BLASTX nr result
ID: Zingiber23_contig00029720
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00029720
(1331 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508... 452 e-124
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 448 e-123
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 446 e-122
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 442 e-121
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 440 e-121
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 439 e-120
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 436 e-120
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,... 436 e-119
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,... 436 e-119
ref|XP_002333134.1| predicted protein [Populus trichocarpa] 436 e-119
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila] 435 e-119
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 435 e-119
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 435 e-119
ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,... 435 e-119
ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,... 433 e-119
ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas... 432 e-118
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 430 e-118
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 429 e-117
ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, part... 429 e-117
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci... 427 e-117
>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 452 bits (1162), Expect = e-124
Identities = 248/432 (57%), Positives = 292/432 (67%), Gaps = 29/432 (6%)
Frame = +2
Query: 17 CTRDPGYDEVAAALENIYKLSP--------------------------EDFTDWEXXXXX 118
CT + Y+E AA LENIYKLSP D
Sbjct: 88 CTLEVDYNEAAAKLENIYKLSPATRSSDVEEVEGKIKGRRQRRKRSKESDEKGVNSNDQI 147
Query: 119 XXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEK---LVREYSIST 289
L L+ R++L++ R+E+ V S R+++ + + EK LVR+YS ST
Sbjct: 148 VVRNQTNRIKRLSLDNRIALKKNREEKPVV----SVRRKKSSENESEKIDRLVRDYSAST 203
Query: 290 DLNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNT 469
DL LDW+++KIPPVL S+EHTWLFK MQPMKA+LQ KE L KDL R+ T ELA+A N
Sbjct: 204 DLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPTEDELAEATNM 263
Query: 470 SVPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAID 649
S +R+HLEVGQAARNKLIKHNLRLVLF INKYF + A G +FQ+ CQAG +GLITAID
Sbjct: 264 SAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQAGVKGLITAID 323
Query: 650 RFEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQP 829
RFEPRR FRLSTY LFWIRH+I RSMTL+SFT+V FG+ESVR EIQ+ KLEL FEL R+P
Sbjct: 324 RFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLELLFELHREP 383
Query: 830 TEKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPA 1009
TE+E +V IS ERY +V++ S+PV SLH++H VTQEEFINGITDIDG VGGD RQPA
Sbjct: 384 TEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQEEFINGITDIDG-VGGDHRRQPA 442
Query: 1010 XXXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXX 1189
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 443 LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 502
Query: 1190 XXPTRVDYLRRY 1225
P RVDYLRRY
Sbjct: 503 KHPARVDYLRRY 514
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 520
Score = 448 bits (1153), Expect = e-123
Identities = 243/434 (55%), Positives = 291/434 (67%), Gaps = 28/434 (6%)
Frame = +2
Query: 8 ADACTRDPGYDEVAAALENIYKLSPE----------------------------DFTDWE 103
A C + Y+E AA LEN+YK SPE D +
Sbjct: 86 APTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRKKISEVDDKVEKR 145
Query: 104 XXXXXXXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSI 283
L L++RV+L+ + E+ + + +R E E+LVREYS
Sbjct: 146 TSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEMMEELVREYSA 205
Query: 284 STDLNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAV 463
STDL LDWK+++IPPVLSS EHTWLFK MQPMK +L+VKE L KDL RE GELA+A
Sbjct: 206 STDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPNKGELAEAT 265
Query: 464 NTSVPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITA 643
N +V ++RHLEVG+AARNKLIKHNLRLVLFVINKYF + A G KFQ+ CQAG +GLITA
Sbjct: 266 NMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITA 325
Query: 644 IDRFEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGR 823
IDRFEP+R FRLSTYGLFWIRH+I RSMTL+SFT+V FG+ESVR EIQK KLE+ +L R
Sbjct: 326 IDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKR 385
Query: 824 QPTEKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQ 1003
PTE E ++V IS ERY++V++ S+PVFSL+++H VTQEEFINGITD+DG V GD R+
Sbjct: 386 MPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDG-VDGDNRRK 444
Query: 1004 PAXXXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXX 1183
PA KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 445 PALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALM 504
Query: 1184 XXXXPTRVDYLRRY 1225
P RVDYLRRY
Sbjct: 505 KLKHPARVDYLRRY 518
>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 446 bits (1146), Expect = e-122
Identities = 241/434 (55%), Positives = 288/434 (66%), Gaps = 28/434 (6%)
Frame = +2
Query: 8 ADACTRDPGYDEVAAALENIYKLSPEDFT----------------------------DWE 103
A CT + Y+E AA LEN+YK SPE D
Sbjct: 85 ASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDADKDEN 144
Query: 104 XXXXXXXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSI 283
L L +RV+L+ + E+ + R++ E E+LVREYS
Sbjct: 145 RTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYST 204
Query: 284 STDLNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAV 463
STDL LDWK++KIPPVL+S EH WLFK MQPMK +L+VKE L KDL RE T GELA+A
Sbjct: 205 STDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEAT 264
Query: 464 NTSVPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITA 643
N SV +++HLEVG+AAR+KLIKHNLRLVLFV+NKYF + A G KFQ+ CQAG +GLITA
Sbjct: 265 NMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITA 324
Query: 644 IDRFEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGR 823
IDRFEP+R FRLSTYGLFWIRH+I RSMTL+SFT+V FG+ESVR EIQK KL + F L R
Sbjct: 325 IDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKR 384
Query: 824 QPTEKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQ 1003
PTE E ++V IS ERY++V++ S+PVFSLH++H TQEEFINGITD+DG V GD ++
Sbjct: 385 MPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDG-VEGDNRQK 443
Query: 1004 PAXXXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXX 1183
PA KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 444 PALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALM 503
Query: 1184 XXXXPTRVDYLRRY 1225
P RVDYLRRY
Sbjct: 504 KLKHPARVDYLRRY 517
>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
gi|567858878|ref|XP_006422122.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Citrus
sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Citrus
sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Citrus
sinensis] gi|557523994|gb|ESR35361.1| hypothetical
protein CICLE_v10004760mg [Citrus clementina]
gi|557523995|gb|ESR35362.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
Length = 513
Score = 442 bits (1137), Expect = e-121
Identities = 244/432 (56%), Positives = 287/432 (66%), Gaps = 26/432 (6%)
Frame = +2
Query: 8 ADACTRDPGYDEVAAALENIYKLSPEDFTDW--------------------------EXX 109
A CT D Y+E AA LENIYKLSP T +
Sbjct: 83 ASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKRIGEVEKKSDDVS 142
Query: 110 XXXXXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSIST 289
L L++R+ LR + E+E V +D E EKLVREYS ST
Sbjct: 143 GKPVVRNQVKRPKRLSLDKRIELR--KNEDEKVVTKTRKTDSKDEHEKIEKLVREYSYST 200
Query: 290 DLNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNT 469
DL LDWK++KIPPVLSS EHTWLFK MQPMK +QVKE+L KDL RE T ELA+A N
Sbjct: 201 DLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTDVELAEATNM 260
Query: 470 SVPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAID 649
S +++ LEVG+AARNKLIKHNLRLVLFVI KYF + A G +FQ+ CQAG +GLITAID
Sbjct: 261 SAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAGVKGLITAID 320
Query: 650 RFEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQP 829
RFEP+R FRLSTYGLFWIRH+I RSMT++SFT+VPFG+ESVR EIQ+ KLEL FEL R P
Sbjct: 321 RFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLELLFELKRVP 380
Query: 830 TEKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPA 1009
T++E V IS ERY +V+K S+P+ SLH++H VTQEEFINGITD+DG V + RQPA
Sbjct: 381 TDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEFINGITDVDG-VENENQRQPA 439
Query: 1010 XXXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXX 1189
KPKESLV+RQR+GLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 440 LLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKGLMKL 499
Query: 1190 XXPTRVDYLRRY 1225
PTRVDYLR++
Sbjct: 500 KHPTRVDYLRQH 511
>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 440 bits (1132), Expect = e-121
Identities = 243/433 (56%), Positives = 289/433 (66%), Gaps = 27/433 (6%)
Frame = +2
Query: 8 ADACTRDPGYDEVAAALENIYKLSPEDFTDW-------------------------EXXX 112
A T + Y+E AA LENI+KLS D D
Sbjct: 86 ASTSTMEVDYNEAAAKLENIFKLSSADVEDAVGLTSRGRRRRSKVIGESDERAGKKSTTS 145
Query: 113 XXXXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDE--EKLVREYSIS 286
L L +RV L+ R +EE+V ++R L E+E EKLVREYS S
Sbjct: 146 DTVVRNRKKKAKRLSLHKRVELK--RDKEENVAVVLVRKRRESLNEEEKIEKLVREYSAS 203
Query: 287 TDLNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVN 466
TDL LDWK++KIPPVL S EHTWLFK MQP+K + QV E+L K L RE T ELA+A N
Sbjct: 204 TDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGREPTENELAEATN 263
Query: 467 TSVPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAI 646
SV ++RHLE G+AARNKLIKHNLRLVLFV+NKYF + G KFQ+ CQAG RGLITAI
Sbjct: 264 ISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGVRGLITAI 323
Query: 647 DRFEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQ 826
DRFEP+R FRLSTYGLFWIRH+I RSMT++SFT+V FG+ESVR EIQK K+EL+FEL R
Sbjct: 324 DRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKIELTFELKRL 383
Query: 827 PTEKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQP 1006
PTE+E ++V IS ERY++V++ S+PV SL+++H+ TQEEFIN ITD+DG V GD R+P
Sbjct: 384 PTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDG-VDGDDRRKP 442
Query: 1007 AXXXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXX 1186
A KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 443 ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMK 502
Query: 1187 XXXPTRVDYLRRY 1225
P RVDYLRRY
Sbjct: 503 LKHPARVDYLRRY 515
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 439 bits (1130), Expect = e-120
Identities = 243/432 (56%), Positives = 295/432 (68%), Gaps = 29/432 (6%)
Frame = +2
Query: 17 CTRDPGYDEVAAALENIYKLSPE-DFTDWEXXXXXXXXXXXXXXXX-------------- 151
C+ + Y+E AA LENIYKLSP D ++ E
Sbjct: 90 CSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTLADDKAEKEVSDN 149
Query: 152 -----------LGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEK---LVREYSIST 289
L LE+R++L + ++E+ S +K+RD K ++E LVREYS ST
Sbjct: 150 VVRIHNKKPKRLSLEKRIALSKMKQEKAVA----SIQKKRDSKNEDENIDVLVREYSAST 205
Query: 290 DLNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNT 469
DL LDWK++KIPPVL EH WLFK MQPMK +L+VK+ L KDL RE T GELA+A++
Sbjct: 206 DLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGELAEAMSM 265
Query: 470 SVPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAID 649
S +RRH+EVGQAARNKLIKHNLRLVLFVINKYF E A G KFQ+ CQAG +GLITAID
Sbjct: 266 SAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLITAID 325
Query: 650 RFEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQP 829
RFEP+R FRLSTYGLFWIRH+I RSMTL+SFT+V FG+ESVR EIQ+ KLEL F+L R P
Sbjct: 326 RFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELLFKLQRLP 385
Query: 830 TEKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPA 1009
TE+E ++V IS ERY++V++ S+ V SLHA+H TQEE+INGITD++G VGGD+ RQ A
Sbjct: 386 TEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEG-VGGDRGRQLA 444
Query: 1010 XXXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXX 1189
KPKESLV+RQRYGLDGKG+RTLGEIAGNL+ISREMVR
Sbjct: 445 LLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALMKL 504
Query: 1190 XXPTRVDYLRRY 1225
P RVDYLR+Y
Sbjct: 505 KHPARVDYLRQY 516
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 436 bits (1122), Expect = e-120
Identities = 243/426 (57%), Positives = 289/426 (67%), Gaps = 24/426 (5%)
Frame = +2
Query: 20 TRDPGYDEVAAALENIYKLSPE-DFTDWEXXXXXXXXXXXXXXXXLGLEE---------- 166
T + Y+E AA LENIYKLSP D +D + G E+
Sbjct: 77 TLEVDYNEAAAKLENIYKLSPATDTSDVDINGLIRKGRQRKRKTGEGDEKAENRTSRTIV 136
Query: 167 --------RVSL--RQQRKEEESVEEANSGRKRRDLKEDEEK---LVREYSISTDLNRLD 307
R+SL R K+ E E RK++D K+D EK LVR YS ST+L LD
Sbjct: 137 RNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDDNEKIEELVRTYSASTNLVSLD 196
Query: 308 WKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVPILR 487
W+++KIPPVL S EH WLFK MQPMK +L VK +L K+L R+ T GELA+A N +V +R
Sbjct: 197 WRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTDGELAEATNMNVEKVR 256
Query: 488 RHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFEPRR 667
+ LEVG+AARNKLIKHNLRLV+FV+NKYF + A G +FQ+ CQAG +GLITAIDRFEP+R
Sbjct: 257 KQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPQR 316
Query: 668 GFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEKETA 847
F+LSTY LFWIRH+I RSMTL+SFTKV FG+ESVR EIQK KLEL EL R+PTE+E
Sbjct: 317 RFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKLELLIELQRRPTEEEII 376
Query: 848 DRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXXXXX 1027
+RV IS ERY++V++ ++P SLHA+H VTQEEFINGITDID GGD RQPA
Sbjct: 377 ERVGISAERYHEVIRAAKPALSLHARHAVTQEEFINGITDID---GGDNRRQPALLRLAL 433
Query: 1028 XXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXPTRV 1207
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR P RV
Sbjct: 434 DDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARV 493
Query: 1208 DYLRRY 1225
DYLRRY
Sbjct: 494 DYLRRY 499
>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Glycine max]
Length = 488
Score = 436 bits (1121), Expect = e-119
Identities = 234/431 (54%), Positives = 295/431 (68%), Gaps = 23/431 (5%)
Frame = +2
Query: 2 VSADACTRDPGYDEVAAALENIYKLSP-------EDFTDW----------------EXXX 112
V CT D Y+E AA LENIYKLSP ED +
Sbjct: 59 VETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVSEERDDGNC 118
Query: 113 XXXXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSISTD 292
L L++R++L+ KEE +++ R ++ ++ + L+R+YS STD
Sbjct: 119 DNVVRNQNKKAKRLSLDKRIALKNNAKEEV-IDQTQKKRNVKNRVQNIDVLIRDYSASTD 177
Query: 293 LNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTS 472
L +DWK++KIPPVL S EH WLFK MQPMKA+LQ KE+L K++ +E T GELADA N S
Sbjct: 178 LVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKEITGGELADATNMS 236
Query: 473 VPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDR 652
+ +R+ +EVG+AARNKLIKHNLRLVLFVINKYF + A+G +FQ+ CQAG +GLITAIDR
Sbjct: 237 IIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDR 296
Query: 653 FEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPT 832
FEP+R +LSTY LFWIRHSI RS+TL+SFT+VPFG+E VR +IQ+ KL+L+FEL R PT
Sbjct: 297 FEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPT 356
Query: 833 EKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAX 1012
E+E +R+ ISLERY++V+K S+P+ SLH++HI TQEE+INGITD+DG V GD RQ A
Sbjct: 357 EEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDG-VNGDNRRQLAV 415
Query: 1013 XXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXX 1192
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISRE+VR
Sbjct: 416 LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALMKLK 475
Query: 1193 XPTRVDYLRRY 1225
P R+DYLRRY
Sbjct: 476 HPARLDYLRRY 486
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Glycine max]
gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Glycine max]
Length = 512
Score = 436 bits (1121), Expect = e-119
Identities = 234/431 (54%), Positives = 295/431 (68%), Gaps = 23/431 (5%)
Frame = +2
Query: 2 VSADACTRDPGYDEVAAALENIYKLSP-------EDFTDW----------------EXXX 112
V CT D Y+E AA LENIYKLSP ED +
Sbjct: 83 VETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVSEERDDGNC 142
Query: 113 XXXXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSISTD 292
L L++R++L+ KEE +++ R ++ ++ + L+R+YS STD
Sbjct: 143 DNVVRNQNKKAKRLSLDKRIALKNNAKEEV-IDQTQKKRNVKNRVQNIDVLIRDYSASTD 201
Query: 293 LNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTS 472
L +DWK++KIPPVL S EH WLFK MQPMKA+LQ KE+L K++ +E T GELADA N S
Sbjct: 202 LVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKEITGGELADATNMS 260
Query: 473 VPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDR 652
+ +R+ +EVG+AARNKLIKHNLRLVLFVINKYF + A+G +FQ+ CQAG +GLITAIDR
Sbjct: 261 IIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDR 320
Query: 653 FEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPT 832
FEP+R +LSTY LFWIRHSI RS+TL+SFT+VPFG+E VR +IQ+ KL+L+FEL R PT
Sbjct: 321 FEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPT 380
Query: 833 EKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAX 1012
E+E +R+ ISLERY++V+K S+P+ SLH++HI TQEE+INGITD+DG V GD RQ A
Sbjct: 381 EEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDG-VNGDNRRQLAV 439
Query: 1013 XXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXX 1192
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISRE+VR
Sbjct: 440 LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALMKLK 499
Query: 1193 XPTRVDYLRRY 1225
P R+DYLRRY
Sbjct: 500 HPARLDYLRRY 510
>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 436 bits (1121), Expect = e-119
Identities = 244/429 (56%), Positives = 286/429 (66%), Gaps = 26/429 (6%)
Frame = +2
Query: 17 CTRDPGYDEVAAALENIYKLSP-EDFTDWEXXXXXXXXXXXXXXXX-------------- 151
CT Y+E AA LENIYKLSP D +D E
Sbjct: 86 CTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISEGGKETEDRTGKI 145
Query: 152 -----------LGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSISTDLN 298
L LE+R+SLR + EE+ V A + R++ E + LVREYS STDL
Sbjct: 146 IVRNRAKKAKRLSLEKRISLRI-KNEEKLVSSAGKRKDRKNENEKIDDLVREYSASTDLV 204
Query: 299 RLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVP 478
LDWK++KIPPVL+S EH WLFK MQPMKA+LQVKE L ++L E T ELA A+N V
Sbjct: 205 SLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTDVELAKAINMDVL 264
Query: 479 ILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFE 658
+R+ + VG+AARNKLIKHNLRLVLFVI KYF + A G KFQ+FCQAG +GLITAIDRFE
Sbjct: 265 QVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAGVKGLITAIDRFE 324
Query: 659 PRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEK 838
P+R FRLSTYGLFWIRH+I RSMTL+SFT+V FG+ES+R EIQK KLEL F+L RQP E
Sbjct: 325 PKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLKRQPMED 384
Query: 839 ETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXX 1018
E ++VRIS ERY++V + S+PV SLH++H TQEEFI GI D+D GGD RQ A
Sbjct: 385 EIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVD---GGDDRRQSALLR 441
Query: 1019 XXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXP 1198
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR P
Sbjct: 442 LALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP 501
Query: 1199 TRVDYLRRY 1225
TRVDYLRRY
Sbjct: 502 TRVDYLRRY 510
>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
Length = 511
Score = 435 bits (1119), Expect = e-119
Identities = 235/425 (55%), Positives = 290/425 (68%), Gaps = 19/425 (4%)
Frame = +2
Query: 8 ADACTRDPGYDEVAAALENIYKLSP----EDFTDWE--------------XXXXXXXXXX 133
A +C+ Y+E AA LE+IYKLSP ED D
Sbjct: 86 APSCSLGVDYNEAAARLESIYKLSPATSVEDDIDGSKVKVSRRRRRKEGGEEKKVVVRNN 145
Query: 134 XXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDE-EKLVREYSISTDLNRLDW 310
L L++R++L++ +E+ V A ++ +E++ E+LVR+YS S D+ LDW
Sbjct: 146 GMKEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKKQQEEEKIERLVRDYSASHDIVSLDW 205
Query: 311 KRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVPILRR 490
K++KIPPVL S EH WLFK MQPMKA+LQVK+EL K L RE E+A +N S ++R
Sbjct: 206 KKMKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQKSLGREPRETEIAGEINMSAAEVKR 265
Query: 491 HLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFEPRRG 670
+E+G+AARNKLIKHNLRLVLFV+NKYF + G KFQ+ CQAG RGLITAIDRFEP+R
Sbjct: 266 KIEIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGMRGLITAIDRFEPKRK 325
Query: 671 FRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEKETAD 850
FRLSTYGLFWIRH+I RSMT ++FT+VPFG+ESVR EI K K+EL FELGR PTE E +
Sbjct: 326 FRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKTKMELLFELGRLPTEDEVVE 385
Query: 851 RVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXXXXXX 1030
R++IS ERY +V++ ++PVFSL++KH VTQEEFINGITD+DG VG D RQPA
Sbjct: 386 RLKISPERYREVLRAAKPVFSLNSKHSVTQEEFINGITDVDG-VGADNRRQPAILRLALD 444
Query: 1031 XXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXPTRVD 1210
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR RVD
Sbjct: 445 DVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVD 504
Query: 1211 YLRRY 1225
YLR+Y
Sbjct: 505 YLRQY 509
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 435 bits (1118), Expect = e-119
Identities = 234/363 (64%), Positives = 271/363 (74%), Gaps = 5/363 (1%)
Frame = +2
Query: 152 LGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEE-----KLVREYSISTDLNRLDWKR 316
L L++R++L + KE E V + +RR LKED E KLVREYS +TDL LDWK+
Sbjct: 158 LNLDQRIALLKN-KEGEMVASS----ERRKLKEDTEDEKIDKLVREYSGATDLASLDWKK 212
Query: 317 VKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVPILRRHL 496
+KIPPVL S EH WLFK MQPMKAILQVKE L DL RE T GE+A+A N LR+ L
Sbjct: 213 MKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATNMDASELRKKL 272
Query: 497 EVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFEPRRGFR 676
EVG+AARNKLIKHNLRLVLFV+NKYF + A G +FQ+ CQAG +GLITAIDRFEP R FR
Sbjct: 273 EVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFR 332
Query: 677 LSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEKETADRV 856
LSTYGLFWIRH+I RSMT +SFTKVPFG+ES+R EIQK KLEL FEL R PT++E RV
Sbjct: 333 LSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLELLFELQRIPTDEEIIRRV 392
Query: 857 RISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXXXXXXXX 1036
+S ERY++V+K S+PV SLHA++ TQEE INGITD+DG V GDK +QPA
Sbjct: 393 GLSPERYHEVMKVSKPVSSLHARNKTTQEELINGITDVDG-VDGDKRKQPALLRLALDDV 451
Query: 1037 XXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXPTRVDYL 1216
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR PTRVDY+
Sbjct: 452 LDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYV 511
Query: 1217 RRY 1225
RRY
Sbjct: 512 RRY 514
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 435 bits (1118), Expect = e-119
Identities = 244/429 (56%), Positives = 285/429 (66%), Gaps = 26/429 (6%)
Frame = +2
Query: 17 CTRDPGYDEVAAALENIYKLSP-EDFTDWEXXXXXXXXXXXXXXXX-------------- 151
CT Y+E AA LENIYKLSP D +D E
Sbjct: 86 CTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISEGDKETEDRTGKI 145
Query: 152 -----------LGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSISTDLN 298
L LE+R+SLR + EE+ V A + R++ E + LVREYS STDL
Sbjct: 146 IVRNRAKKAKRLSLEKRISLRI-KNEEKLVSSAGKRKDRKNENEKIDDLVREYSASTDLV 204
Query: 299 RLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVP 478
LDWK++KIPPVL+S EH WLFK MQPMKA+LQVKE L ++L E T ELA A N V
Sbjct: 205 SLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTDVELAKATNMDVL 264
Query: 479 ILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFE 658
+R+ + VG+AARNKLIKHNLRLVLFVI KYF + A G KFQ+FCQAG +GLITAIDRFE
Sbjct: 265 QVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAGVKGLITAIDRFE 324
Query: 659 PRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEK 838
P+R FRLSTYGLFWIRH+I RSMTL+SFT+V FG+ES+R EIQK KLEL F+L RQP E
Sbjct: 325 PKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLKRQPMED 384
Query: 839 ETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXX 1018
E ++VRIS ERY++V + S+PV SLH++H TQEEFI GI D+D GGD RQ A
Sbjct: 385 EIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVD---GGDDRRQSALLR 441
Query: 1019 XXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXP 1198
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR P
Sbjct: 442 LALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP 501
Query: 1199 TRVDYLRRY 1225
TRVDYLRRY
Sbjct: 502 TRVDYLRRY 510
>ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Glycine max]
Length = 507
Score = 435 bits (1118), Expect = e-119
Identities = 234/428 (54%), Positives = 289/428 (67%), Gaps = 28/428 (6%)
Frame = +2
Query: 26 DPGYDEVAAALENIYKLSP-------------------------EDFTDWEXXXXXXXXX 130
D Y+E AA LEN+YKLSP + + +
Sbjct: 83 DVDYNEAAAMLENLYKLSPASDNAECIDGKIKRVSRRGKKVVDESEEKELKGDWVVRNQN 142
Query: 131 XXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLK---EDEEKLVREYSISTDLNR 301
L L++R+SL+ + +E + RK+R++ E E+L+REYS+STD
Sbjct: 143 KNKKPKRLNLDQRISLKNNKSGDEVIPT----RKKRNVGNKIEKIEELIREYSVSTDFVS 198
Query: 302 LDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVPI 481
+DWKR++IPPVLSS EH WLFK MQPMKA+LQVKE+L ++L RE GELADA N S+
Sbjct: 199 MDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADATNMSITQ 258
Query: 482 LRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFEP 661
+R+ ++VGQAARNKLIKHNLRLVLFVINKYF + A+G +FQ+ CQAG +GLITAIDRFEP
Sbjct: 259 VRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITAIDRFEP 318
Query: 662 RRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEKE 841
R FRLSTY LFWIRH+I RSMTL++FT+VPFG+ESVR EIQK K EL+FEL R PTE+E
Sbjct: 319 NRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFELQRSPTEEE 378
Query: 842 TADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXXX 1021
+RV IS ERY+DV+K S+ + SL+++H TQEEFINGI D DG V GD +QPA
Sbjct: 379 IIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDG-VNGDNRKQPALLRL 437
Query: 1022 XXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXPT 1201
KPKESLV+RQR+GLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 438 ALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHSA 497
Query: 1202 RVDYLRRY 1225
R+DYLRRY
Sbjct: 498 RLDYLRRY 505
>ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Glycine max]
Length = 509
Score = 433 bits (1114), Expect = e-119
Identities = 233/430 (54%), Positives = 288/430 (66%), Gaps = 30/430 (6%)
Frame = +2
Query: 26 DPGYDEVAAALENIYKLSPEDFT---------------------------DWEXXXXXXX 124
D Y+E AA LENIYKLSP T + +
Sbjct: 83 DVDYNEAAAMLENIYKLSPASHTGNAECIDDKIKRVSRRGKKVVDESEEKELKGDRVVRR 142
Query: 125 XXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLK---EDEEKLVREYSISTDL 295
L L++R+SL+ ++ +E + RK+R+ + E E+L+REYS+S D
Sbjct: 143 QNKNKKAKRLTLDQRISLKNNKRGDEVIPT----RKKRNFRNRIEKIEELIREYSVSNDF 198
Query: 296 NRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSV 475
+DWKR++IPPVLSS EH WLFK MQPMKA+LQVKE+L K+L RE GELADA N S+
Sbjct: 199 ISMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQKELAREPADGELADATNMSI 258
Query: 476 PILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRF 655
+++ ++VGQAARNKLIKHNLRLVLFVINKYF + A+G +FQ+ CQAG +GLITAIDRF
Sbjct: 259 TQVKKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITAIDRF 318
Query: 656 EPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTE 835
EP R FRLSTY LFWIRH+I RSMTL+SF +VPFG+ESVR EIQK K EL+F+L R PTE
Sbjct: 319 EPNRRFRLSTYSLFWIRHAIIRSMTLSSFIRVPFGLESVRAEIQKAKTELTFKLQRSPTE 378
Query: 836 KETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXX 1015
+E +RV IS ERY+D++K S+ + SL+++H TQEEFINGI D DG V GD +QPA
Sbjct: 379 EEIIERVHISPERYHDIIKASKSILSLNSRHTTTQEEFINGIVDDDG-VNGDNRKQPALL 437
Query: 1016 XXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXX 1195
KPKESLV+RQR+GLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 438 RLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLNH 497
Query: 1196 PTRVDYLRRY 1225
R+DYLRRY
Sbjct: 498 SARLDYLRRY 507
>ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like
factor 5B [Glycine max]
Length = 507
Score = 432 bits (1112), Expect = e-118
Identities = 233/428 (54%), Positives = 288/428 (67%), Gaps = 28/428 (6%)
Frame = +2
Query: 26 DPGYDEVAAALENIYKLSP-------------------------EDFTDWEXXXXXXXXX 130
D Y+E AA LEN+YKLSP + + +
Sbjct: 83 DVDYNEAAAMLENLYKLSPASDNAECIDGKIKRVSRRGKKVVDESEEKELKGDWVVRNQN 142
Query: 131 XXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLK---EDEEKLVREYSISTDLNR 301
L L++R+SL+ + +E + RK+R++ E E+L+REYS+STD
Sbjct: 143 KNKKPKRLNLDQRISLKNNKSGDEVIPT----RKKRNVGNKIEKIEELIREYSVSTDFVS 198
Query: 302 LDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVPI 481
+DWKR++IPPVLSS EH WLFK MQPMKA+LQVKE+L ++L RE GELADA N S+
Sbjct: 199 MDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADATNMSITQ 258
Query: 482 LRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFEP 661
+R+ ++VGQAARNKLIKHNLRLVLFVINKYF + A+G +FQ+ CQAG +GLITAIDRFEP
Sbjct: 259 VRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITAIDRFEP 318
Query: 662 RRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEKE 841
R FRLSTY LFWIRH+I RSMTL++FT+VPFG+ESVR EIQK K EL+FEL R PTE+E
Sbjct: 319 NRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFELQRSPTEEE 378
Query: 842 TADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXXX 1021
+RV IS ERY+DV+K S+ + SL+++H TQEEFINGI D DG V GD +QPA
Sbjct: 379 IIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDG-VNGDNRKQPALLRL 437
Query: 1022 XXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXPT 1201
KPKESLV+R R+GLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 438 ALDDVLDSLKPKESLVIRXRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHSA 497
Query: 1202 RVDYLRRY 1225
R+DYLRRY
Sbjct: 498 RLDYLRRY 505
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 430 bits (1105), Expect = e-118
Identities = 244/431 (56%), Positives = 297/431 (68%), Gaps = 25/431 (5%)
Frame = +2
Query: 8 ADACTRDPGYDEVAAALENIYKLSP--EDFTDWEXXXXXXXXXXXXXXXX---------- 151
A C+ D Y+E AA LENI+KLSP ED +D E
Sbjct: 85 ATPCSLDLDYNEAAAKLENIFKLSPMTED-SDKECKDGRSKRGQKRSKKSANRPGDGIVR 143
Query: 152 --------LGLEERVSLRQQRKEEESVE--EANSGRKRRDLK-EDEE--KLVREYSISTD 292
L L++R++L+ +RK + + E S RK+++ K ED+E +LVR+YS STD
Sbjct: 144 NQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKNEDDEIDRLVRDYSASTD 203
Query: 293 LNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTS 472
L LDWK++KIPPVL S EHT LFK +QPMKA+++V+EEL K L RE T GELA+A N +
Sbjct: 204 LVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREPTEGELANATNMN 263
Query: 473 VPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDR 652
V +RR LEVG+AARNKLIKHNLRLVLFVINKYF + A+G KFQ+ CQAG +GLITAIDR
Sbjct: 264 VIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDR 323
Query: 653 FEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPT 832
FEP+R FRLSTY LFWIRH+I RSMTL+SFT+V FG++SVR EIQ+ KLEL EL R PT
Sbjct: 324 FEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPT 383
Query: 833 EKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAX 1012
E E +V IS ERY +V++ ++PV+SLH++H T EE INGITD++G+ GGD RQPA
Sbjct: 384 EGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGT-GGDNRRQPAL 442
Query: 1013 XXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXX 1192
KPKESLV+RQRYGLDGKG RTLGEIAGNLNISREMVR
Sbjct: 443 LRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLK 502
Query: 1193 XPTRVDYLRRY 1225
P RVDYLRRY
Sbjct: 503 HPARVDYLRRY 513
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 1 [Solanum
lycopersicum]
Length = 516
Score = 429 bits (1103), Expect = e-117
Identities = 227/360 (63%), Positives = 267/360 (74%), Gaps = 2/360 (0%)
Frame = +2
Query: 152 LGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDE--EKLVREYSISTDLNRLDWKRVKI 325
L L++R++L + + E + ++ RK + EDE +KLVREYS +TDL LDWK++KI
Sbjct: 158 LNLDQRIALLKNK--EGKMLASSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKI 215
Query: 326 PPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVPILRRHLEVG 505
PPVL S EHTWLFK MQPMKAILQVKE L DL RE T GE+A+A N LR+ LE G
Sbjct: 216 PPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAG 275
Query: 506 QAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFEPRRGFRLST 685
+AARNKLIKHNLRLVLFV+NKYF + A +FQ+ CQAG +GLITAIDRFEP R FRLST
Sbjct: 276 RAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLST 335
Query: 686 YGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEKETADRVRIS 865
YGLFWIRH+I R MT +SFTKVPFG+ES+R EIQK KLEL FEL R PT+ E RV S
Sbjct: 336 YGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFS 395
Query: 866 LERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXXXXXXXXXXX 1045
ERY++V+K S+P+FSLHA++ TQEE INGITD+DG V GDK +QPA
Sbjct: 396 PERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDG-VDGDKRKQPALLRLALDDVLDS 454
Query: 1046 XKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXPTRVDYLRRY 1225
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR PTRVDY+RRY
Sbjct: 455 LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRY 514
>ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, partial [Capsella rubella]
gi|482556108|gb|EOA20300.1| hypothetical protein
CARUB_v10000608mg, partial [Capsella rubella]
Length = 557
Score = 429 bits (1102), Expect = e-117
Identities = 230/429 (53%), Positives = 289/429 (67%), Gaps = 23/429 (5%)
Frame = +2
Query: 8 ADACTRDPGYDEVAAALENIYKLSP-EDFTDWE---------------------XXXXXX 121
A +C+ Y+E AA LENIYKLSP +D E
Sbjct: 128 APSCSLGVDYNEAAARLENIYKLSPTTTISDDEAVDDGGSKGKVSPRRKRKQRGEEKKVV 187
Query: 122 XXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDE-EKLVREYSISTDLN 298
L L++R++L++ +E+ V A ++ +E++ + LVR+YS+S D+
Sbjct: 188 VRNNVKKDKRLSLDKRIALKRNCQEKPFVASAEKKVTKKQQEEEKIDMLVRDYSVSNDIL 247
Query: 299 RLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVP 478
LDWK++KIPPVLSS EH WLFK MQPMKA+L+VK+EL K L RE E+A + +
Sbjct: 248 SLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLEVKDELQKSLGREPREAEIAGEIKMTTG 307
Query: 479 ILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFE 658
+++ +E+G+AARNKLIKHNLRLVLFV+NKYF E G KFQ+ CQAG +GLITAIDRFE
Sbjct: 308 EVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFQEFTNGPKFQDLCQAGMKGLITAIDRFE 367
Query: 659 PRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEK 838
P+R FRLSTYGLFWIRH+I RSMT ++FT+VPFG+ESVR EI K K+EL FELGR PTE
Sbjct: 368 PKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKMELLFELGRLPTED 427
Query: 839 ETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAXXX 1018
E R++I+ ERY +V++ ++PVFSL++KH VTQEEFINGITD+DG VG D RQPA
Sbjct: 428 EVIKRLKITPERYREVLRAAKPVFSLNSKHAVTQEEFINGITDVDG-VGADNRRQPALLR 486
Query: 1019 XXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXXXP 1198
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 487 LALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQ 546
Query: 1199 TRVDYLRRY 1225
RVDYLR+Y
Sbjct: 547 ARVDYLRQY 555
>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
[Glycine max]
Length = 512
Score = 427 bits (1098), Expect = e-117
Identities = 232/431 (53%), Positives = 292/431 (67%), Gaps = 23/431 (5%)
Frame = +2
Query: 2 VSADACTRDPGYDEVAAALENIYKLSP-------EDFTD------W----------EXXX 112
V CT D Y+E AA LENIYKLSP ED W +
Sbjct: 83 VETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDIDSKVERVLWRRRKVGNEHDDENC 142
Query: 113 XXXXXXXXXXXXXLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSISTD 292
L L++R++L+ KEE +++ R ++ ++ + L+R+YS STD
Sbjct: 143 DIVVRNQNKKAKRLSLDKRITLKNNAKEEV-IDQTQKIRNVKNRVQNIDVLIRDYSASTD 201
Query: 293 LNRLDWKRVKIPPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTS 472
L +DWK++KIP VL S EH WLFK MQPMKA+LQ KE+L + + +E T GELADA N S
Sbjct: 202 LVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKEDL-QSVGKEITDGELADATNMS 260
Query: 473 VPILRRHLEVGQAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDR 652
+ +R+ +EVG+AARNKLIKHNLRLVLFVI+KYF + A+G +FQ+ CQAG +GLITAIDR
Sbjct: 261 IIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASGRRFQDLCQAGVKGLITAIDR 320
Query: 653 FEPRRGFRLSTYGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPT 832
FEP+R +LSTY LFWIRHSI RS+TL+SFT+VPFG+E VR +IQ+ KL+L+FEL R PT
Sbjct: 321 FEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPT 380
Query: 833 EKETADRVRISLERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPAX 1012
E+E +R+ IS ERY +V+K S+P+ SLH++HI TQEE+INGITD+DG V GD RQ A
Sbjct: 381 EEELVERIGISPERYYEVMKASKPILSLHSRHITTQEEYINGITDVDG-VNGDNRRQLAV 439
Query: 1013 XXXXXXXXXXXXKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRXXXXXXXXXXX 1192
KPKESLV+RQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 440 LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLK 499
Query: 1193 XPTRVDYLRRY 1225
P R+DYLRRY
Sbjct: 500 HPARLDYLRRY 510