BLASTX nr result

ID: Zingiber23_contig00031528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00031528
         (384 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296549.1| PREDICTED: beta-amylase 1, chloroplastic-lik...    66   6e-09
ref|XP_004166730.1| PREDICTED: beta-amylase 1, chloroplastic-lik...    60   3e-07
gb|AAY89374.1| beta-amylase 1 [Nicotiana langsdorffii x Nicotian...    60   4e-07
ref|XP_002314522.2| hypothetical protein POPTR_0010s07340g [Popu...    58   1e-06
ref|XP_004134029.1| PREDICTED: beta-amylase 1, chloroplastic-lik...    57   3e-06
ref|XP_004515248.1| PREDICTED: beta-amylase 1, chloroplastic-lik...    57   3e-06

>ref|XP_004296549.1| PREDICTED: beta-amylase 1, chloroplastic-like [Fragaria vesca
           subsp. vesca]
          Length = 578

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = +3

Query: 63  AAWKQQPAGEQNLRCRIQKSAEQEEIDVTLPMSPGRPPLLMGAQPDLSVADKEAVKLEEA 242
           +A ++ PA    L C+IQ    +E   +T PMSP R P+L   +PDLSVA +      EA
Sbjct: 36  SAVRKSPAA--GLTCKIQNPEGKETGMLTPPMSPCRSPVLGATRPDLSVACQAYATEVEA 93

Query: 243 AVVMEH-LXXXXXXXXXXXXXXMMPLDTVKPGGRLNRRKAINASLMAL 383
           A V+EH L              MMPLD+V     +NR+KA+NASL AL
Sbjct: 94  APVLEHELRGHVEKINGVPVFVMMPLDSVTMNHTVNRKKAMNASLQAL 141


>ref|XP_004166730.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 577

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   TPVVVDTGSVARVDQQSGPMAAWKQQPAGEQNLRCRIQKSAEQEEIDVTLPMSPGRPPLL 182
           TPV  +  +++  +       A  ++ +    LRCR+Q++   + +    P+SP R P+L
Sbjct: 15  TPVTSEASNISAGEASLAVNTAMLRKSSASP-LRCRVQRTDGVDALSP--PLSPCRSPVL 71

Query: 183 MGAQPDLSVADKE-AVKLEEAAVVMEHLXXXXXXXXXXXXXX-MMPLDTVKPGGRLNRRK 356
            G +PDLSVA +  A ++E    V E+                MMPLD+V  G  +NRRK
Sbjct: 72  GGIRPDLSVACQAFATEVEAPTEVREYKEEGEKGKEKGVPVYVMMPLDSVTMGNTVNRRK 131

Query: 357 AINASLMAL 383
           A+NASL AL
Sbjct: 132 AMNASLQAL 140


>gb|AAY89374.1| beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae]
          Length = 576

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
 Frame = +3

Query: 3   TPVVVDTGSVARVDQQSGPMAAWKQQPAGEQNLRCRIQKSAEQEEIDVTLPM-SPGRPPL 179
           TP+  +TG        +   AAW+       NLR  +QK+    ++D+  P  SP   PL
Sbjct: 15  TPLTAETGGEVPAKGNTTASAAWRTPLT---NLRVSVQKTGA--DVDMLSPTPSPPLSPL 69

Query: 180 LMGAQPDLSVADKEAVKLE-EAAVVMEH-LXXXXXXXXXXXXXXMMPLDTVKPGGRLNRR 353
             G +PDLSVA +  ++   E A   EH L              MMPLD+VK    +NR+
Sbjct: 70  KGGMRPDLSVACQALMEAPAETAAEREHRLGNSPEKGKGVPVFVMMPLDSVKMDHTVNRK 129

Query: 354 KAINASLMAL 383
           KA+NASL AL
Sbjct: 130 KAMNASLQAL 139


>ref|XP_002314522.2| hypothetical protein POPTR_0010s07340g [Populus trichocarpa]
           gi|550329291|gb|EEF00693.2| hypothetical protein
           POPTR_0010s07340g [Populus trichocarpa]
          Length = 586

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
 Frame = +3

Query: 3   TPVVVDTGSVARVDQQSGPMAAWKQQPAGEQNLRCRIQKSAEQEEIDVTLPMSPGRPPLL 182
           TP+  ++ + A     S   AAWK       ++RC+I K    E+   + P SP R P+L
Sbjct: 15  TPIQAESITSASTGSDSSAAAAWKTPIP---SIRCKIIKPETIEQ--KSQPTSPCRSPIL 69

Query: 183 MGA---QPDLSVADK-------EAVKLEEAAVVME---HLXXXXXXXXXXXXXXMMPLDT 323
            G+   +PDLSVA +       E + L+E+    E   +               MMPLD+
Sbjct: 70  SGSNGIRPDLSVACRAFATETLEFMTLDESKAAEEEKMYKEGKTEKEKGVPVYVMMPLDS 129

Query: 324 VKPGGRLNRRKAINASLMAL 383
           V  G  LNR+KA+NASL AL
Sbjct: 130 VTMGNTLNRKKAMNASLQAL 149


>ref|XP_004134029.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 577

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   TPVVVDTGSVARVDQQSGPMAAWKQQPAGEQNLRCRIQKSAEQEEIDVTLPMSPGRPPLL 182
           TPV  +  +++  +       A  ++ +    LRCR+Q++   + +    P+SP R P+L
Sbjct: 15  TPVTSEASNISAGEASLAVNTAMLRKSSASP-LRCRVQRTDGVDALSP--PLSPCRSPVL 71

Query: 183 MGAQPDLSVADKE-AVKLEEAAVVMEHLXXXXXXXXXXXXXX-MMPLDTVKPGGRLNRRK 356
            G +PDLSVA +  A ++E    V E+                MMPLD+V     +NRRK
Sbjct: 72  GGIRPDLSVACQAFATEVEAPTEVREYKEEGEKGKEKGVPVYVMMPLDSVTMENTVNRRK 131

Query: 357 AINASLMAL 383
           A+NASL AL
Sbjct: 132 AMNASLQAL 140


>ref|XP_004515248.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cicer arietinum]
          Length = 573

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   TPVVVDTGSVARVDQQSGPMAAWKQQPAGEQNLRCRIQKSAEQEEIDVTLPMSPGRPPLL 182
           TPV  +T S A         A WK  PA   NLR +  +S    E  +T P+SP R P+L
Sbjct: 15  TPVPSETTS-AETTSTVNAAAVWKS-PA--MNLRVKASRSDVIAE-GLTPPVSPCRSPVL 69

Query: 183 MGAQPDLSVADKEAVKLEEAAVVMEH-LXXXXXXXXXXXXXXMMPLDTVKPGGRLNRRKA 359
            G +PDL+ A +      E AV  EH                MMPLD+V     +NR+KA
Sbjct: 70  GGIRPDLTAACQAFTIESETAVEKEHKAGSRSVKGNGVPVYVMMPLDSVTMTNSVNRKKA 129

Query: 360 INASLMAL 383
           +NA++ AL
Sbjct: 130 VNAAMAAL 137


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