BLASTX nr result

ID: Zingiber23_contig00029993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00029993
         (289 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324258.2| hypothetical protein POPTR_0018s00980g [Popu...    58   1e-06
ref|XP_002308629.2| hypothetical protein POPTR_0006s26160g [Popu...    56   6e-06
ref|XP_002284674.1| PREDICTED: uncharacterized protein LOC100247...    55   1e-05

>ref|XP_002324258.2| hypothetical protein POPTR_0018s00980g [Populus trichocarpa]
           gi|550317758|gb|EEF02823.2| hypothetical protein
           POPTR_0018s00980g [Populus trichocarpa]
          Length = 415

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
 Frame = -3

Query: 233 MLRAMNK-VRKDQSTGQLXXXXXXXXXXXS--NGLIQKARNTSLFSVPGLFMNANSKGLS 63
           MLR   + ++KDQ TGQL              N +    +  S F+VPGLF+  + KGLS
Sbjct: 1   MLRKRTRSLKKDQQTGQLTMSDSGSESYFQPDNNMGHSHKANSFFTVPGLFVGLSHKGLS 60

Query: 62  DCESGTSPTSPLD---FKNCSNP 3
           DC+S  SPTSPLD   F N  NP
Sbjct: 61  DCDSVRSPTSPLDSRMFSNIGNP 83


>ref|XP_002308629.2| hypothetical protein POPTR_0006s26160g [Populus trichocarpa]
           gi|550337113|gb|EEE92152.2| hypothetical protein
           POPTR_0006s26160g [Populus trichocarpa]
          Length = 411

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -3

Query: 233 MLRAMNK-VRKDQSTGQLXXXXXXXXXXXSN-GLIQKARNTSLFSVPGLFMNANSKGLSD 60
           MLR   + ++KDQ  GQL            +  +    +  S F+VPGLF+ ++ KGLSD
Sbjct: 1   MLRKRTRSLQKDQQMGQLTMSDSGSESHFQSDNMGHNHKANSFFTVPGLFVGSSLKGLSD 60

Query: 59  CESGTSPTSPLDFKNCSN 6
           C+S  SPTSPLDF+  SN
Sbjct: 61  CDSVRSPTSPLDFRMFSN 78


>ref|XP_002284674.1| PREDICTED: uncharacterized protein LOC100247517 [Vitis vinifera]
          Length = 411

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = -3

Query: 134 QKARNTSLFSVPGLFMNANSKGLSDCESGTSPTSPLDFKNCSN 6
           QK +  S FSVPGLF+  N KGLSD +S  SPTSPLDF+  SN
Sbjct: 36  QKHKGNSFFSVPGLFVGLNYKGLSDSDSVRSPTSPLDFRVFSN 78


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