BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00030662
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323264.2| dyskerin family protein [Populus trichocarpa...   100   2e-19
ref|XP_006421248.1| hypothetical protein CICLE_v10004588mg [Citr...   100   2e-19
ref|XP_002308911.1| dyskerin family protein [Populus trichocarpa...    99   8e-19
ref|XP_006844729.1| hypothetical protein AMTR_s00016p00253700 [A...    98   1e-18
ref|XP_006491562.1| PREDICTED: H/ACA ribonucleoprotein complex s...    97   3e-18
gb|EMJ11064.1| hypothetical protein PRUPE_ppa003802mg [Prunus pe...    95   8e-18
ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...    95   8e-18
ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex s...    95   8e-18
gb|EXC14244.1| H/ACA ribonucleoprotein complex subunit 4 [Morus ...    94   2e-17
ref|XP_006363181.1| PREDICTED: H/ACA ribonucleoprotein complex s...    94   2e-17
ref|XP_004505757.1| PREDICTED: H/ACA ribonucleoprotein complex s...    94   2e-17
emb|CBI30568.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...    94   2e-17
ref|XP_006846788.1| hypothetical protein AMTR_s00148p00049800 [A...    93   3e-17
ref|XP_004300291.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...    93   3e-17
gb|EMJ23263.1| hypothetical protein PRUPE_ppa003227mg [Prunus pe...    93   3e-17
ref|NP_191274.1| putative pseudouridine synthase NAP57 [Arabidop...    93   3e-17
gb|EOY09080.1| NAP57 isoform 2 [Theobroma cacao]                       93   4e-17
gb|EOY09079.1| NAP57 isoform 1 [Theobroma cacao]                       93   4e-17
ref|XP_004232632.1| PREDICTED: H/ACA ribonucleoprotein complex s...    92   6e-17

>ref|XP_002323264.2| dyskerin family protein [Populus trichocarpa]
           gi|550320783|gb|EEF05025.2| dyskerin family protein
           [Populus trichocarpa]
          Length = 500

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -1

Query: 155 DQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           D VKDF IKPQ+FTP++DTS WPILLKNYDRLNVRTGHYTPLP GHSPLKR
Sbjct: 29  DTVKDFMIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPCGHSPLKR 79


>ref|XP_006421248.1| hypothetical protein CICLE_v10004588mg [Citrus clementina]
           gi|557523121|gb|ESR34488.1| hypothetical protein
           CICLE_v10004588mg [Citrus clementina]
          Length = 600

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/77 (62%), Positives = 53/77 (68%)
 Frame = -1

Query: 233 SSDNATPSANDGHLYLAPSAVVSSEGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNV 54
           SS  +  + ND       +A         KDF IKPQSFTPS+DTS WPILLKNYDRLNV
Sbjct: 18  SSSASANAKNDAAALTTDTADADDNNATAKDFIIKPQSFTPSIDTSQWPILLKNYDRLNV 77

Query: 53  RTGHYTPLPAGHSPLKR 3
           RTGHYTPLP G+SPLKR
Sbjct: 78  RTGHYTPLPNGYSPLKR 94


>ref|XP_002308911.1| dyskerin family protein [Populus trichocarpa]
           gi|222854887|gb|EEE92434.1| dyskerin family protein
           [Populus trichocarpa]
          Length = 593

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -1

Query: 155 DQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           D  KDF IKPQ+FTP++DTS WPILLKNYDRLNVRTGHYTPLP+GHSPLKR
Sbjct: 30  DTDKDFMIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKR 80


>ref|XP_006844729.1| hypothetical protein AMTR_s00016p00253700 [Amborella trichopoda]
           gi|548847200|gb|ERN06404.1| hypothetical protein
           AMTR_s00016p00253700 [Amborella trichopoda]
          Length = 627

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 45/57 (78%), Positives = 49/57 (85%)
 Frame = -1

Query: 173 VVSSEGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           VVS E    KD+ IKPQSFTPS+DTS WPILLKNYDRLNVRTGHYTP+P+G SPLKR
Sbjct: 43  VVSGEEQADKDYLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPIPSGFSPLKR 99


>ref|XP_006491562.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Citrus
           sinensis]
          Length = 602

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -1

Query: 146 KDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           KDF IKPQSFTPS+DTS WPILLKNYDRLNVRTGHYTPLP G+SPLKR
Sbjct: 47  KDFIIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPNGYSPLKR 94


>gb|EMJ11064.1| hypothetical protein PRUPE_ppa003802mg [Prunus persica]
          Length = 548

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = -1

Query: 167 SSEGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           + + D  KDF IKPQS TPS+DTS WPILLKNYDRLNVRTGHYTPLP+G+SPLKR
Sbjct: 29  AKDDDLDKDFMIKPQSSTPSMDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKR 83


>ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
           subunit 4-like [Cucumis sativus]
          Length = 566

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 47/61 (77%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
 Frame = -1

Query: 179 SAVVSSEGD--QVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLK 6
           SAV S E    +V DF IKPQSFTP VDTS WPILLKNYDRLNVRTGHYTPLP+G+ PLK
Sbjct: 9   SAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLK 68

Query: 5   R 3
           R
Sbjct: 69  R 69


>ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
           [Cucumis sativus]
          Length = 564

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 47/61 (77%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
 Frame = -1

Query: 179 SAVVSSEGD--QVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLK 6
           SAV S E    +V DF IKPQSFTP VDTS WPILLKNYDRLNVRTGHYTPLP+G+ PLK
Sbjct: 9   SAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLK 68

Query: 5   R 3
           R
Sbjct: 69  R 69


>gb|EXC14244.1| H/ACA ribonucleoprotein complex subunit 4 [Morus notabilis]
          Length = 605

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/66 (69%), Positives = 51/66 (77%)
 Frame = -1

Query: 200 GHLYLAPSAVVSSEGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAG 21
           G L   P+   SSE      F IKPQSFTP++DTS WPILLKNYDRLNVRTGHYTPLP+G
Sbjct: 24  GELESEPTQKESSE------FMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPLPSG 77

Query: 20  HSPLKR 3
           +SPLKR
Sbjct: 78  YSPLKR 83


>ref|XP_006363181.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Solanum
           tuberosum]
          Length = 573

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -1

Query: 143 DFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           DF IKPQS+TP++DTS WPILLKNYDRLNVRTGHYTPLP+G+SPLKR
Sbjct: 35  DFLIKPQSYTPTIDTSEWPILLKNYDRLNVRTGHYTPLPSGYSPLKR 81


>ref|XP_004505757.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cicer
           arietinum]
          Length = 580

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/48 (83%), Positives = 45/48 (93%)
 Frame = -1

Query: 146 KDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           ++F IKPQ  TPS+DTS+WPILLKNYDRLNVRTGHYTPLP+GHSPLKR
Sbjct: 37  EEFMIKPQQVTPSIDTSSWPILLKNYDRLNVRTGHYTPLPSGHSPLKR 84


>emb|CBI30568.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -1

Query: 143 DFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           +F IKPQSFTPS+DTS WPILLKNYDRLNVRTGHYTPLP+G+SPLKR
Sbjct: 38  EFLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKR 84


>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
           vinifera]
          Length = 586

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -1

Query: 143 DFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           +F IKPQSFTPS+DTS WPILLKNYDRLNVRTGHYTPLP+G+SPLKR
Sbjct: 38  EFLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKR 84


>ref|XP_006846788.1| hypothetical protein AMTR_s00148p00049800 [Amborella trichopoda]
           gi|548849610|gb|ERN08369.1| hypothetical protein
           AMTR_s00148p00049800 [Amborella trichopoda]
          Length = 195

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/57 (73%), Positives = 47/57 (82%)
 Frame = -1

Query: 173 VVSSEGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           VVS E     D+ IKPQ+FTPS+DTS WPILLKNYDRLN RTGHYTP+P+G SPLKR
Sbjct: 5   VVSGEEQADNDYLIKPQTFTPSLDTSHWPILLKNYDRLNARTGHYTPIPSGFSPLKR 61


>ref|XP_004300291.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
           subunit 4-like [Fragaria vesca subsp. vesca]
          Length = 568

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = -1

Query: 161 EGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           + D  KD+ IKPQS TPS+DTS WPILLKNYDRLNVRTGHYTPLP+G SPLKR
Sbjct: 29  DNDADKDYMIKPQSTTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGFSPLKR 81


>gb|EMJ23263.1| hypothetical protein PRUPE_ppa003227mg [Prunus persica]
          Length = 591

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = -1

Query: 161 EGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           + D  K+F IKPQS TPS+DTS WPILLKNYDRLNVRTGHYTPLP+G+SPLKR
Sbjct: 33  DNDLDKNFMIKPQSSTPSMDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKR 85


>ref|NP_191274.1| putative pseudouridine synthase NAP57 [Arabidopsis thaliana]
           gi|67460428|sp|Q9LD90.1|CBF5_ARATH RecName: Full=H/ACA
           ribonucleoprotein complex subunit 4; AltName: Full=CBF5
           homolog; AltName: Full=Dyskerin; AltName:
           Full=Nopp-140-associated protein of 57 kDa homolog;
           Short=AtNAP57; AltName: Full=Nucleolar protein NAP57
           homolog gi|8901186|gb|AAF43210.2|AF234984_1 putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|6911885|emb|CAB72185.1| putative protein [Arabidopsis
           thaliana] gi|28392852|gb|AAO41863.1| unknown protein
           [Arabidopsis thaliana] gi|225898727|dbj|BAH30494.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332646100|gb|AEE79621.1| putative pseudouridine
           synthase NAP57 [Arabidopsis thaliana]
          Length = 565

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -1

Query: 143 DFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           D+ IKPQSFTP++DTS WPILLKNYDRLNVRTGHYTP+ AGHSPLKR
Sbjct: 26  DYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHSPLKR 72


>gb|EOY09080.1| NAP57 isoform 2 [Theobroma cacao]
          Length = 583

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/55 (80%), Positives = 46/55 (83%)
 Frame = -1

Query: 167 SSEGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           + E DQ  DF IKPQS TPS+DTS WPILLKNYDRLNVRTGHYTPLP G SPLKR
Sbjct: 24  TKESDQ--DFMIKPQSTTPSIDTSQWPILLKNYDRLNVRTGHYTPLPCGFSPLKR 76


>gb|EOY09079.1| NAP57 isoform 1 [Theobroma cacao]
          Length = 614

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/55 (80%), Positives = 46/55 (83%)
 Frame = -1

Query: 167 SSEGDQVKDFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           + E DQ  DF IKPQS TPS+DTS WPILLKNYDRLNVRTGHYTPLP G SPLKR
Sbjct: 24  TKESDQ--DFMIKPQSTTPSIDTSQWPILLKNYDRLNVRTGHYTPLPCGFSPLKR 76


>ref|XP_004232632.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Solanum
           lycopersicum]
          Length = 587

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -1

Query: 143 DFFIKPQSFTPSVDTSAWPILLKNYDRLNVRTGHYTPLPAGHSPLKR 3
           DF IKPQS+TP++DTS WPILLKNYDRLNVRTGHYTPLP+G SPLKR
Sbjct: 35  DFLIKPQSYTPTIDTSEWPILLKNYDRLNVRTGHYTPLPSGFSPLKR 81