BLASTX nr result

ID: Zingiber23_contig00030868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00030868
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275012.1| PREDICTED: diaminopimelate decarboxylase 2, ...    75   9e-12
ref|XP_002283716.1| PREDICTED: diaminopimelate decarboxylase 2, ...    75   9e-12
ref|XP_002283712.1| PREDICTED: diaminopimelate decarboxylase 2, ...    75   9e-12
gb|EMJ01006.1| hypothetical protein PRUPE_ppa004857mg [Prunus pe...    71   2e-10
ref|XP_004289634.1| PREDICTED: diaminopimelate decarboxylase 2, ...    70   3e-10
ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, ...    69   7e-10
ref|XP_006365126.1| PREDICTED: diaminopimelate decarboxylase 1, ...    69   8e-10
gb|EXC04415.1| Diaminopimelate decarboxylase 2 [Morus notabilis]       67   2e-09
ref|XP_004230896.1| PREDICTED: diaminopimelate decarboxylase 1, ...    67   3e-09
ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ric...    67   3e-09
gb|EOX97955.1| Pyridoxal-dependent decarboxylase family protein ...    66   4e-09
gb|EOX97954.1| Pyridoxal-dependent decarboxylase family protein ...    66   4e-09
gb|EOX97953.1| Pyridoxal-dependent decarboxylase family protein ...    66   4e-09
gb|EPS59935.1| diaminopimelate decarboxylase, partial [Genlisea ...    66   6e-09
ref|XP_002313033.1| diaminopimelate decarboxylase family protein...    65   7e-09
ref|NP_001241015.1| uncharacterized protein LOC100786832 [Glycin...    65   1e-08
ref|XP_006423350.1| hypothetical protein CICLE_v100282841mg, par...    63   4e-08
ref|NP_001241982.1| uncharacterized protein LOC100809499 [Glycin...    63   4e-08
gb|ESW34744.1| hypothetical protein PHAVU_001G177300g [Phaseolus...    63   5e-08
ref|XP_002306119.1| diaminopimelate decarboxylase family protein...    63   5e-08

>ref|XP_002275012.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
           [Vitis vinifera]
          Length = 564

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
 Frame = +2

Query: 2   AAQLFSRASISPQIPHKPTAAALSLYP--SLRFPAFPRL------KTLALRAVSSQAPRA 157
           AA   S  + +  +P  PT +    YP     F  FP L      KTL L+AV SQ P  
Sbjct: 73  AAASSSSMAATNLLPQTPTFSKSLKYPLNPKSFSPFPNLLLRSSPKTLTLKAVLSQNPAK 132

Query: 158 -----AEATEFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
                A+A +F+HCF K EDGFLYC+G+RVQDVM  VE+ PF
Sbjct: 133 TLTPDAQAKKFQHCFRKSEDGFLYCEGLRVQDVMNQVEKRPF 174


>ref|XP_002283716.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic isoform 2
           [Vitis vinifera]
          Length = 423

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
 Frame = +2

Query: 41  IPHKPTAAALSLYP--SLRFPAFPRL------KTLALRAVSSQAPRA-----AEATEFRH 181
           +P  PT +    YP     F  FP L      KTL L+AV SQ P       A+A +F+H
Sbjct: 7   LPQAPTFSKSLKYPLNPKSFSPFPNLLLRPSPKTLTLKAVLSQNPAKTLTPDAQAQKFQH 66

Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           CF K EDGFLYC+G+RVQDVM+ VE+ PF
Sbjct: 67  CFRKSEDGFLYCEGLRVQDVMDQVEKRPF 95


>ref|XP_002283712.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic isoform 1
           [Vitis vinifera]
          Length = 485

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
 Frame = +2

Query: 41  IPHKPTAAALSLYP--SLRFPAFPRL------KTLALRAVSSQAPRA-----AEATEFRH 181
           +P  PT +    YP     F  FP L      KTL L+AV SQ P       A+A +F+H
Sbjct: 7   LPQAPTFSKSLKYPLNPKSFSPFPNLLLRPSPKTLTLKAVLSQNPAKTLTPDAQAQKFQH 66

Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           CF K EDGFLYC+G+RVQDVM+ VE+ PF
Sbjct: 67  CFRKSEDGFLYCEGLRVQDVMDQVEKRPF 95


>gb|EMJ01006.1| hypothetical protein PRUPE_ppa004857mg [Prunus persica]
          Length = 488

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
 Frame = +2

Query: 17  SRASISPQIPHKPTAAALSLYPSLRFPAFPR-LKTLALRAVSSQAPRAA-----EATEFR 178
           S +S S  + H  T    S  P L  P  P  LK L LRAV SQ P  +     + T F+
Sbjct: 11  SSSSFSKPLRHSLTRNPFSQNPIL--PLRPASLKPLVLRAVVSQNPSKSLTQDPQTTPFK 68

Query: 179 HCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           HCFSK  DGFLYC+G++VQ+V++ VER PF
Sbjct: 69  HCFSKSSDGFLYCEGLKVQEVIDSVERRPF 98


>ref|XP_004289634.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 479

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
 Frame = +2

Query: 50  KPTAAALSLYPSLR---FPAFPRLKTLALRAVSSQAPRAAEATEFRHCFSKGEDGFLYCD 220
           KP   +L   P  R    P  P LK L L+AV +Q   A +   F+HCFSK  DGFLYC+
Sbjct: 16  KPLNHSLPRNPFSRNSILPFKPSLKPLLLKAVLTQ--EAPQTVPFKHCFSKSSDGFLYCE 73

Query: 221 GVRVQDVMEGVERSPF 268
           G++VQDVME VE+ PF
Sbjct: 74  GLKVQDVMESVEKRPF 89


>ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
           [Cucumis sativus] gi|449524272|ref|XP_004169147.1|
           PREDICTED: diaminopimelate decarboxylase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 482

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = +2

Query: 95  PAFPRLKT-LALRAVSSQAPRAAEATEFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           P  P LK  L+L+AV SQ P   + T+F+HCFSK  DGFLYC+G++VQD+ME V++ PF
Sbjct: 35  PHKPFLKAPLSLKAVLSQNPSKTQ-TQFQHCFSKSSDGFLYCEGIKVQDIMESVDKRPF 92


>ref|XP_006365126.1| PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like
           [Solanum tuberosum]
          Length = 480

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   AAQLFSRASISPQIPHKPTAAALSLYP-SLRFPAFPRLKTLALRA-VSSQAPRAAEATEF 175
           A  L S +S   +    P+ A+  LY     FP  P  + L++RA VS+  P   +  +F
Sbjct: 3   ATHLVSHSSSLHKSLKYPSNASQKLYFFKPNFPLKPISRNLSIRASVSTSEP---QTQKF 59

Query: 176 RHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           +HCF K EDGFLYC+GV+V+DVME VER PF
Sbjct: 60  QHCFKKSEDGFLYCEGVKVEDVMETVERRPF 90


>gb|EXC04415.1| Diaminopimelate decarboxylase 2 [Morus notabilis]
          Length = 530

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = +2

Query: 68  LSLYPSLRFPAFPRLKTLALRAVSSQAP-RAAEATEFRHCFSKGEDGFLYCDGVRVQDVM 244
           LSL PSL+           LRAV SQ P + ++ T F+HCF+K  DGFL+C+G++VQDV+
Sbjct: 33  LSLKPSLK-------PHQTLRAVLSQNPAKTSQTTPFKHCFTKSPDGFLFCEGIKVQDVL 85

Query: 245 EGVERSPF 268
           + VER PF
Sbjct: 86  DSVERRPF 93


>ref|XP_004230896.1| PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like
           [Solanum lycopersicum]
          Length = 480

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
 Frame = +2

Query: 41  IPHKPTAAALSLYPSL----------RFPAFPRLKTLALRA-VSSQAPRAAEATEFRHCF 187
           + H P+      YPS            FP  P  + L++RA VS+  P   +  +F+HCF
Sbjct: 7   VSHSPSLHKSLKYPSNASQKLSFFKPNFPLKPISRNLSIRASVSTSEP---QTQKFQHCF 63

Query: 188 SKGEDGFLYCDGVRVQDVMEGVERSPF 268
            K EDGFLYC+GV+V+DVME VER PF
Sbjct: 64  KKCEDGFLYCEGVKVEDVMETVERRPF 90


>ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ricinus communis]
           gi|223547952|gb|EEF49444.1| diaminopimelate
           decarboxylase, putative [Ricinus communis]
          Length = 488

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +2

Query: 104 PRLKTLALRAVSSQAPRAAEAT-EFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           P+  +L L+AV SQ P   + T +F+HCF+K  DGFLYC+ ++VQDVME VE+ PF
Sbjct: 43  PKPLSLTLKAVLSQNPTLTQETAQFKHCFTKSNDGFLYCENLKVQDVMESVEKRPF 98


>gb|EOX97955.1| Pyridoxal-dependent decarboxylase family protein isoform 3
           [Theobroma cacao]
          Length = 411

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
 Frame = +2

Query: 26  SISPQIPHKPTAAALSLYPSLRFPAFP--------RLKTLALRAVSSQAPRAAEATEFRH 181
           S SP +P K     L+  P  +FP  P        +  +L+++AV SQ P       F+H
Sbjct: 9   SHSPSLP-KTLNHPLTQNPFSKFPILPLKPSQNVFKRHSLSIKAVLSQNPAKTLTPTFQH 67

Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           CF+K  DGFLYC+  +VQD+ME VE+ PF
Sbjct: 68  CFTKSPDGFLYCEDTKVQDIMEKVEKRPF 96


>gb|EOX97954.1| Pyridoxal-dependent decarboxylase family protein isoform 2
           [Theobroma cacao]
          Length = 407

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
 Frame = +2

Query: 26  SISPQIPHKPTAAALSLYPSLRFPAFP--------RLKTLALRAVSSQAPRAAEATEFRH 181
           S SP +P K     L+  P  +FP  P        +  +L+++AV SQ P       F+H
Sbjct: 9   SHSPSLP-KTLNHPLTQNPFSKFPILPLKPSQNVFKRHSLSIKAVLSQNPAKTLTPTFQH 67

Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           CF+K  DGFLYC+  +VQD+ME VE+ PF
Sbjct: 68  CFTKSPDGFLYCEDTKVQDIMEKVEKRPF 96


>gb|EOX97953.1| Pyridoxal-dependent decarboxylase family protein isoform 1
           [Theobroma cacao]
          Length = 487

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
 Frame = +2

Query: 26  SISPQIPHKPTAAALSLYPSLRFPAFP--------RLKTLALRAVSSQAPRAAEATEFRH 181
           S SP +P K     L+  P  +FP  P        +  +L+++AV SQ P       F+H
Sbjct: 9   SHSPSLP-KTLNHPLTQNPFSKFPILPLKPSQNVFKRHSLSIKAVLSQNPAKTLTPTFQH 67

Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           CF+K  DGFLYC+  +VQD+ME VE+ PF
Sbjct: 68  CFTKSPDGFLYCEDTKVQDIMEKVEKRPF 96


>gb|EPS59935.1| diaminopimelate decarboxylase, partial [Genlisea aurea]
          Length = 245

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = +2

Query: 95  PAFPRLKTLALRAVSSQAPRAAEATEFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           PA   LK+ + RAVSS  P      +FRHCFS+ ++GFLYC+GV+V+DVME  E+ PF
Sbjct: 33  PAAQSLKSRSARAVSS--PPETRTQKFRHCFSRSDEGFLYCEGVKVEDVMEVTEKRPF 88


>ref|XP_002313033.1| diaminopimelate decarboxylase family protein [Populus trichocarpa]
           gi|222849441|gb|EEE86988.1| diaminopimelate
           decarboxylase family protein [Populus trichocarpa]
          Length = 482

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2   AAQLFSRAS-ISPQIPHKPTAAALSLYPSLRFPAFPRLKTLALRAVSSQ---APRAAEAT 169
           AA  FS +  IS  + H      L   P+L F      K+ +L+AV SQ   A    + T
Sbjct: 3   AATNFSHSPFISKTLTHSLNHNPLPKNPTLPFKLS---KSYSLKAVISQQNPATATTQKT 59

Query: 170 EFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           +F+HCF+K +DGFLYC+ ++VQ++ME VE+ PF
Sbjct: 60  QFKHCFTKSQDGFLYCESLKVQEIMESVEKRPF 92


>ref|NP_001241015.1| uncharacterized protein LOC100786832 [Glycine max]
           gi|255636652|gb|ACU18663.1| unknown [Glycine max]
          Length = 488

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
 Frame = +2

Query: 77  YPSLRFPAFPRLKTLALRAVSSQ--APRAAEATE---FRHCFSKGEDGFLYCDGVRVQDV 241
           +P L+F +    K   LRAV SQ  A  A E T+   F+HCF+K EDG+LYC+G++V D+
Sbjct: 32  FPPLKFKS--TTKPRVLRAVLSQNAAKTAVEDTKNAHFQHCFTKSEDGYLYCEGLKVHDI 89

Query: 242 MEGVERSPF 268
           ME VER PF
Sbjct: 90  MESVERRPF 98


>ref|XP_006423350.1| hypothetical protein CICLE_v100282841mg, partial [Citrus
           clementina] gi|567861394|ref|XP_006423351.1|
           hypothetical protein CICLE_v100282841mg, partial [Citrus
           clementina] gi|557525284|gb|ESR36590.1| hypothetical
           protein CICLE_v100282841mg, partial [Citrus clementina]
           gi|557525285|gb|ESR36591.1| hypothetical protein
           CICLE_v100282841mg, partial [Citrus clementina]
          Length = 141

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = +2

Query: 35  PQIPHKPTAAALSLYPSLRFPAFPRLKTLALRAVSSQAPRAAEA--TEFRHCFSKGEDGF 208
           P+IP  P    L+   +L        K   L+AV SQ P  ++       HCFSK  DGF
Sbjct: 23  PKIPISPLKTTLNFQRTL--------KPFTLKAVLSQNPAKSQTHTAPVEHCFSKKADGF 74

Query: 209 LYCDGVRVQDVMEGVERSPF 268
           LYC+ VRVQDVME VE+ PF
Sbjct: 75  LYCEDVRVQDVMETVEKRPF 94


>ref|NP_001241982.1| uncharacterized protein LOC100809499 [Glycine max]
           gi|255671797|gb|ACU26531.1| diaminopimelate
           decarboxylase [Glycine max]
          Length = 488

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
 Frame = +2

Query: 26  SISPQIP----HKPTAAALS---LYPSLRFPAFPRLKTLALRAVSSQ--APRAAEATE-- 172
           S SP +P    H     ALS    +  L+F A    K  ALRAV SQ     + E T+  
Sbjct: 8   SHSPSLPKTYSHSLNQNALSQKLFFLPLKFKA--TTKPRALRAVLSQNAVKTSVEDTKNA 65

Query: 173 -FRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
            F+HCF+K EDG+LYC+G++V D+ME VER PF
Sbjct: 66  HFQHCFTKSEDGYLYCEGLKVHDIMESVERRPF 98


>gb|ESW34744.1| hypothetical protein PHAVU_001G177300g [Phaseolus vulgaris]
          Length = 487

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = +2

Query: 110 LKTLALRAVSSQ-----APRAAEATEFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           LK  ALRAV SQ     A   ++   F+HCF+K EDG+LYC+G++V D+ME VER PF
Sbjct: 40  LKPRALRAVLSQNASQTAVEDSKKAPFQHCFTKFEDGYLYCEGLKVHDIMESVERRPF 97


>ref|XP_002306119.1| diaminopimelate decarboxylase family protein [Populus trichocarpa]
           gi|222849083|gb|EEE86630.1| diaminopimelate
           decarboxylase family protein [Populus trichocarpa]
          Length = 487

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
 Frame = +2

Query: 110 LKTLALRAVSSQ----APRAAEATEFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
           LK L+L+AV SQ       A E T+F+HCF+K +DGFL C+ ++VQ++ME VE+ PF
Sbjct: 42  LKPLSLKAVISQQNPATTTAQETTQFKHCFTKSKDGFLCCENLKVQEIMENVEKRPF 98


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