BLASTX nr result
ID: Zingiber23_contig00029893
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00029893
(400 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC72046.1| hypothetical protein OsI_04952 [Oryza sativa Indi... 78 1e-12
ref|NP_001045211.1| Os01g0919500 [Oryza sativa Japonica Group] g... 78 1e-12
ref|XP_006645237.1| PREDICTED: uncharacterized protein LOC102704... 78 1e-12
ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase compl... 76 4e-12
dbj|BAJ86661.1| predicted protein [Hordeum vulgare subsp. vulgar... 76 4e-12
gb|EMT32958.1| RING finger protein 4 [Aegilops tauschii] 75 7e-12
gb|EMS67995.1| E3 ubiquitin ligase RNF4 [Triticum urartu] 75 7e-12
ref|XP_003564936.1| PREDICTED: uncharacterized protein LOC100845... 75 7e-12
dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgar... 75 7e-12
gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN400... 75 7e-12
gb|EMT26068.1| E3 ubiquitin-protein ligase BRE1A [Aegilops tausc... 75 1e-11
gb|EMS66011.1| E3 ubiquitin-protein ligase BRE1A [Triticum urartu] 75 1e-11
gb|AEE81066.1| ubiquitin-protein ligase/zinc ion binding protein... 75 1e-11
gb|EMT00846.1| Putative histone acetyltransferase HAC-like prote... 74 2e-11
ref|XP_002456842.1| hypothetical protein SORBIDRAFT_03g043910 [S... 74 2e-11
ref|XP_004971067.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 74 3e-11
gb|EMT00795.1| Putative histone acetyltransferase HAC-like prote... 74 3e-11
gb|EMS61457.1| putative histone acetyltransferase HAC-like 1 [Tr... 74 3e-11
dbj|BAD08744.1| unknown protein [Oryza sativa Japonica Group] gi... 74 3e-11
gb|EAZ43407.1| hypothetical protein OsJ_28012 [Oryza sativa Japo... 74 3e-11
>gb|EEC72046.1| hypothetical protein OsI_04952 [Oryza sativa Indica Group]
Length = 241
Score = 78.2 bits (191), Expect = 1e-12
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P+ C +CM+ L E ++T CGHI+C C++ IQ K+CPTC RKL ++NFHR+Y P+ E
Sbjct: 182 PTFNCPVCMNELVEPSSTICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYLPSAE 241
>ref|NP_001045211.1| Os01g0919500 [Oryza sativa Japonica Group]
gi|57899845|dbj|BAD87629.1| unknown protein [Oryza
sativa Japonica Group] gi|113534742|dbj|BAF07125.1|
Os01g0919500 [Oryza sativa Japonica Group]
gi|215740758|dbj|BAG97414.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765198|dbj|BAG86895.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222619766|gb|EEE55898.1| hypothetical protein
OsJ_04562 [Oryza sativa Japonica Group]
Length = 241
Score = 78.2 bits (191), Expect = 1e-12
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P+ C +CM+ L E ++T CGHI+C C++ IQ K+CPTC RKL ++NFHR+Y P+ E
Sbjct: 182 PTFNCPVCMNELVEPSSTICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYLPSAE 241
>ref|XP_006645237.1| PREDICTED: uncharacterized protein LOC102704572 [Oryza brachyantha]
Length = 240
Score = 77.8 bits (190), Expect = 1e-12
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P C +CM+ L EA +T CGHI+C C++ IQ K+CPTC RKL ++NFHR+Y P E
Sbjct: 181 PKFNCPVCMNELVEATSTICGHIFCKLCIKASIQAQKKCPTCRRKLTMNNFHRVYLPLAE 240
>ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase complex slx8-rfp subunit
slx8-like [Brachypodium distachyon]
Length = 197
Score = 76.3 bits (186), Expect = 4e-12
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
P TC +C + L E +TT CGHI+C SC+++ IQ K+CPTC + L ++NFHR+Y P
Sbjct: 135 PIFTCPVCWNKLEEPSTTICGHIFCTSCIKQSIQVQKKCPTCRKSLRMNNFHRIYLP 191
>dbj|BAJ86661.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507932|dbj|BAJ86709.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326508880|dbj|BAJ86833.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 260
Score = 76.3 bits (186), Expect = 4e-12
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -1
Query: 391 TCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
+C +CM+ L A++T CGHI+C C++ IQ K+CPTC RKL ISNFHR+Y P
Sbjct: 203 SCPVCMNELVNASSTICGHIFCQKCIKASIQAQKKCPTCRRKLTISNFHRVYLP 256
>gb|EMT32958.1| RING finger protein 4 [Aegilops tauschii]
Length = 260
Score = 75.5 bits (184), Expect = 7e-12
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -1
Query: 391 TCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
+C +CM+ L A++T CGHI+C C++ IQ K+CPTC RKL +SNFHR+Y P +
Sbjct: 203 SCPVCMNELVNASSTICGHIFCQKCIKASIQAQKKCPTCRRKLTMSNFHRVYLPTAD 259
>gb|EMS67995.1| E3 ubiquitin ligase RNF4 [Triticum urartu]
Length = 260
Score = 75.5 bits (184), Expect = 7e-12
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -1
Query: 391 TCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
+C +CM+ L A++T CGHI+C C++ IQ K+CPTC RKL +SNFHR+Y P +
Sbjct: 203 SCPVCMNELVNASSTICGHIFCQKCIKASIQAQKKCPTCRRKLTMSNFHRVYLPTAD 259
>ref|XP_003564936.1| PREDICTED: uncharacterized protein LOC100845167 [Brachypodium
distachyon]
Length = 254
Score = 75.5 bits (184), Expect = 7e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P +C +CM+ L + ++T CGHI+C C++ IQT K+CPTC +KL ++N+HR+Y P +
Sbjct: 194 PKFSCPVCMNELVDPSSTICGHIFCQKCIKLSIQTQKKCPTCRKKLTVNNYHRVYLPTTD 253
>dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525537|dbj|BAJ88815.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326532854|dbj|BAJ89272.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 75.5 bits (184), Expect = 7e-12
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
P TC +C + L E ATT CGHI+C +C+++ IQ K+CPTC + L ++NFHR+Y P
Sbjct: 150 PIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYLP 206
>gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN40051.1| unknown
[Picea sitchensis] gi|224285742|gb|ACN40586.1| unknown
[Picea sitchensis]
Length = 231
Score = 75.5 bits (184), Expect = 7e-12
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -1
Query: 394 LTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
LTC++CMD + E +T CGHI+C SC+ IQ K+CPTC RKL+++N HR++ P
Sbjct: 173 LTCAICMDSMKEETSTICGHIFCRSCIMSAIQFQKKCPTCRRKLSMANIHRIFLP 227
>gb|EMT26068.1| E3 ubiquitin-protein ligase BRE1A [Aegilops tauschii]
Length = 257
Score = 74.7 bits (182), Expect = 1e-11
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
P+ TC +C++ L E +TT CGHI+C C+++ IQ K+CPTC + L +NFHR+Y P
Sbjct: 197 PNFTCPVCLNKLVEPSTTKCGHIFCAECIKQAIQFQKKCPTCRKALRKNNFHRIYLP 253
>gb|EMS66011.1| E3 ubiquitin-protein ligase BRE1A [Triticum urartu]
Length = 316
Score = 74.7 bits (182), Expect = 1e-11
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
P+ TC +C++ L E +TT CGHI+C C+++ IQ K+CPTC + L +NFHR+Y P
Sbjct: 192 PNFTCPVCLNKLVEPSTTKCGHIFCAECIKQAIQFQKKCPTCRKALRRNNFHRIYLP 248
>gb|AEE81066.1| ubiquitin-protein ligase/zinc ion binding protein [Triticum
aestivum]
Length = 252
Score = 74.7 bits (182), Expect = 1e-11
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
P+ TC +C++ L E +TT CGHI+C C+++ IQ K+CPTC + L +NFHR+Y P
Sbjct: 192 PNFTCPVCLNKLVEPSTTKCGHIFCAECIKQAIQFQKKCPTCRKALRKNNFHRIYLP 248
>gb|EMT00846.1| Putative histone acetyltransferase HAC-like protein 1 [Aegilops
tauschii]
Length = 208
Score = 73.9 bits (180), Expect = 2e-11
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P +C +CM+ L +A++T CGHI+C C+ IQ +CPTC R L +++FHR+Y P M+
Sbjct: 149 PKFSCPVCMNELVDASSTICGHIFCQKCIEASIQAQSKCPTCCRMLTVNSFHRIYLPTMD 208
>ref|XP_002456842.1| hypothetical protein SORBIDRAFT_03g043910 [Sorghum bicolor]
gi|241928817|gb|EES01962.1| hypothetical protein
SORBIDRAFT_03g043910 [Sorghum bicolor]
Length = 242
Score = 73.9 bits (180), Expect = 2e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P +C +CM+ L EAA+T CGHI+C C++ IQ K+CPTC R+L S HR+Y P E
Sbjct: 183 PKFSCPICMNELTEAASTVCGHIFCQKCIKAAIQAQKKCPTCRRRLTPSQQHRVYLPLTE 242
>ref|XP_004971067.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Setaria italica]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P TC +CM+ L EAA+T CGHI+C C++ IQ K+CPTC R L + HR+Y P E
Sbjct: 182 PKFTCPICMNELTEAASTVCGHIFCQKCIKAAIQAQKKCPTCRRTLNKNQHHRVYLPTTE 241
>gb|EMT00795.1| Putative histone acetyltransferase HAC-like protein 1 [Aegilops
tauschii]
Length = 327
Score = 73.6 bits (179), Expect = 3e-11
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P +C +CM+ L +A++T CGHI+C C++ IQ +CPTC R L +++FHR+Y P M+
Sbjct: 268 PKFSCPVCMNELVDASSTICGHIFCQKCIQASIQAQSKCPTCRRTLTMNSFHRVYLPTMD 327
>gb|EMS61457.1| putative histone acetyltransferase HAC-like 1 [Triticum urartu]
Length = 289
Score = 73.6 bits (179), Expect = 3e-11
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFPAME 221
P +C +CM+ L +A++T CGHI+C C++ IQ +CPTC R L +++FHR+Y P M+
Sbjct: 230 PKFSCPVCMNELVDASSTICGHIFCQKCIQASIQAQSKCPTCRRTLTMNSFHRVYLPTMD 289
>dbj|BAD08744.1| unknown protein [Oryza sativa Japonica Group]
gi|42761408|dbj|BAD11573.1| unknown protein [Oryza
sativa Japonica Group]
Length = 449
Score = 73.6 bits (179), Expect = 3e-11
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
P+ TC +C++ L + +TT+CGHI+C C++ +++ K+CPTC + L I +FHR+Y P
Sbjct: 387 PTFTCPVCLNKLDKPSTTNCGHIFCEKCIQAWLKAQKKCPTCRKSLGIKSFHRVYLP 443
>gb|EAZ43407.1| hypothetical protein OsJ_28012 [Oryza sativa Japonica Group]
Length = 314
Score = 73.6 bits (179), Expect = 3e-11
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = -1
Query: 400 PSLTCSMCMDPLGEAATTDCGHIYCYSCLREFIQTHKECPTCGRKLAISNFHRLYFP 230
P+ TC +C++ L + +TT+CGHI+C C++ +++ K+CPTC + L I +FHR+Y P
Sbjct: 252 PTFTCPVCLNKLDKPSTTNCGHIFCEKCIQAWLKAQKKCPTCRKSLGIKSFHRVYLP 308