BLASTX nr result
ID: Zingiber23_contig00030862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00030862
(618 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containi... 152 9e-35
ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group] g... 147 2e-33
gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indi... 147 2e-33
ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968... 147 2e-33
ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [S... 142 1e-31
ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [A... 135 7e-30
ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi... 132 1e-28
ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containi... 128 1e-27
gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma... 128 1e-27
ref|NP_175985.1| pentatricopeptide repeat-containing protein [Ar... 127 3e-27
ref|XP_006307708.1| hypothetical protein CARUB_v10009341mg [Caps... 124 2e-26
dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare] 124 2e-26
ref|XP_002891858.1| pentatricopeptide repeat-containing protein ... 124 2e-26
gb|AFK44188.1| unknown [Medicago truncatula] 122 8e-26
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi... 121 2e-25
ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutr... 120 3e-25
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi... 120 4e-25
ref|XP_002316702.1| predicted protein [Populus trichocarpa] 119 5e-25
gb|ESW31215.1| hypothetical protein PHAVU_002G219400g [Phaseolus... 119 9e-25
emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera] 119 9e-25
>ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Oryza brachyantha]
Length = 422
Score = 152 bits (383), Expect = 9e-35
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 7/211 (3%)
Frame = -3
Query: 613 SSAHHPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISK-SEGFLIHFITLYS 437
S HP+F DR ++ +VH+L GRRDLV IL + ++ SEGFLI I+LYS
Sbjct: 66 SGLSHPAFLADRPLFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYS 125
Query: 436 VAGMIDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGN 257
AGM DHS+ F + S+R+L ALLSA+ +N+ DR +A E I P
Sbjct: 126 AAGMPDHSLSTFRIISP----PSDRALSALLSAYHDNRLYDRAIQAFRTLPAELGIKPSV 181
Query: 256 KSYNVLLKALCSSSKVDEAFALLDEMPAK-GVEPDIVCYDIVLDGYLEMRDDSGFEKVLE 80
S+NVLLK+L ++ V A AL DEMP K GVEPDIV + +L GYL D + F++ L+
Sbjct: 182 VSHNVLLKSLVANGDVASARALFDEMPVKAGVEPDIVSCNEILKGYLNTADYAAFDQFLK 241
Query: 79 E-----IGKKKFRQTLNTYNCRIAALCAKGK 2
+ GK++ + + TYN R+AALC+KG+
Sbjct: 242 DNTTATAGKRRLKPNVGTYNLRMAALCSKGR 272
>ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated
salt-inducible protein-like [Oryza sativa Japonica
Group] gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza
sativa Japonica Group] gi|125584252|gb|EAZ25183.1|
hypothetical protein OsJ_08983 [Oryza sativa Japonica
Group] gi|215769058|dbj|BAH01287.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 423
Score = 147 bits (372), Expect = 2e-33
Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 7/211 (3%)
Frame = -3
Query: 613 SSAHHPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISK-SEGFLIHFITLYS 437
S HP+F DR I+ +VH+L GRRDLV IL + ++ SEGFLI I+LYS
Sbjct: 67 SGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYS 126
Query: 436 VAGMIDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGN 257
AGM DHS+ F + S+R+L ALLSA+ +N+ DR +A E I P
Sbjct: 127 AAGMPDHSLSTFRIVTP----PSDRALSALLSAYHDNRLYDRAIQAFRTLPAELGIKPSV 182
Query: 256 KSYNVLLKALCSSSKVDEAFALLDEMPAKG-VEPDIVCYDIVLDGYLEMRDDSGFEKVLE 80
S+NVLLK+ +S + A AL DEMP+K VEPDIV + +L GYL D + F++ L+
Sbjct: 183 VSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAFDQFLK 242
Query: 79 EI-----GKKKFRQTLNTYNCRIAALCAKGK 2
+ GK++ + ++TYN R+A+LC+KG+
Sbjct: 243 DNTTAAGGKRRLKPNVSTYNLRMASLCSKGR 273
>gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 147 bits (372), Expect = 2e-33
Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 7/211 (3%)
Frame = -3
Query: 613 SSAHHPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISK-SEGFLIHFITLYS 437
S HP+F DR I+ +VH+L GRRDLV IL + ++ SEGFLI I+LYS
Sbjct: 67 SGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYS 126
Query: 436 VAGMIDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGN 257
AGM DHS+ F + S+R+L ALLSA+ +N+ DR +A E I P
Sbjct: 127 AAGMPDHSLSTFRIVTP----PSDRALSALLSAYHDNRLYDRAIQAFRTLPAELGIKPSV 182
Query: 256 KSYNVLLKALCSSSKVDEAFALLDEMPAKG-VEPDIVCYDIVLDGYLEMRDDSGFEKVLE 80
S+NVLLK+ +S + A AL DEMP+K VEPDIV + +L GYL D + F++ L+
Sbjct: 183 VSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAFDQFLK 242
Query: 79 EI-----GKKKFRQTLNTYNCRIAALCAKGK 2
+ GK++ + ++TYN R+A+LC+KG+
Sbjct: 243 DNTTAAGGKRRLKPNVSTYNLRMASLCSKGR 273
>ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968|gb|ACG38952.1|
hypothetical protein [Zea mays]
gi|413939592|gb|AFW74143.1| hypothetical protein
ZEAMMB73_602318 [Zea mays]
Length = 419
Score = 147 bits (371), Expect = 2e-33
Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Frame = -3
Query: 613 SSAHHPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISK-SEGFLIHFITLYS 437
S HP+F DR ++ +VH+L GRRDLV +L + + SEGFL+ I+LYS
Sbjct: 66 SGLPHPAFLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYS 125
Query: 436 VAGMIDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGN 257
AGM DHS+ +F + S+R+L ALLSA+ +N+ DR A + E I PG
Sbjct: 126 AAGMPDHSLAVFRLVKPA----SDRALSALLSAYHDNRLYDRTVRAFNTLPAELGIKPGL 181
Query: 256 KSYNVLLKALCSSSKVDEAFALLDEMP-AKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLE 80
S+NVLLKAL +S V A L DEMP GV+PDIV + +L GYL D F+++++
Sbjct: 182 VSHNVLLKALVASGDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVK 241
Query: 79 EIG--KKKFRQTLNTYNCRIAALCAK 8
EI K++ + + TYN R+A LC+K
Sbjct: 242 EIAGPKRRLKPNVGTYNLRMALLCSK 267
>ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein
SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 142 bits (357), Expect = 1e-31
Identities = 83/206 (40%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Frame = -3
Query: 613 SSAHHPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISK-SEGFLIHFITLYS 437
S HP+F DR ++ +VH+L GRRDLV +L + + SEGFL+ I+LYS
Sbjct: 66 SGLPHPAFLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYS 125
Query: 436 VAGMIDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGN 257
AGM DHS+ +F + S+R+L ALLS + +N+ DR A + E I PG
Sbjct: 126 AAGMPDHSLTVFRLVNP----PSDRALSALLSTYHDNRLYDRAVRAFNTLPAELGIKPGL 181
Query: 256 KSYNVLLKALCSSSKVDEAFALLDEMP-AKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLE 80
S+NVLLKAL +S + A + D+MP GV+PDIV + +L GYL DD+ F+++++
Sbjct: 182 VSHNVLLKALVASGDIAAARSAFDKMPDTAGVQPDIVSCNEILKGYLSTGDDAAFDQLVK 241
Query: 79 EIG--KKKFRQTLNTYNCRIAALCAK 8
EI ++ + + TYN R+A LC+K
Sbjct: 242 EIAGPNRRLKPNVGTYNLRMAMLCSK 267
>ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [Amborella trichopoda]
gi|548851196|gb|ERN09472.1| hypothetical protein
AMTR_s00029p00104100 [Amborella trichopoda]
Length = 454
Score = 135 bits (341), Expect = 7e-30
Identities = 72/195 (36%), Positives = 109/195 (55%)
Frame = -3
Query: 598 PSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMID 419
P F DR + + V KL + R DL+E+ LE K S EGF+I I LYS AGM+D
Sbjct: 120 PRFRHDRAAFSAFVQKLAGYERFDLIEQALESHKK-PPFSLMEGFIIRLILLYSEAGMVD 178
Query: 418 HSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVL 239
++ F M L C RSE+S A LS L NK+ D + D ++ I P +Y+++
Sbjct: 179 KALDTFYEMDELECPRSEKSFSATLSGLLLNKRFDDVHRLFDEIPNKFDISPTVFTYDII 238
Query: 238 LKALCSSSKVDEAFALLDEMPAKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLEEIGKKKF 59
++A C +D AF +L +M G++PD+V Y+ ++DG+L D + +++L+E+ +K
Sbjct: 239 IRAFCEEHLLDSAFEMLGKMEKIGIKPDVVSYNTLIDGFLRAGDQTRVDELLKEMTEKGC 298
Query: 58 RQTLNTYNCRIAALC 14
L TYN RI C
Sbjct: 299 APDLVTYNLRILGFC 313
>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product
[Vitis vinifera]
Length = 386
Score = 132 bits (331), Expect = 1e-28
Identities = 73/202 (36%), Positives = 113/202 (55%), Gaps = 5/202 (2%)
Frame = -3
Query: 604 HHPS-----FYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLY 440
HH S F R +Y+ + +L R GR DLVER+++ K+ ++EGF I I LY
Sbjct: 48 HHQSSNFARFRRHRPLYQLSCRRLSRSGRLDLVERLIDHQKTLPH-PRTEGFWIRLIMLY 106
Query: 439 SVAGMIDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPG 260
S +GM+DH++R F M + +E+SLCA+L+ +L+N +D++ + E + PG
Sbjct: 107 STSGMVDHALRTFHQMVQDRVQLTEKSLCAILTVYLDNDLIDQLHTVFNTMPSEIGVSPG 166
Query: 259 NKSYNVLLKALCSSSKVDEAFALLDEMPAKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLE 80
KSY+++LKA C ++ A LL +M PDI Y+++L+ Y E D F+++L+
Sbjct: 167 TKSYSLVLKAFCQQKDMESARKLLHKME----NPDIGSYNVLLEAYSENGDGVEFDEILK 222
Query: 79 EIGKKKFRQTLNTYNCRIAALC 14
EI K TYN RI C
Sbjct: 223 EIKNKGLEHDCTTYNHRILRFC 244
>ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 423
Score = 128 bits (322), Expect = 1e-27
Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Frame = -3
Query: 595 SFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISK-SEGFLIHFITLYSVAGMID 419
+F GDR I+ AV +L GRRDLV IL + + SEGFLI I+LY+ AGM
Sbjct: 75 AFLGDRPIFSLAVTRLASAGRRDLVFSILSSSLTALPAPHPSEGFLIRLISLYAAAGMPQ 134
Query: 418 HSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVL 239
HS+ F + ++R ALL+A+ + Q D A E S PG S+NVL
Sbjct: 135 HSLSTFRLVKPA----TDRVFSALLAAYHDTAQHDLAVTAFRDLPAELSFQPGVVSHNVL 190
Query: 238 LKALCSSSKVDEAFALLDEMPAK-GVEPDIVCYDIVLDGYLEMRDDSGFEKVLEEI--GK 68
LK++ ++ V A + DEM K GV+PDIV + VL GYL+ D + F+++ +EI GK
Sbjct: 191 LKSMVATGDVAGARQVFDEMADKAGVQPDIVSCNEVLRGYLKTADYAAFDQLFKEIAGGK 250
Query: 67 KKFRQTLNTYNCRIAALCAKGK 2
++ + + TYN R+AALCAKG+
Sbjct: 251 RRLKPNVTTYNLRMAALCAKGR 272
>gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma cacao]
Length = 395
Score = 128 bits (321), Expect = 1e-27
Identities = 73/205 (35%), Positives = 116/205 (56%), Gaps = 8/205 (3%)
Frame = -3
Query: 604 HHPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAK---SNADISKSEGFLIHFITLYSV 434
H P+F R IY ++ KL R R DLV+ +L+ K NA KSEGF I I LYS
Sbjct: 56 HLPTFLRHRPIYHLSIRKLARANRLDLVDSLLQAQKLHSQNASALKSEGFWIRLIMLYSN 115
Query: 433 AGMIDHSVRLFEAMPSLGCKR-----SERSLCALLSAFLENKQVDRIQEAIDRCAKEYSI 269
AGM+ +++ E + C+ SE+SLCA+L+ +L N ++I E+ ++ +
Sbjct: 116 AGMVPQALQTLEDL----CQNRYSIVSEKSLCAILTVYLNNGMFEQIYESFKTIPEKLGV 171
Query: 268 VPGNKSYNVLLKALCSSSKVDEAFALLDEMPAKGVEPDIVCYDIVLDGYLEMRDDSGFEK 89
P S+N++LKA +K++ A +++M V P+I Y+I+L GYL+ D++GF+
Sbjct: 172 KPSVVSHNLILKAFVKENKLESALEWVEKMD---VSPNIATYNILLGGYLKNGDENGFDG 228
Query: 88 VLEEIGKKKFRQTLNTYNCRIAALC 14
++E+ +K L TYN RI+ C
Sbjct: 229 AMKEVSRKGLEGNLTTYNHRISRFC 253
>ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14
[Arabidopsis thaliana] gi|18650654|gb|AAL75896.1|
At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis
thaliana] gi|332195194|gb|AEE33315.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 127 bits (318), Expect = 3e-27
Identities = 76/192 (39%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
Frame = -3
Query: 574 IYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHSVRLFEA 395
+Y V +LV R VE ILE K D+SK EGF I+LY AGM +++ ++FE
Sbjct: 76 VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSK-EGFAARIISLYGKAGMFENAQKVFEE 134
Query: 394 MPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLKALCSSS 215
MP+ CKRS S ALLSA+ +K+ D ++E + + SI P SYN L+KALC
Sbjct: 135 MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKD 194
Query: 214 KVDEAFALLDEMPAKGVEPDIVCYD-IVLDGYLEMRDDSGFEKVLEEIGKKKFRQTLNTY 38
+ EA ALLDE+ KG++PDIV ++ ++L YL+ + + G E++ ++ +K + TY
Sbjct: 195 SLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG-EEIWAKMVEKNVAIDIRTY 253
Query: 37 NCRIAALCAKGK 2
N R+ L + K
Sbjct: 254 NARLLGLANEAK 265
>ref|XP_006307708.1| hypothetical protein CARUB_v10009341mg [Capsella rubella]
gi|482576419|gb|EOA40606.1| hypothetical protein
CARUB_v10009341mg [Capsella rubella]
Length = 401
Score = 124 bits (311), Expect = 2e-26
Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 1/193 (0%)
Frame = -3
Query: 592 FYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHS 413
F + +Y V +LV R VE ILE K D+SK EGF I+LY AG+ +++
Sbjct: 73 FRNNIAVYDRTVRRLVAAKRLHFVEEILEEQKKYRDMSK-EGFAARIISLYGKAGLFENA 131
Query: 412 VRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLK 233
++F+ MP CKRS S ALLSA+ +K+ D ++E + + SI P SYN L+K
Sbjct: 132 QKVFDEMPDRNCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIK 191
Query: 232 ALCSSSKVDEAFALLDEMPAKGVEPDIVCYD-IVLDGYLEMRDDSGFEKVLEEIGKKKFR 56
ALC + EA ALLDE+ KG++PDIV ++ ++L YL+ + + G E++ ++ +K
Sbjct: 192 ALCEKDSLPEAVALLDEIENKGLKPDIVTFNTVLLSSYLKGQFELG-EEIWAKMVEKNVT 250
Query: 55 QTLNTYNCRIAAL 17
+ TYN R+ L
Sbjct: 251 IDIRTYNARLLGL 263
>dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 124 bits (311), Expect = 2e-26
Identities = 80/204 (39%), Positives = 116/204 (56%), Gaps = 4/204 (1%)
Frame = -3
Query: 601 HPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISK-SEGFLIHFITLYSVAGM 425
H F GDR I+ AV +L R DLV +L + + SEGFLI I LY+ AGM
Sbjct: 72 HTPFLGDRSIFSLAVSRLTAAARPDLVSSVLSASLTALPAPHPSEGFLIRLIALYADAGM 131
Query: 424 IDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYN 245
HS+ F L S+R+L ALL+A+ + Q R +A + E SI PG S+N
Sbjct: 132 PTHSLSTFR----LVVPPSDRALSALLAAYHDAGQPARAIQAFRDLSAELSIAPGVVSHN 187
Query: 244 VLLKALCSSSKVDEAFALLDEMPAK-GVEPDIVCYDIVLDGYLEMRDDSGFEKVLEEI-- 74
VLLK + ++ V A + D MP K G++PDIV + +L GYL+ D + F+ +L+E+
Sbjct: 188 VLLKCMVATGDVAGARQVFDGMPDKAGLQPDIVSCNEMLKGYLKTGDYAAFDLLLKEVTG 247
Query: 73 GKKKFRQTLNTYNCRIAALCAKGK 2
GK++ + + TY R++ LCAKG+
Sbjct: 248 GKRRLKPNVTTYKLRMSGLCAKGR 271
>ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297337700|gb|EFH68117.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 395
Score = 124 bits (311), Expect = 2e-26
Identities = 75/198 (37%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = -3
Query: 592 FYGDREIYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHS 413
F + +Y V +LV R VE ILE K D+SK EGF I+LY AGM +++
Sbjct: 67 FRNNIAVYDRTVRRLVAAKRLHFVEEILEEQKKYRDMSK-EGFAARIISLYGKAGMFENA 125
Query: 412 VRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLK 233
++F+ MP CKRS S ALLSA+ +K+ D +++ + + SI P SYN L+K
Sbjct: 126 QKVFDEMPDRNCKRSVLSFNALLSAYGLSKKFDVVEQLFNELPGKLSIKPDIVSYNTLIK 185
Query: 232 ALCSSSKVDEAFALLDEMPAKGVEPDIVCYD-IVLDGYLEMRDDSGFEKVLEEIGKKKFR 56
ALC + EA ALLDE KG++PDIV ++ ++L YL+ + + G E++ ++ +K
Sbjct: 186 ALCEKDSLPEAVALLDEFENKGLKPDIVTFNTLLLSSYLKGQFELG-EEIWAKLVEKNVP 244
Query: 55 QTLNTYNCRIAALCAKGK 2
+ TYN R+ L ++ K
Sbjct: 245 IDIRTYNARLLGLASEVK 262
>gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 122 bits (306), Expect = 8e-26
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 1/187 (0%)
Frame = -3
Query: 574 IYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHSVRLFEA 395
IY+ V +L R V I+E KS ADIS +EGF ITLY + M H+ +LF+
Sbjct: 55 IYEDTVRRLAGAKRFRWVRDIIEHQKSYADIS-NEGFSARLITLYGKSNMHRHAQKLFDE 113
Query: 394 MPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLKALCSSS 215
MP C+RS SL ALL+A+L +KQ D ++ + + S+ P SYN +KAL
Sbjct: 114 MPQRNCERSVLSLNALLAAYLHSKQYDVVERLFKKLPVQLSVKPDLVSYNTYIKALLEKG 173
Query: 214 KVDEAFALLDEMPAKGVEPDIVCYDIVLDG-YLEMRDDSGFEKVLEEIGKKKFRQTLNTY 38
D A ++L+EM GVE D++ ++ +LDG Y + R + G EK+ E++G+K + TY
Sbjct: 174 SFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDG-EKLWEKLGEKNVVPNIRTY 232
Query: 37 NCRIAAL 17
N R+ L
Sbjct: 233 NARLLGL 239
>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 121 bits (303), Expect = 2e-25
Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 1/192 (0%)
Frame = -3
Query: 574 IYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHSVRLFEA 395
IY+ V +L R +E ILE K DIS+ EGF + I+LY +GM DH+ ++F+
Sbjct: 61 IYEETVRRLASAKRFRWIEEILEEQKKYKDISR-EGFAVRLISLYGKSGMFDHAFKVFDE 119
Query: 394 MPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLKALCSSS 215
MP C+RS S ALL A + +K+ D+++ + S+ P SYN+++K LC
Sbjct: 120 MPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMG 179
Query: 214 KVDEAFALLDEMPAKGVEPDIVCYDIVLDG-YLEMRDDSGFEKVLEEIGKKKFRQTLNTY 38
+D A +LDEM K +EPD++ ++ +L+G Y R G EK+ + KK + +Y
Sbjct: 180 SMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDG-EKIWGRMEKKNILPDIRSY 238
Query: 37 NCRIAALCAKGK 2
N ++ L + K
Sbjct: 239 NAKLVGLVSSEK 250
>ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutrema salsugineum]
gi|557101269|gb|ESQ41632.1| hypothetical protein
EUTSA_v10013226mg [Eutrema salsugineum]
Length = 530
Score = 120 bits (301), Expect = 3e-25
Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 1/201 (0%)
Frame = -3
Query: 601 HPSFYGDREIYKSAVHKLVRFGRRDLVERILEGAKSN-ADISKSEGFLIHFITLYSVAGM 425
HP F + + Y S + KL R D VE +L +S+ I E I + Y +AG
Sbjct: 71 HPGFTHNYDTYHSILFKLSRARAFDPVEPLLADLRSSYPPIKCGENLFIDLLRNYGLAGR 130
Query: 424 IDHSVRLFEAMPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYN 245
+ SVR+F +P G KRS RSL LL+ ++NK+ D + C + + I P + N
Sbjct: 131 YESSVRIFLRIPDFGVKRSVRSLNTLLNVLIQNKRFDLVHAMFKNCKESFGITPNIFTCN 190
Query: 244 VLLKALCSSSKVDEAFALLDEMPAKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLEEIGKK 65
+L+KALC + ++ AF +LDE+PA G+ P++V Y +L GY+ D ++VL E+ +
Sbjct: 191 LLVKALCKKNDIESAFKVLDEIPAMGLVPNLVTYTTILGGYVARGDMEAAKRVLREMMDR 250
Query: 64 KFRQTLNTYNCRIAALCAKGK 2
+ TY + C G+
Sbjct: 251 GWDPDATTYTVLMDGYCKLGR 271
>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 120 bits (300), Expect = 4e-25
Identities = 66/190 (34%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Frame = -3
Query: 574 IYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHSVRLFEA 395
IY+ V +L R +E ILE K DIS+ EGF + ITLY +GM DH+ ++F+
Sbjct: 61 IYEETVRRLASAKRFRWIEEILEEQKKYKDISR-EGFAVRLITLYGKSGMFDHAFKVFDE 119
Query: 394 MPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLKALCSSS 215
MP C+RS S ALL A + +K+ D+++ + S+ P SYN+++ LC
Sbjct: 120 MPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMG 179
Query: 214 KVDEAFALLDEMPAKGVEPDIVCYDIVLDG-YLEMRDDSGFEKVLEEIGKKKFRQTLNTY 38
+D A +LDEM K +EPD++ ++ +L+G Y R G EK+ + KK + +Y
Sbjct: 180 SMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDG-EKIWGRMEKKNILPDIRSY 238
Query: 37 NCRIAALCAK 8
N ++ L ++
Sbjct: 239 NAKLVGLVSE 248
>ref|XP_002316702.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 119 bits (299), Expect = 5e-25
Identities = 66/186 (35%), Positives = 103/186 (55%)
Frame = -3
Query: 574 IYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHSVRLFEA 395
+YK+++H+L + + VE ILE K DI K EGF I+LY VAGM D++ ++F+
Sbjct: 61 VYKNSIHRLAAARKFNYVEEILEDQKQYEDIYK-EGFNARLISLYGVAGMFDNARKVFDE 119
Query: 394 MPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLKALCSSS 215
M C R+ S ALL A + +K+ D + +KE I P SYN +LKA C
Sbjct: 120 MFERKCARTVVSFNALLGACVNSKKFDEAEGLFKGLSKELEIEPDLVSYNTVLKAFCEMG 179
Query: 214 KVDEAFALLDEMPAKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLEEIGKKKFRQTLNTYN 35
+D A LLDEM KG+EPD++ ++ +L G+ E++ E++ +K + +YN
Sbjct: 180 SMDSAATLLDEMEKKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDIRSYN 239
Query: 34 CRIAAL 17
++ L
Sbjct: 240 AKLLGL 245
>gb|ESW31215.1| hypothetical protein PHAVU_002G219400g [Phaseolus vulgaris]
Length = 405
Score = 119 bits (297), Expect = 9e-25
Identities = 70/191 (36%), Positives = 102/191 (53%)
Frame = -3
Query: 574 IYKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHSVRLFEA 395
IY+ V +L R R V ILE K +DIS +EGF I+LY +GM H+ ++F+
Sbjct: 84 IYEDTVRRLARAKRFRWVRDILEHQKQYSDIS-NEGFSSRLISLYGKSGMAKHARKVFDE 142
Query: 394 MPSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLKALCSSS 215
MP C RS SL ALL+A+L +K+ D ++E + SI P SYN L+KA C
Sbjct: 143 MPQRKCDRSVLSLNALLAAYLHSKKYDVVEELFRALPTQLSIEPDLVSYNTLIKAFCEKG 202
Query: 214 KVDEAFALLDEMPAKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLEEIGKKKFRQTLNTYN 35
D A +++ EM KGV+PD + ++ +LDG EKV ++G K + +Y
Sbjct: 203 SFDSALSVVKEMEEKGVDPDSITFNTLLDGLYSKGCFEDGEKVWGQMGAKNVAPDVRSYC 262
Query: 34 CRIAALCAKGK 2
R+ L + K
Sbjct: 263 SRLVGLAGEKK 273
>emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 119 bits (297), Expect = 9e-25
Identities = 62/190 (32%), Positives = 107/190 (56%)
Frame = -3
Query: 571 YKSAVHKLVRFGRRDLVERILEGAKSNADISKSEGFLIHFITLYSVAGMIDHSVRLFEAM 392
Y+ AV L + + +E ILE K +IS +E F + ITLY AGM +H+ +LF+ M
Sbjct: 173 YEKAVLTLAKAKKFSFIEDILEHQKQYNEIS-TEVFAVRLITLYGKAGMFEHAHKLFDEM 231
Query: 391 PSLGCKRSERSLCALLSAFLENKQVDRIQEAIDRCAKEYSIVPGNKSYNVLLKALCSSSK 212
P L C+R+ S ALLSA + +K+ D+I + IVP SYN+L+ A C
Sbjct: 232 PKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGS 291
Query: 211 VDEAFALLDEMPAKGVEPDIVCYDIVLDGYLEMRDDSGFEKVLEEIGKKKFRQTLNTYNC 32
+D A ++LDEM G+EPD++ ++ +L+ + + ++ EK+ + + K + +YN
Sbjct: 292 LDSALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNA 351
Query: 31 RIAALCAKGK 2
++ + ++ +
Sbjct: 352 KLRGVISENR 361