BLASTX nr result
ID: Zingiber23_contig00030807
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00030807
(199 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_006644106.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
gb|EMT12044.1| hypothetical protein F775_21441 [Aegilops tauschii] 67 3e-09
dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare] 65 9e-09
gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indi... 62 8e-08
ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group] g... 62 8e-08
ref|XP_004967563.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily p... 61 2e-07
ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [S... 61 2e-07
gb|ACN31600.1| unknown [Zea mays] 60 2e-07
ref|XP_004288536.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 59 9e-07
emb|CBI36964.3| unnamed protein product [Vitis vinifera] 59 9e-07
ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linu... 57 2e-06
gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indi... 57 3e-06
ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group] g... 57 3e-06
emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera] 56 4e-06
gb|ESW17132.1| hypothetical protein PHAVU_007G213200g [Phaseolus... 56 6e-06
gb|ESW17131.1| hypothetical protein PHAVU_007G213200g [Phaseolus... 56 6e-06
>ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F+ LP AKN TYGALL+ YCS K + +KA L+++M L IAS+T NLMSLYM+
Sbjct: 170 FNGLPDPAKNHRTYGALLNCYCSSKKE--EKATDLFHKMDDLGIASSTLPFNNLMSLYMK 227
Query: 17 LGQHE 3
LGQH+
Sbjct: 228 LGQHK 232
>ref|XP_006644106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Oryza brachyantha]
Length = 412
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F+DLP AKN TYGALL+ YCS K + +KA +Y +M L I+S+T NLMSLY++
Sbjct: 37 FADLPDPAKNHRTYGALLNCYCSAKME--EKAMDVYRKMDELGISSSTLPINNLMSLYVK 94
Query: 17 LGQHE 3
LGQH+
Sbjct: 95 LGQHK 99
>gb|EMT12044.1| hypothetical protein F775_21441 [Aegilops tauschii]
Length = 400
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F LP AKN TYGALL+ YCS K + +KA LY +M L I+S+T NLMSLYM+
Sbjct: 26 FDGLPDPAKNHRTYGALLNCYCSSKKE--EKATDLYRKMDELGISSSTLPINNLMSLYMK 83
Query: 17 LGQHE 3
LGQH+
Sbjct: 84 LGQHK 88
>dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F LP AKN T+GALL+ YCS K + +KA LY +M L I+S+T NLMSLYM+
Sbjct: 176 FEGLPDPAKNHRTFGALLNCYCSSKEE--EKATDLYRKMDELGISSSTLPINNLMSLYMK 233
Query: 17 LGQHE 3
LGQH+
Sbjct: 234 LGQHK 238
>gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F+ LP KN TYGALL+ YCS K + DKA +Y +M L I+S+T NLMSLY++
Sbjct: 147 FAGLPDPGKNHKTYGALLNCYCSAKME--DKATDIYRKMDELGISSSTLPINNLMSLYVK 204
Query: 17 LGQH 6
+GQH
Sbjct: 205 IGQH 208
>ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein
[Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa
Japonica Group] gi|215694668|dbj|BAG89859.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 522
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F+ LP KN TYGALL+ YCS K + DKA +Y +M L I+S+T NLMSLY++
Sbjct: 147 FAGLPDPGKNHKTYGALLNCYCSAKME--DKATDIYRKMDELGISSSTLPINNLMSLYVK 204
Query: 17 LGQH 6
+GQH
Sbjct: 205 IGQH 208
>ref|XP_004967563.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like isoform X1 [Setaria italica]
Length = 520
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F+ LP AKN TYGALL+ YCS K + +KA +Y +M L I S+ NLMSLYM+
Sbjct: 145 FASLPDPAKNHRTYGALLNCYCSAKME--EKAIDIYRKMDELGICSSRLPINNLMSLYMK 202
Query: 17 LGQH 6
LG+H
Sbjct: 203 LGRH 206
>gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 501
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -3
Query: 194 SDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMRL 15
S LP AKN+ TYGALL+ YC+ K DKA SL+ +M L +NT NLM LYMRL
Sbjct: 130 SALPPSAKNQLTYGALLNCYCNNLMK--DKASSLFQKMDELRFTNNTLPFNNLMCLYMRL 187
Query: 14 GQHE 3
GQ E
Sbjct: 188 GQPE 191
>ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein
SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F++LP AKN TYGALLS YCS K + +KA LY +M L S T NLMSLYM+
Sbjct: 156 FANLPDPAKNHRTYGALLSCYCSAKME--EKATYLYRQMDELGFWSGTLPINNLMSLYMK 213
Query: 17 LGQH 6
L QH
Sbjct: 214 LDQH 217
>gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F++LP AKN TYG+LLS YCS K + +KA +LY +M L I S+T NLMSLYM+
Sbjct: 140 FANLPDPAKNHRTYGSLLSCYCSAKME--EKATNLYRQMDELGIWSSTLPINNLMSLYMK 197
Query: 17 LGQH 6
L Q+
Sbjct: 198 LDQY 201
>ref|XP_004288536.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 446
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
FS+LP AKNK TYG+LL+ YC E + +KA +LY +M LN + V NLM+LYMR
Sbjct: 66 FSNLPQSAKNKLTYGSLLNCYCKEVME--EKALALYKKMDELNYVDSALVFNNLMALYMR 123
Query: 17 LGQHE 3
Q E
Sbjct: 124 KKQPE 128
>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F++L AKN TYG LL+ YC EK + +KA +L+ +M LN AS + NLMSL+MR
Sbjct: 134 FNNLSPSAKNLLTYGTLLNCYCKEKME--EKALALFEKMDELNFASTSLTFNNLMSLHMR 191
Query: 17 LGQHE 3
LG+ E
Sbjct: 192 LGKPE 196
>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F++L AKN TYG LL+ YC EK + +KA +L+ +M LN AS + NLMSL+MR
Sbjct: 173 FNNLSPSAKNLLTYGTLLNCYCKEKME--EKALALFEKMDELNFASTSLTFNNLMSLHMR 230
Query: 17 LGQHE 3
LG+ E
Sbjct: 231 LGKPE 235
>ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Solanum tuberosum]
Length = 495
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/65 (49%), Positives = 39/65 (60%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F L +N+ TYGALL+ YC EK ADKA S + +M L + + NLMSLYMR
Sbjct: 122 FGGLSPSMQNQSTYGALLNCYCVEKM--ADKALSFFEKMDQLKFTNKSLAFNNLMSLYMR 179
Query: 17 LGQHE 3
LGQ E
Sbjct: 180 LGQPE 184
>gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F+ L AKN TYG+LL+SYC K +++KA L+ +M L N+ NLMS+YMR
Sbjct: 134 FNGLVPSAKNPATYGSLLNSYC--KKLDSEKALQLFQKMDKLKFFRNSLPFNNLMSMYMR 191
Query: 17 LGQHE 3
LGQ E
Sbjct: 192 LGQQE 196
>gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = -3
Query: 197 FSDLP--VQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLY 24
FS +P + +N TYGALL+ YCS K + +KA ++Y M L I S+T++ NLM LY
Sbjct: 139 FSGIPSFTRDQNHRTYGALLNCYCSAKME--EKATNIYRRMDELGIPSSTKLMNNLMGLY 196
Query: 23 MRLGQH 6
+ LGQH
Sbjct: 197 LELGQH 202
>ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein
[Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa
Japonica Group] gi|222618277|gb|EEE54409.1| hypothetical
protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = -3
Query: 197 FSDLP--VQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLY 24
FS +P + +N TYGALL+ YCS K + +KA ++Y M L I S+T++ NLM LY
Sbjct: 139 FSGIPSFTRDQNHRTYGALLNCYCSAKME--EKATNIYRRMDELGIPSSTKLMNNLMGLY 196
Query: 23 MRLGQH 6
+ LGQH
Sbjct: 197 LELGQH 202
>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
F+ L AK TYGALL+ YC E DKA L+ ++K LN S+ + N++SLY+R
Sbjct: 119 FNSLQESAKTNKTYGALLNCYCKENM--VDKAVELFKKLKELNFVSSALSYNNMISLYLR 176
Query: 17 LGQHE 3
+GQ E
Sbjct: 177 VGQPE 181
>gb|ESW17132.1| hypothetical protein PHAVU_007G213200g [Phaseolus vulgaris]
Length = 393
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
FS LP AKNK+TYGALL+ YC E K DKA S +++M L ++ + NLMSL+MR
Sbjct: 35 FSGLPDPAKNKYTYGALLNCYCKELMK--DKALSHFHKMDELGYVTSLSYN-NLMSLFMR 91
Query: 17 LGQ 9
G+
Sbjct: 92 NGE 94
>gb|ESW17131.1| hypothetical protein PHAVU_007G213200g [Phaseolus vulgaris]
Length = 476
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = -3
Query: 197 FSDLPVQAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLNIASNTEVHFNLMSLYMR 18
FS LP AKNK+TYGALL+ YC E K DKA S +++M L ++ + NLMSL+MR
Sbjct: 118 FSGLPDPAKNKYTYGALLNCYCKELMK--DKALSHFHKMDELGYVTSLSYN-NLMSLFMR 174
Query: 17 LGQ 9
G+
Sbjct: 175 NGE 177