect = 9e-17
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 8/82 (9%)
Frame = -1
Query: 227 MESPKQHRDSSPDTAPRRSHPPRSPT--------AGDEEKQTHIRILVSNTAAGCIIGKG 72
ME+P SSP++AP+R+ PRSP D+EK H+R LVSN +AGCIIGKG
Sbjct: 1 MEAPGSPYASSPESAPKRA--PRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKG 58
Query: 71 GSTISEFQSQSGARIQLSRNHE 6
GSTI++FQSQSGARIQLSR+HE
Sbjct: 59 GSTINDFQSQSGARIQLSRSHE 80