BLASTX nr result
ID: Zingiber23_contig00030685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00030685
(236 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002333929.1| predicted protein [Populus trichocarpa] gi|5... 117 2e-24
ref|XP_004250405.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 115 6e-24
ref|XP_002325986.1| hypothetical protein POPTR_0019s11200g [Popu... 114 1e-23
emb|CBI18269.3| unnamed protein product [Vitis vinifera] 114 1e-23
ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16... 114 1e-23
ref|XP_003556191.2| PREDICTED: E3 ubiquitin-protein ligase RNF13... 114 2e-23
ref|XP_006361369.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 113 2e-23
ref|XP_006353622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 113 3e-23
ref|XP_004972421.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 113 3e-23
ref|XP_004972418.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 113 3e-23
ref|XP_006830423.1| hypothetical protein AMTR_s00118p00107060 [A... 112 4e-23
ref|XP_004496378.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 112 4e-23
gb|EOY17226.1| Protease-associated RING/U-box zinc finger family... 112 5e-23
tpg|DAA47491.1| TPA: putative protease-associated RING zinc fing... 112 5e-23
gb|ACN25743.1| unknown [Zea mays] gi|414868935|tpg|DAA47492.1| T... 112 5e-23
ref|NP_001147957.1| RING finger protein 13 precursor [Zea mays] ... 112 5e-23
ref|XP_002533876.1| zinc finger protein, putative [Ricinus commu... 112 7e-23
ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 111 9e-23
gb|EXB57740.1| E3 ubiquitin-protein ligase [Morus notabilis] 111 1e-22
gb|ESW15632.1| hypothetical protein PHAVU_007G088600g [Phaseolus... 111 1e-22
>ref|XP_002333929.1| predicted protein [Populus trichocarpa]
gi|566200723|ref|XP_006376277.1| protease-associated
zinc finger family protein [Populus trichocarpa]
gi|550325553|gb|ERP54074.1| protease-associated zinc
finger family protein [Populus trichocarpa]
Length = 461
Score = 117 bits (293), Expect = 2e-24
Identities = 55/78 (70%), Positives = 68/78 (87%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELW++P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE S S++REFHGMSS
Sbjct: 158 ELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFIRRHRIRREHSHSSRVREFHGMSSR 217
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FTSV+EDNC
Sbjct: 218 LVKAMPSLTFTSVLEDNC 235
>ref|XP_004250405.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Solanum
lycopersicum]
Length = 444
Score = 115 bits (288), Expect = 6e-24
Identities = 54/78 (69%), Positives = 68/78 (87%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+WI+P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRR++ S+ REFHGMSSH
Sbjct: 152 EVWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRDRPRASRFREFHGMSSH 211
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FTSV+EDNC
Sbjct: 212 LVKAMPSLIFTSVLEDNC 229
>ref|XP_002325986.1| hypothetical protein POPTR_0019s11200g [Populus trichocarpa]
gi|222862861|gb|EEF00368.1| hypothetical protein
POPTR_0019s11200g [Populus trichocarpa]
Length = 437
Score = 114 bits (286), Expect = 1e-23
Identities = 54/78 (69%), Positives = 67/78 (85%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELWI+P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE+ S++REFHGMSS
Sbjct: 149 ELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRSSRVREFHGMSSR 208
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FTS +EDNC
Sbjct: 209 LVKAMPSLTFTSALEDNC 226
>emb|CBI18269.3| unnamed protein product [Vitis vinifera]
Length = 424
Score = 114 bits (285), Expect = 1e-23
Identities = 53/78 (67%), Positives = 69/78 (88%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELWI+P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRR++ +S++REFHGMSS
Sbjct: 137 ELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRQRPRVSRVREFHGMSSR 196
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT+V+EDNC
Sbjct: 197 LVKAMPSLIFTTVLEDNC 214
>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
Length = 446
Score = 114 bits (285), Expect = 1e-23
Identities = 53/78 (67%), Positives = 69/78 (88%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELWI+P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRR++ +S++REFHGMSS
Sbjct: 153 ELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRQRPRVSRVREFHGMSSR 212
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT+V+EDNC
Sbjct: 213 LVKAMPSLIFTTVLEDNC 230
>ref|XP_003556191.2| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Glycine max]
Length = 510
Score = 114 bits (284), Expect = 2e-23
Identities = 53/78 (67%), Positives = 67/78 (85%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+W++PT +NSAW+I+AISF+SLLA+SAV A CF +R++ IRRE+ S +REFHGMSS
Sbjct: 166 EIWLIPTFENSAWSIMAISFISLLAMSAVLATCFFVRKHRIRRERPRASLVREFHGMSSR 225
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FTSV+EDNC
Sbjct: 226 LVKAMPSLVFTSVLEDNC 243
>ref|XP_006361369.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Solanum
tuberosum]
Length = 444
Score = 113 bits (283), Expect = 2e-23
Identities = 53/78 (67%), Positives = 68/78 (87%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+WI+P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRR++ S++REFHGMSS
Sbjct: 152 EVWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRDRPRASRVREFHGMSSR 211
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FTSV+EDNC
Sbjct: 212 LVKAMPSLIFTSVLEDNC 229
>ref|XP_006353622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Solanum
tuberosum]
Length = 441
Score = 113 bits (282), Expect = 3e-23
Identities = 53/77 (68%), Positives = 68/77 (88%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+W++PT++NSAW+I+A SF+SLLA+SAV AMCF +RR+ IRRE+ S++REFHG+SS
Sbjct: 151 EVWLIPTLENSAWSIMATSFISLLAMSAVLAMCFFVRRHHIRRERPQASRVREFHGISSR 210
Query: 182 LVKAMPSLEFTSVVEDN 232
LVKAMPSL FTSVVEDN
Sbjct: 211 LVKAMPSLIFTSVVEDN 227
>ref|XP_004972421.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like isoform X4
[Setaria italica]
Length = 478
Score = 113 bits (282), Expect = 3e-23
Identities = 54/78 (69%), Positives = 66/78 (84%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELWI+PT +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRR+++ + Q REFHGMSS
Sbjct: 155 ELWIIPTYENSAWSIMAISFISLLAMSAVLATCFFVRRHQIRRDRARIPQAREFHGMSSQ 214
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT V EDNC
Sbjct: 215 LVKAMPSLIFTKVQEDNC 232
>ref|XP_004972418.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like isoform X1
[Setaria italica] gi|514791806|ref|XP_004972419.1|
PREDICTED: E3 ubiquitin-protein ligase RNF13-like
isoform X2 [Setaria italica]
gi|514791810|ref|XP_004972420.1| PREDICTED: E3
ubiquitin-protein ligase RNF13-like isoform X3 [Setaria
italica]
Length = 507
Score = 113 bits (282), Expect = 3e-23
Identities = 54/78 (69%), Positives = 66/78 (84%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELWI+PT +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRR+++ + Q REFHGMSS
Sbjct: 155 ELWIIPTYENSAWSIMAISFISLLAMSAVLATCFFVRRHQIRRDRARIPQAREFHGMSSQ 214
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT V EDNC
Sbjct: 215 LVKAMPSLIFTKVQEDNC 232
>ref|XP_006830423.1| hypothetical protein AMTR_s00118p00107060 [Amborella trichopoda]
gi|548836757|gb|ERM97839.1| hypothetical protein
AMTR_s00118p00107060 [Amborella trichopoda]
Length = 446
Score = 112 bits (281), Expect = 4e-23
Identities = 53/78 (67%), Positives = 65/78 (83%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELWI+P +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE+ +REFHGMSS
Sbjct: 162 ELWIIPNFENSAWSIMAISFISLLALSAVLATCFFVRRHRIRRERPQTPHVREFHGMSSR 221
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKA+PSL FTSV+EDNC
Sbjct: 222 LVKALPSLIFTSVLEDNC 239
>ref|XP_004496378.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like isoform X1 [Cicer
arietinum] gi|502118720|ref|XP_004496379.1| PREDICTED:
E3 ubiquitin-protein ligase RNF13-like isoform X2 [Cicer
arietinum]
Length = 442
Score = 112 bits (281), Expect = 4e-23
Identities = 53/78 (67%), Positives = 65/78 (83%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E W++PT +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE+ S +REFHGMSS
Sbjct: 152 ETWLIPTFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRASHVREFHGMSSR 211
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FTS +EDNC
Sbjct: 212 LVKAMPSLIFTSALEDNC 229
>gb|EOY17226.1| Protease-associated RING/U-box zinc finger family protein
[Theobroma cacao]
Length = 487
Score = 112 bits (280), Expect = 5e-23
Identities = 52/78 (66%), Positives = 67/78 (85%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELW++P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE+ S++REFHGMS
Sbjct: 195 ELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPQSSRVREFHGMSRR 254
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT+V+EDNC
Sbjct: 255 LVKAMPSLVFTAVLEDNC 272
>tpg|DAA47491.1| TPA: putative protease-associated RING zinc finger domain family
protein [Zea mays]
Length = 266
Score = 112 bits (280), Expect = 5e-23
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+WILPT DNSAW+I+AISF+SLLA+SAV A CF +RR+ IRR+ + + REFHGMSS
Sbjct: 149 EVWILPTFDNSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRDHPRIPEAREFHGMSSQ 208
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT V EDNC
Sbjct: 209 LVKAMPSLIFTKVQEDNC 226
>gb|ACN25743.1| unknown [Zea mays] gi|414868935|tpg|DAA47492.1| TPA: putative
protease-associated RING zinc finger domain family
protein [Zea mays]
Length = 385
Score = 112 bits (280), Expect = 5e-23
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+WILPT DNSAW+I+AISF+SLLA+SAV A CF +RR+ IRR+ + + REFHGMSS
Sbjct: 33 EVWILPTFDNSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRDHPRIPEAREFHGMSSQ 92
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT V EDNC
Sbjct: 93 LVKAMPSLIFTKVQEDNC 110
>ref|NP_001147957.1| RING finger protein 13 precursor [Zea mays]
gi|194705778|gb|ACF86973.1| unknown [Zea mays]
gi|195614812|gb|ACG29236.1| RING finger protein 13 [Zea
mays] gi|223942859|gb|ACN25513.1| unknown [Zea mays]
gi|223949133|gb|ACN28650.1| unknown [Zea mays]
gi|414868931|tpg|DAA47488.1| TPA: putative
protease-associated RING zinc finger domain family
protein isoform 1 [Zea mays]
gi|414868932|tpg|DAA47489.1| TPA: putative
protease-associated RING zinc finger domain family
protein isoform 2 [Zea mays]
gi|414868933|tpg|DAA47490.1| TPA: putative
protease-associated RING zinc finger domain family
protein isoform 3 [Zea mays]
Length = 501
Score = 112 bits (280), Expect = 5e-23
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+WILPT DNSAW+I+AISF+SLLA+SAV A CF +RR+ IRR+ + + REFHGMSS
Sbjct: 149 EVWILPTFDNSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRDHPRIPEAREFHGMSSQ 208
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT V EDNC
Sbjct: 209 LVKAMPSLIFTKVQEDNC 226
>ref|XP_002533876.1| zinc finger protein, putative [Ricinus communis]
gi|223526177|gb|EEF28507.1| zinc finger protein,
putative [Ricinus communis]
Length = 434
Score = 112 bits (279), Expect = 7e-23
Identities = 53/78 (67%), Positives = 67/78 (85%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
ELW++P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRR + S++REFHGMSS
Sbjct: 155 ELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSSRVREFHGMSSR 214
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT+VVEDNC
Sbjct: 215 LVKAMPSLIFTAVVEDNC 232
>ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Glycine max]
Length = 469
Score = 111 bits (278), Expect = 9e-23
Identities = 52/78 (66%), Positives = 66/78 (84%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+W++PT +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE+ +REFHGMSS
Sbjct: 151 EIWLIPTFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRAPLVREFHGMSSR 210
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT+V+EDNC
Sbjct: 211 LVKAMPSLIFTAVLEDNC 228
>gb|EXB57740.1| E3 ubiquitin-protein ligase [Morus notabilis]
Length = 445
Score = 111 bits (277), Expect = 1e-22
Identities = 51/78 (65%), Positives = 67/78 (85%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+W++P+ +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE+ S +REFHGMSS
Sbjct: 151 EVWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRASHVREFHGMSSR 210
Query: 182 LVKAMPSLEFTSVVEDNC 235
LV+AMPSL FT+V+EDNC
Sbjct: 211 LVRAMPSLIFTAVLEDNC 228
>gb|ESW15632.1| hypothetical protein PHAVU_007G088600g [Phaseolus vulgaris]
Length = 439
Score = 111 bits (277), Expect = 1e-22
Identities = 53/78 (67%), Positives = 67/78 (85%)
Frame = +2
Query: 2 ELWILPTIDNSAWAIVAISFMSLLAISAVFAMCFLLRRNIIRREQSPLSQIREFHGMSSH 181
E+W++PT +NSAW+I+AISF+SLLA+SAV A CF +RR+ IRRE+ P +REFHGMSS
Sbjct: 151 EIWLIPTFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRER-PRGSLREFHGMSSR 209
Query: 182 LVKAMPSLEFTSVVEDNC 235
LVKAMPSL FT+V+EDNC
Sbjct: 210 LVKAMPSLIFTAVLEDNC 227