BLASTX nr result

ID: Zingiber23_contig00030622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00030622
         (207 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA52992.1| TPA: hypothetical protein ZEAMMB73_513383 [Zea m...    57   3e-06
ref|XP_004146819.1| PREDICTED: zinc finger protein MAGPIE-like [...    55   7e-06

>tpg|DAA52992.1| TPA: hypothetical protein ZEAMMB73_513383 [Zea mays]
          Length = 497

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/57 (54%), Positives = 35/57 (61%)
 Frame = +3

Query: 36  HQYPLKHQALEENMSNLTSPSGEACSVSSNQHYSSLASSTIPNSTKKKRSLPGNPDP 206
           HQ  L   A +ENMSNLTS SG+  SVSS+          +P   KKKRSLPGNPDP
Sbjct: 14  HQQQLAAAAADENMSNLTSASGDQASVSSHP---------VPPPAKKKRSLPGNPDP 61


>ref|XP_004146819.1| PREDICTED: zinc finger protein MAGPIE-like [Cucumis sativus]
          Length = 527

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
 Frame = +3

Query: 57  QALEENMSNLTSPSGEACSVSSNQ------HYSSLASSTIPNSTKKKRSLPGNPDP 206
           QA+EEN+SNLTS SGEA + S N       +YS    ST P   KKKR+LPGNPDP
Sbjct: 12  QAMEENLSNLTSASGEASACSGNHSDQIPTNYSGQFFST-PPPPKKKRNLPGNPDP 66


Top