BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00029677
         (534 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containi...   174   1e-41
ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutr...   173   2e-41
ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Caps...   171   9e-41
gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]     171   1e-40
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar...   170   2e-40
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ...   169   3e-40
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   168   8e-40
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   167   2e-39
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   167   2e-39
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia...   166   3e-39
gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wall...   166   4e-39
gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus pe...   165   5e-39
ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containi...   165   5e-39
gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea ...   165   7e-39
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   165   7e-39
ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39

>ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum lycopersicum]
          Length = 625

 Score =  174 bits (441), Expect = 1e-41
 Identities = 85/177 (48%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N+ML   +K G  + A  +F  +P KDV SW I++DG A++G++ +AR  FD MP RD
Sbjct: 255 SWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMPVRD 314

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMII-SGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           V+S N+++AGY +NG   EA++VF  M+  S   PD++T  + LSAV++LG I +G  +H
Sbjct: 315 VISCNAIMAGYVKNGHCLEALKVFHDMLSDSSPAPDSTTALLALSAVSELGYIDEGIALH 374

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
            YI+++  P+ G +GVALIDMY+KCG VD A+ +FN I +K  DHWN+MI G A+HG
Sbjct: 375 CYIEENGFPVAGKLGVALIDMYAKCGSVDSAMGVFNDIQEKNVDHWNAMIGGLAIHG 431



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 3/177 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMP--CRD 182
           N ++  Y++ G ++  +++F  M ++D  S+N IIDG  + G + VA  LFD MP   R+
Sbjct: 161 NCLISMYVRCGFVEYGHRVFDRMCMRDSVSYNTIIDGYVKCGMLDVACRLFDFMPIEMRN 220

Query: 183 VVSWNSLIAGYKENGESKE-AIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           +VSWN+L+ GY +  +  + A E+F +M     + D  +  ++L      G   +   + 
Sbjct: 221 LVSWNALLTGYVKLDQGFDVAWELFDRM----PQRDLVSWNLMLYCCVKSGNAEKATALF 276

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
             I K D+    +    ++D Y+K G +DIA   F+ +P ++    N++++G   +G
Sbjct: 277 DMIPKKDV----VSWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVKNG 329



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/113 (24%), Positives = 59/113 (52%)
 Frame = +3

Query: 177 RDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWI 356
           +D   WN ++  +    +  +A ++F  M+ +G   D  ++++VL A + +G I +G  +
Sbjct: 85  KDPFLWNVIMKSFSHGNDPHKAFQMFCLMLENGVFVDEYSISIVLKACSKMGFITRGMQV 144

Query: 357 HLYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
           H  + K     D  +   LI MY +CG+V+    +F+ +  ++   +N++I G
Sbjct: 145 HGLLRKIGFGSDVFLQNCLISMYVRCGFVEYGHRVFDRMCMRDSVSYNTIIDG 197


>ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutrema salsugineum]
           gi|557115218|gb|ESQ55501.1| hypothetical protein
           EUTSA_v10024877mg [Eutrema salsugineum]
          Length = 535

 Score =  173 bits (438), Expect = 2e-41
 Identities = 86/177 (48%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N +L  Y++KG ++ A  +F  M  ++V SWN +I G A  G +  A+ELFD MP +D
Sbjct: 178 SWNSLLSAYVEKGLVEEARGVFDEMDERNVESWNFMISGYAAAGLVNEAKELFDSMPVKD 237

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISG-KKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           VVSWN++++ Y   G   E +EVF +M+ S  +KPD  TL  VLSA A+LG + QG W+H
Sbjct: 238 VVSWNAMVSAYAHVGCYSEVLEVFNEMLNSSTEKPDGFTLVNVLSACANLGSLSQGEWVH 297

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           +Y DKH I +DG +  AL+DMYSKCG VD AL +F +  +K+   WNSMISG +VHG
Sbjct: 298 VYTDKHGIEIDGFLATALVDMYSKCGKVDKALEVFRATSKKDVSTWNSMISGLSVHG 354



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/112 (29%), Positives = 57/112 (50%)
 Frame = +3

Query: 195 NSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDK 374
           NS+I  Y  +   + A+  F +M++    PD  +   VL A A      +GR IH    K
Sbjct: 79  NSVIRAYANSSAPESALTAFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFLK 138

Query: 375 HDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
            D+  D  V   L+++Y + GY +IA  + +++P+++   WNS++S     G
Sbjct: 139 SDLISDVFVENTLVNVYGRSGYFEIARKVLDTMPERDVVSWNSLLSAYVEKG 190



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
 Frame = +3

Query: 81  VKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIK 260
           + DV   N +++   R G  ++AR++ D MP RDVVSWNSL++ Y E G  +EA  VF +
Sbjct: 142 ISDVFVENTLVNVYGRSGYFEIARKVLDTMPERDVVSWNSLLSAYVEKGLVEEARGVFDE 201

Query: 261 MIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVG-VALIDMYSKCG 437
           M     + +  +   ++S  A  GL+ + + +        +P+  +V   A++  Y+  G
Sbjct: 202 M----DERNVESWNFMISGYAAAGLVNEAKELF-----DSMPVKDVVSWNAMVSAYAHVG 252

Query: 438 YVDIALSIFNSI 473
                L +FN +
Sbjct: 253 CYSEVLEVFNEM 264



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
 Frame = +3

Query: 108 IIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPD 287
           ++D  ++ G++  A E+F     +DV +WNS+I+G   +G   +A+E+F +M+  G KP+
Sbjct: 315 LVDMYSKCGKVDKALEVFRATSKKDVSTWNSMISGLSVHGLGNDALEIFSEMVHEGFKPN 374

Query: 288 NSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGV--------ALIDMYSKCGYV 443
           + T    LSA   +G++ Q R +          ++ + GV         ++D+  + G  
Sbjct: 375 SITFIATLSACNHVGMLDQARRLF-------ETMNSVYGVEPTIEHYGCMVDLLGRMGKF 427

Query: 444 DIALSIFNSIPQKE 485
           + A  + N  P  E
Sbjct: 428 EEAEELVNETPADE 441


>ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Capsella rubella]
           gi|482552205|gb|EOA16398.1| hypothetical protein
           CARUB_v10004552mg [Capsella rubella]
          Length = 537

 Score =  171 bits (433), Expect = 9e-41
 Identities = 83/177 (46%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N +L  Y++KG ++ A  +F  M  ++V SWN +I G A  G +K A+E+FD MP +D
Sbjct: 180 SWNSLLSAYLEKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEIFDSMPVKD 239

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMII-SGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           VVSWN+++  Y   G   E +EVF +M+  S +KPD  TL  VLSA A LG + QG W+H
Sbjct: 240 VVSWNAMVTAYAHVGCYNEVLEVFNEMLDDSTEKPDGFTLVNVLSACASLGSLSQGEWVH 299

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           +YIDKH I ++G +  AL+DMYSKCG +D AL +F +  +++   WNS+ISG +VHG
Sbjct: 300 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISGLSVHG 356



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
 Frame = +3

Query: 108 IIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPD 287
           ++D  ++ G++  A E+F     RDV +WNS+I+G   +G  K+A+E+F +M+  G KP+
Sbjct: 317 LVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISGLSVHGLGKDALEIFSEMVYEGFKPN 376

Query: 288 NSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGV--------ALIDMYSKCGYV 443
             T   VLSA   +GL+ Q R +          ++ + G+         ++D+  + G +
Sbjct: 377 GITFIGVLSACNHVGLLDQARRLFEM-------MNSVYGIEPTVEHYGCMVDLLGRMGKI 429

Query: 444 DIALSIFNSIPQKERDHWNSMISGS 518
           + A  + N IP  E       + GS
Sbjct: 430 EEAEELVNEIPADEASMLLESLLGS 454



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/106 (30%), Positives = 53/106 (50%)
 Frame = +3

Query: 195 NSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDK 374
           NS+I  Y  +   + A+ VF  M++    PD  +   VL A A      +GR IH    K
Sbjct: 81  NSVIRAYANSSTPEMALVVFRDMLLGPVFPDKYSFTFVLKACAAFSGFEEGRQIHGLFMK 140

Query: 375 HDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMIS 512
             +  D  V   L+++Y + GY +IA  + + +P ++   WNS++S
Sbjct: 141 SGLMTDVFVENTLVNVYGRSGYFEIARKVLDKMPVRDAVSWNSLLS 186



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = +3

Query: 87  DVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMI 266
           DV   N +++   R G  ++AR++ D MP RD VSWNSL++ Y E G  +EA  +F +M 
Sbjct: 146 DVFVENTLVNVYGRSGYFEIARKVLDKMPVRDAVSWNSLLSAYLEKGLVEEARALFDEM- 204

Query: 267 ISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVG-VALIDMYSKCGYV 443
              ++ +  +   ++S  A  GL+ + + I        +P+  +V   A++  Y+  G  
Sbjct: 205 ---EERNVESWNFMISGYAAAGLVKEAKEIF-----DSMPVKDVVSWNAMVTAYAHVGCY 256

Query: 444 DIALSIFNSI 473
           +  L +FN +
Sbjct: 257 NEVLEVFNEM 266


>gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]
          Length = 626

 Score =  171 bits (432), Expect = 1e-40
 Identities = 82/176 (46%), Positives = 122/176 (69%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N M++ Y+K+G+++ A  +F  MP +D+ SW  +IDG ++LGR+ VAR LF+ MP RD
Sbjct: 247 SWNTMINGYVKRGKIEDARSLFNRMPKRDIVSWANLIDGYSKLGRIHVARSLFNEMPDRD 306

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           VV+ N+++AGY  NG   E +E+F  M      PD +TL + LSAVA LG I +G  +H 
Sbjct: 307 VVACNAMMAGYVGNGYFMEGLEIFRHMQNGDVSPDVTTLLIALSAVAQLGHIEKGVALHF 366

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           YI ++ +PL   +GVALIDMY+KCG +D A+++F  + ++  DHWN+MI G A+HG
Sbjct: 367 YIQENGVPLGRKLGVALIDMYAKCGSIDKAIAVFEGMEERSVDHWNAMIGGYAIHG 422



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 56/176 (31%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPC--RD 182
           N ++  Y++ G ++ A Q+F  M  +D  S+N +IDG  + G + +ARELFD MP   ++
Sbjct: 155 NGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMIDGYVKCGMIDLARELFDCMPLEEKN 214

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           +V+WNS+I+GY ++ + + A E+F  M     + D+ +   +++     G I   R +  
Sbjct: 215 LVTWNSMISGYAQS-DLEFAWELFETM----PERDSVSWNTMINGYVKRGKIEDARSLFN 269

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
            + K DI    +    LID YSK G + +A S+FN +P ++    N+M++G   +G
Sbjct: 270 RMPKRDI----VSWANLIDGYSKLGRIHVARSLFNEMPDRDVVACNAMMAGYVGNG 321



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 34/112 (30%), Positives = 61/112 (54%)
 Frame = +3

Query: 180 DVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           D   WN++I  Y    + K+A  +F  M+ +G + D  + +++L A   LGL+ +G  IH
Sbjct: 80  DPFLWNAVIKSYSHGCDPKQAFVMFCMMLENGVRVDKFSFSLILKACGRLGLVKEGLQIH 139

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
             + K +I  D  +   L+  Y +CG V+ A  +F+ + +++   +NSMI G
Sbjct: 140 GLLKKMEIGSDLYLQNGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMIDG 191



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/149 (29%), Positives = 74/149 (49%)
 Frame = +3

Query: 87  DVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMI 266
           D+   N ++    R G ++ AR++FD M  RD VS+NS+I GY + G    A E+F  M 
Sbjct: 150 DLYLQNGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMIDGYVKCGMIDLARELFDCMP 209

Query: 267 ISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGVALIDMYSKCGYVD 446
           +  K  +  T   ++S  A   L F         ++     D +    +I+ Y K G ++
Sbjct: 210 LEEK--NLVTWNSMISGYAQSDLEFAWELFETMPER-----DSVSWNTMINGYVKRGKIE 262

Query: 447 IALSIFNSIPQKERDHWNSMISGSAVHGR 533
            A S+FN +P+++   W ++I G +  GR
Sbjct: 263 DARSLFNRMPKRDIVSWANLIDGYSKLGR 291


>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098703|sp|O49399.2|PP321_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g18840 gi|5738365|emb|CAA16741.2| putative protein
           [Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
           putative protein [Arabidopsis thaliana]
           gi|332658697|gb|AEE84097.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 545

 Score =  170 bits (431), Expect = 2e-40
 Identities = 84/177 (47%), Positives = 117/177 (66%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N +L  Y++KG +  A  +F  M  ++V SWN +I G A  G +K A+E+FD MP RD
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRD 267

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMII-SGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           VVSWN+++  Y   G   E +EVF KM+  S +KPD  TL  VLSA A LG + QG W+H
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           +YIDKH I ++G +  AL+DMYSKCG +D AL +F +  +++   WNS+IS  +VHG
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHG 384



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
 Frame = +3

Query: 108 IIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPD 287
           ++D  ++ G++  A E+F     RDV +WNS+I+    +G  K+A+E+F +M+  G KP+
Sbjct: 345 LVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404

Query: 288 NSTLAMVLSAVADLGLIFQGRWI-----HLYIDKHDIPLDGIVGVALIDMYSKCGYVDIA 452
             T   VLSA   +G++ Q R +      +Y  +  I   G     ++D+  + G ++ A
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYG----CMVDLLGRMGKIEEA 460

Query: 453 LSIFNSIPQKE 485
             + N IP  E
Sbjct: 461 EELVNEIPADE 471



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/106 (30%), Positives = 54/106 (50%)
 Frame = +3

Query: 195 NSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDK 374
           NS+I  Y  +   + A+ VF +M++    PD  +   VL A A      +GR IH    K
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168

Query: 375 HDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMIS 512
             +  D  V   L+++Y + GY +IA  + + +P ++   WNS++S
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/177 (46%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N+ML   +K G  + A  +F  +P KDV SW I++DG A++G++ +AR  FD MP RD
Sbjct: 255 SWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMPVRD 314

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGK-KPDNSTLAMVLSAVADLGLIFQGRWIH 359
           V+S N+++AGY +NG   EA++VF  M+      PD++T  + LSAVA+LG I +G  +H
Sbjct: 315 VISCNAIMAGYVKNGHCLEALKVFHDMLRGNSLAPDSTTALLALSAVAELGYIDEGIALH 374

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
            YI+++   + G +GVALIDMY+KCG +D A+ +FN I +K  DHWN+MI G A+HG
Sbjct: 375 CYIEENGFLVAGKLGVALIDMYAKCGSIDSAMGVFNDIQEKNVDHWNAMIGGLAIHG 431



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 3/177 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMP--CRD 182
           N ++  Y++ G ++  + +F  M ++D  S+N +IDG  + G + VA  LFD MP   R+
Sbjct: 161 NCLISMYVRCGFVEYGHHVFDRMCLRDSVSYNTMIDGYVKCGMLDVACRLFDFMPIEMRN 220

Query: 183 VVSWNSLIAGYKENGESKE-AIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           +VSWN+++ GY +  +  + A E+F KM     + D  +  ++L      G   +   + 
Sbjct: 221 LVSWNAMLTGYVKLDQGFDVAWELFDKM----PERDLVSWNLMLYCCVKSGNAEKATALF 276

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
             I K D+    +    ++D Y+K G +DIA   F+ +P ++    N++++G   +G
Sbjct: 277 DMIPKKDV----VSWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVKNG 329



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/113 (26%), Positives = 59/113 (52%)
 Frame = +3

Query: 177 RDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWI 356
           +D   WN ++  +    +  +A +VF  M+ +G   D  +L++VL A + +G + +G  +
Sbjct: 85  KDPFLWNVIMKSFSHGNDPYKAFQVFCLMLENGVFVDEYSLSIVLKACSRMGFVKRGMQV 144

Query: 357 HLYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
           H  + K     D  +   LI MY +CG+V+    +F+ +  ++   +N+MI G
Sbjct: 145 HGLLRKIGFGSDVFLQNCLISMYVRCGFVEYGHHVFDRMCLRDSVSYNTMIDG 197


>ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 673

 Score =  169 bits (429), Expect = 3e-40
 Identities = 81/177 (45%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +3

Query: 6   FNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDV 185
           +N M+D Y+K G+++ A ++F +MP K+V SWN ++ G AR GR+K AR LFD M  RD 
Sbjct: 206 WNAMIDGYIKCGDVEAAKELFEHMPSKNVGSWNAMVSGFARCGRLKDARGLFDSMTERDE 265

Query: 186 VSWNSLIAGYKENGESKEAIEVFIKMIISG-KKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           +SW+++I GY + G  KEA+EVF +M       P    L+ VL+A A++G + QG+W+H 
Sbjct: 266 ISWSAMIDGYVQGGYHKEALEVFNEMQKEKIASPSKFVLSSVLAACANVGALDQGKWVHG 325

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHGR 533
           YI K+ I +D ++G AL+DMY+KCG +D+A  +F ++ +KE   WN+MI G A+HGR
Sbjct: 326 YIKKNSIQVDAVLGTALVDMYAKCGRLDMAWEVFENVKRKEVSTWNAMIGGLAMHGR 382



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
 Frame = +3

Query: 147 ARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVAD 326
           A ++FD +   +V  WN +I G  EN E+ ++I  + KM+    +P+  T  M+  A   
Sbjct: 90  ALKVFDNVWKPNVFVWNIMIKGCVENYEALKSISFYYKMVDMNSRPNKFTYPMLFKACRL 149

Query: 327 LGLIFQGRWIHLYIDKHDIPLDGIV---GV----------------------------AL 413
           +  + +G  IH ++ K  +  DG +   G+                            A+
Sbjct: 150 VQAVEEGLQIHAHVVKQQLSEDGHIRSAGIQMYASFGLVEEARRILLEDAASDVVCWNAM 209

Query: 414 IDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHGR 533
           ID Y KCG V+ A  +F  +P K    WN+M+SG A  GR
Sbjct: 210 IDGYIKCGDVEAAKELFEHMPSKNVGSWNAMVSGFARCGR 249



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
 Frame = +3

Query: 27  YMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLI 206
           Y+KK  +Q+           D      ++D  A+ GR+ +A E+F+ +  ++V +WN++I
Sbjct: 326 YIKKNSIQV-----------DAVLGTALVDMYAKCGRLDMAWEVFENVKRKEVSTWNAMI 374

Query: 207 AGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVA-----DLGLIFQGRWIHLYID 371
            G   +G + +A++VF KM     +P+  T    LSA A     D GL        +Y  
Sbjct: 375 GGLAMHGRADDALDVFFKMQGKNLEPNGITFLNALSACAHGEFVDEGLTIFSSMKEMYGM 434

Query: 372 KHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIP-QKERDHWNSMISGSAVHG 530
           + ++   G V    +DM+ + G ++ A  + NS+P +     + +++    +HG
Sbjct: 435 EAEVEHYGCV----VDMFGRAGLLEEAEQVINSMPIEPSAAVYGALLGACRIHG 484


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  169 bits (429), Expect = 3e-40
 Identities = 78/206 (37%), Positives = 130/206 (63%), Gaps = 31/206 (15%)
 Frame = +3

Query: 6   FNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDV 185
           +N ++D Y + GE+ +A Q+F  MP +D  SW +++DG ++ G+++ AR+LFD MPCR++
Sbjct: 181 WNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNL 240

Query: 186 VSWNSLI-------------------------------AGYKENGESKEAIEVFIKMIIS 272
           VSWN++I                               AGY+ NG+  +A+++F  M+  
Sbjct: 241 VSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKL 300

Query: 273 GKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGVALIDMYSKCGYVDIA 452
           G +P ++TL  VLSAV+ L ++ +GRWIH Y++K+   LDGI+G +LI+MY+KCG ++ A
Sbjct: 301 GSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESA 360

Query: 453 LSIFNSIPQKERDHWNSMISGSAVHG 530
           L++F +I +K+  HW ++I G  +HG
Sbjct: 361 LTVFRAIQKKKVGHWTAIIVGLGIHG 386



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 48/144 (33%), Positives = 80/144 (55%)
 Frame = +3

Query: 90  VTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMII 269
           V+S  + +  + ++  +  AR +FD +  R ++ WN++I  Y EN  S + I +F +++ 
Sbjct: 47  VSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH 106

Query: 270 SGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGVALIDMYSKCGYVDI 449
               PDN TL  V+   A LG++ +G+ IH    K     D  V  +L++MYSKCG +D 
Sbjct: 107 E-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDC 165

Query: 450 ALSIFNSIPQKERDHWNSMISGSA 521
           A  +F+ +  K+   WNS+I G A
Sbjct: 166 ARKVFDGMIDKDVVLWNSLIDGYA 189



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
 Frame = +3

Query: 87  DVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMI 266
           DV     +++  ++ G +  AR++FD M  +DVV WNSLI GY   GE   A+++F +M 
Sbjct: 146 DVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM- 204

Query: 267 ISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVG-VALIDMYSKCGYV 443
               + D  +  +++  ++  G +   R +        +P   +V   A+I+ Y K G  
Sbjct: 205 ---PERDAFSWTVLVDGLSKCGKVESARKLF-----DQMPCRNLVSWNAMINGYMKSGDF 256

Query: 444 DIALSIFNSIPQKERDHWNSMISGSAVHGR 533
           D AL +F  +P  +   WN MI+G  ++G+
Sbjct: 257 DSALELFYQMPIWDLVTWNLMIAGYELNGQ 286


>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313808|gb|EFH44231.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 535

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/177 (46%), Positives = 116/177 (65%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N +L  Y+ KG ++ A  +F  M  ++V SWN +I G A  G +K ARE+FD MP +D
Sbjct: 178 SWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKD 237

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMII-SGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           VVSWN+++  Y   G   E +EVF  M+  S ++PD  TL  VLSA A LG + QG W+H
Sbjct: 238 VVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVH 297

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           +YIDKH I ++G V  AL+DMYSKCG +D AL +F    +++   WNS+I+G +VHG
Sbjct: 298 VYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHG 354



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
 Frame = +3

Query: 108 IIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPD 287
           ++D  ++ G++  A E+F     RDV +WNS+I G   +G  K+A+E+F +M+  G KP+
Sbjct: 315 LVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPN 374

Query: 288 NSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGV--------ALIDMYSKCGYV 443
             T   VLSA   +GL+ Q R       K    ++ + G+         ++D+  + G  
Sbjct: 375 GITFIGVLSACNHVGLLDQAR-------KLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKF 427

Query: 444 DIALSIFNSIPQKE 485
           + A  + N +P  E
Sbjct: 428 EEAEELVNEVPADE 441



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/106 (32%), Positives = 55/106 (51%)
 Frame = +3

Query: 195 NSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDK 374
           NS+I  Y  +   + A+ VF +M++    PD  +   VL A A      +GR IH    K
Sbjct: 79  NSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMK 138

Query: 375 HDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMIS 512
            D+  D  V   LI++Y + GY +IA  + + +P ++   WNS++S
Sbjct: 139 SDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 184



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = +3

Query: 81  VKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIK 260
           V DV   N +I+   R G  ++AR++ D MP RD VSWNSL++ Y + G  +EA  +F +
Sbjct: 142 VTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDE 201

Query: 261 MIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVG-VALIDMYSKCG 437
           M    ++ +  +   ++S  A  GL+ + R +        +P+  +V   A++  Y+  G
Sbjct: 202 M----EERNVESWNFMISGYAAAGLVKEAREVF-----DSMPVKDVVSWNAMVTAYAHVG 252

Query: 438 YVDIALSIFN 467
             +  L +FN
Sbjct: 253 CYNEVLEVFN 262


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  168 bits (425), Expect = 8e-40
 Identities = 80/176 (45%), Positives = 114/176 (64%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N +L  Y ++G ++LA  +F  M  ++V SWN +I G   +G ++ AR +F   P ++
Sbjct: 176 SWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKN 235

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           VVSWN++I GY   G   E + +F  M  +G KPDN TL  VLSA A +G + QG W+H 
Sbjct: 236 VVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHA 295

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           YIDK+ I +DG V  AL+DMYSKCG ++ AL +FNS  +K+   WNS+ISG + HG
Sbjct: 296 YIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHG 351



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
 Frame = +3

Query: 108 IIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPD 287
           ++D  ++ G ++ A E+F+    +D+ +WNS+I+G   +G  + A+++F +M++ G KP+
Sbjct: 312 LVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPN 371

Query: 288 NSTLAMVLSAVADLGLIFQGR-WIHLYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIF 464
             T   VLSA +  GL+ +GR   +L +  H I         ++D+  + G ++ A  + 
Sbjct: 372 EVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELV 431

Query: 465 NSIPQKERD-HWNSMISGSAVHG 530
             +PQKE    W S++     HG
Sbjct: 432 QKMPQKEASVVWESLLGACRNHG 454



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/140 (22%), Positives = 67/140 (47%)
 Frame = +3

Query: 111 IDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDN 290
           +  N+    +  A  +F  +P  +   WN++I  Y  +   + A+ +F +M+ +   PD 
Sbjct: 49  VSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDK 108

Query: 291 STLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNS 470
            T    L +      + +GR IH ++ K  +  D  +   LI +Y+ CG ++ A  + + 
Sbjct: 109 YTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDR 168

Query: 471 IPQKERDHWNSMISGSAVHG 530
           + +++   WN+++S  A  G
Sbjct: 169 MLERDVVSWNALLSAYAERG 188


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  167 bits (422), Expect = 2e-39
 Identities = 77/176 (43%), Positives = 119/176 (67%)
 Frame = +3

Query: 6   FNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDV 185
           +N M+D Y+K G L+ A  +F  MPVK++ SWN++I+G A+ G +  AR+LFD M  RD 
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE 259

Query: 186 VSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLY 365
           +SW+S++ GY   G  KEA+E+F +M     +P    L+ VL+A +++G I QGRW+H Y
Sbjct: 260 ISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 366 IDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHGR 533
           + ++ I LD ++G AL+DMY+KCG +D+   +F  + ++E   WN+MI G A+HGR
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
 Frame = +3

Query: 27  YMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLI 206
           Y+K+  ++L           D      ++D  A+ GR+ +  E+F+ M  R++ +WN++I
Sbjct: 319 YLKRNSIKL-----------DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 207 AGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQG-RWIHLYIDKHDI 383
            G   +G +++A+E+F K+     KP+  TL  VL+A A  G + +G R      + + +
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 384 PLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDH-WNSMISGSAVHG 530
             +      ++D+  + G    A  + NS+P K     W +++    +HG
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
 Frame = +3

Query: 120 NARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTL 299
           N        A ++F  +P  +V  WN +I G  EN +  +AI  + +M+I  + P+  T 
Sbjct: 77  NPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDAR-PNKFTY 135

Query: 300 AMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGVA----------------------- 410
             +  A +    + +GR IH ++ KH I  D  +  A                       
Sbjct: 136 PTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGES 195

Query: 411 -------LIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
                  +ID Y KCG ++ A  +F  +P K    WN MI+G A  G
Sbjct: 196 DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGG 242


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  167 bits (422), Expect = 2e-39
 Identities = 77/176 (43%), Positives = 119/176 (67%)
 Frame = +3

Query: 6   FNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDV 185
           +N M+D Y+K G L+ A  +F  MPVK++ SWN++I+G A+ G +  AR+LFD M  RD 
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE 259

Query: 186 VSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLY 365
           +SW+S++ GY   G  KEA+E+F +M     +P    L+ VL+A +++G I QGRW+H Y
Sbjct: 260 ISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 366 IDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHGR 533
           + ++ I LD ++G AL+DMY+KCG +D+   +F  + ++E   WN+MI G A+HGR
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
 Frame = +3

Query: 27  YMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLI 206
           Y+K+  ++L           D      ++D  A+ GR+ +  E+F+ M  R++ +WN++I
Sbjct: 319 YLKRNSIKL-----------DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 207 AGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQG-RWIHLYIDKHDI 383
            G   +G +++A+E+F K+     KP+  TL  VL+A A  G + +G R      + + +
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 384 PLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDH-WNSMISGSAVHG 530
             +      ++D+  + G    A  + NS+P K     W +++    +HG
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
 Frame = +3

Query: 120 NARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTL 299
           N        A ++F  +P  +V  WN +I G  EN +  +AI  + +M+I  + P+  T 
Sbjct: 77  NPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDAR-PNKFTY 135

Query: 300 AMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGVA----------------------- 410
             +  A +    + +GR IH ++ KH I  D  +  A                       
Sbjct: 136 PTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGES 195

Query: 411 -------LIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
                  +ID Y KCG ++ A  +F  +P K    WN MI+G A  G
Sbjct: 196 DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGG 242


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  166 bits (421), Expect = 2e-39
 Identities = 85/178 (47%), Positives = 121/178 (67%), Gaps = 2/178 (1%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N M+D  +K G+++ A+ +F  MP +DV SW  ++DG A+LG + +AR LFD MP RD
Sbjct: 255 SWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERD 314

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKK--PDNSTLAMVLSAVADLGLIFQGRWI 356
           V+S N+++AGY +NG   EA+  F  M+ S K+  PDN+TL + LSA+A LG   +G  +
Sbjct: 315 VISCNAMMAGYVQNGHLMEALNFFHDML-SRKELFPDNATLLITLSAIAQLGHFDEGVAL 373

Query: 357 HLYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           H YI+ +   L   +GVALIDMY+KCG +D ALS+F  I  K  DHWN++I G A+HG
Sbjct: 374 HCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHG 431



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPC--RD 182
           N ++  Y++ G L +A Q+F  M  +D  S+N +IDG  + G +K ARELFDVMP   ++
Sbjct: 161 NCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKN 220

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           ++SWNS+I+GY     S+E + V  ++     K D  +   ++      G +     +  
Sbjct: 221 LISWNSMISGY---ARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFN 277

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
            + K D+    +    ++D Y+K G +DIA  +F+ +P+++    N+M++G   +G
Sbjct: 278 QMPKRDV----VSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNG 329



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/113 (30%), Positives = 63/113 (55%)
 Frame = +3

Query: 192 WNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYID 371
           WN++I  +    + +EA  +F  M+ +G   D  + ++VL A + LGLI +G  IH  + 
Sbjct: 90  WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 149

Query: 372 KHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           + +I  D  +   L+ +Y +CG + IA  +F+ + +++   +NSMI G   HG
Sbjct: 150 RMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHG 202



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 46/148 (31%), Positives = 74/148 (50%)
 Frame = +3

Query: 87  DVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMI 266
           DV   N ++    R G + +AR+LFD M  RD VS+NS+I GY ++G  K A E+F  M 
Sbjct: 156 DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215

Query: 267 ISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHDIPLDGIVGVALIDMYSKCGYVD 446
           +  K      L    S ++      +G  +   + +     D I   ++ID   KCG ++
Sbjct: 216 MEQK-----NLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKME 270

Query: 447 IALSIFNSIPQKERDHWNSMISGSAVHG 530
            A  +FN +P+++   W +M+ G A  G
Sbjct: 271 NAHHLFNQMPKRDVVSWANMVDGYAKLG 298


>gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
          Length = 570

 Score =  166 bits (420), Expect = 3e-39
 Identities = 88/177 (49%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N ++D Y+K G ++ A  +F  MP +DV +W  +IDG A+LG +  A+ LFDVMP RD
Sbjct: 218 SWNSLIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPHRD 277

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMII-SGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           VV++NS++ GY +N    EA+EVF  M   S   PD +TL +VLSA+A LG + +   IH
Sbjct: 278 VVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIH 337

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           LYI +    LDG +GVALIDMYSKCG +  A+++F  I  K  DHWN+MI G AVHG
Sbjct: 338 LYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKSIDHWNAMIGGLAVHG 394



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/171 (29%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMP--CRD 182
           N ++  Y+K   L  A Q+F  MP +D  S+N +IDG  + G ++ ARELFD+MP   ++
Sbjct: 124 NCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEKKN 183

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           ++SWNS+I GY    + ++ +++  K+     + D  +   ++      G I   + +  
Sbjct: 184 LISWNSMIGGY---AQREDGVDIASKLFAEMPEKDLISWNSLIDGYVKHGRIEDAKGLFD 240

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
            + + D+    +    +ID Y+K G+V  A S+F+ +P ++   +NSM+ G
Sbjct: 241 VMPRRDV----VTWATMIDGYAKLGFVHKAKSLFDVMPHRDVVAYNSMMGG 287



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/112 (29%), Positives = 58/112 (51%)
 Frame = +3

Query: 180 DVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           D   WN++I  +    + ++A+ +   MI +    D  +L++V  A + LG   +G  IH
Sbjct: 49  DPFLWNAVIKSHSHGVDPRQALFLLCSMIENNVPVDKFSLSLVTKACSRLGFAKEGMQIH 108

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
            ++ K  I  D  +   LI +Y KC  +  A  +F+ +PQ++   +NSMI G
Sbjct: 109 GFLTKTVICSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDG 160


>gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
          Length = 617

 Score =  166 bits (419), Expect = 4e-39
 Identities = 87/177 (49%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N M+D Y+K G ++ A  +F  MP +DV +W+ +IDG A+LG +  A+ LFD MP RD
Sbjct: 258 SWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRD 317

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMII-SGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           VVS+NS+IAGY +N  + EA+E+F  M   S   PD +TL +VLSA+A LG + +   +H
Sbjct: 318 VVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMH 377

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           LYI +    L G +GVALIDMYSKCG +  A+ +F  I  K  DHWN+MI G A+HG
Sbjct: 378 LYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHG 434



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 51/171 (29%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMP--CRD 182
           N ++  Y+K G L  A Q+F  MP +D  S+N +IDG  + G  + ARELFD+MP   ++
Sbjct: 164 NCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPEEMKN 223

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           ++SWNS+I+GY    ++ + +++  K+       D  +   ++      G I   +++  
Sbjct: 224 LISWNSMISGY---AQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFD 280

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
            + + D+    +    +ID Y+K G+V  A ++F+ +P ++   +NSMI+G
Sbjct: 281 VMPRRDV----VTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAG 327



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/112 (33%), Positives = 64/112 (57%)
 Frame = +3

Query: 180 DVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           D   WN++I  +    + + A+ +F  M+ +G   D  +L++VL A + LGL+ +G  IH
Sbjct: 89  DXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIH 148

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
            ++ K  +  D  +   LI +Y KCG++  A  IF+ +PQ++   +NSMI G
Sbjct: 149 GFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDG 200


>gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
          Length = 672

 Score =  165 bits (418), Expect = 5e-39
 Identities = 81/177 (45%), Positives = 121/177 (68%), Gaps = 2/177 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFY-NMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDV 185
           N M+D YMK G+++ A ++F  +MP K+V SWN ++ G AR G +K ARELFD M  +D 
Sbjct: 205 NAMIDGYMKCGDVEAAKELFEKHMPSKNVGSWNAMVSGLARCGMLKEARELFDGMSEKDE 264

Query: 186 VSWNSLIAGYKENGESKEAIEVFIKMIISGK-KPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           +SW++++ GY + G  KEA+E+F +M       P    L+ VL+A A++G + QG+W+H 
Sbjct: 265 ISWSAMVDGYIKRGCHKEALEIFNEMQKENLLSPRKFILSSVLAACANMGAVDQGKWVHA 324

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHGR 533
           YI ++ I LD ++G AL+DMY+KCG +D+A  +F +I QKE   WN+MI G A+HGR
Sbjct: 325 YIKRNTIQLDAVLGAALLDMYAKCGRLDMAWEVFENIKQKEISTWNAMIGGLAMHGR 381



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
 Frame = +3

Query: 27  YMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLI 206
           Y+K+  +QL           D      ++D  A+ GR+ +A E+F+ +  +++ +WN++I
Sbjct: 325 YIKRNTIQL-----------DAVLGAALLDMYAKCGRLDMAWEVFENIKQKEISTWNAMI 373

Query: 207 AGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVA-----DLGLIFQGRWIHLYID 371
            G   +G + +AIE+F KM  S  +P+  T   VL+A A     D GL F       Y  
Sbjct: 374 GGLAMHGRADDAIELFSKMQRSKLEPNGVTFLNVLNACAHSGFVDKGLNFFSSMKQFYGI 433

Query: 372 KHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDH-WNSMISGSAVHG 530
           + ++   G     ++DM+ + G ++ A  + NS+P K       +++    +HG
Sbjct: 434 EPEVEHYG----CMVDMFGRAGQLEEAEQLINSMPIKPNAAVLGALLGACRIHG 483


>ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 584

 Score =  165 bits (418), Expect = 5e-39
 Identities = 73/176 (41%), Positives = 118/176 (67%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           ++N M+      G+ + A ++F  MP ++V SWN ++ G ++LG + +AR LFD+MP RD
Sbjct: 194 TWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERD 253

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           VVSW S+I+ Y +NG + EA+E+F +M+++G   D+  +  +LSA A +G +  GRWIH 
Sbjct: 254 VVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHA 313

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           Y+ +  +  D  +  AL+DMY+KCG +D A  +FN++P+K    WN+M+SG A+HG
Sbjct: 314 YMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHG 369



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
 Frame = +3

Query: 27  YMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVVSWNSLI 206
           YMK+ +L+            DV     ++D  A+ G +  A  +F+ MP +++ SWN+++
Sbjct: 314 YMKRSKLR-----------NDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAML 362

Query: 207 AGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDK--HD 380
           +G   +G    A+E+F +M  +G  P++ T   VLSA + +G + +G      +DK  + 
Sbjct: 363 SGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNI 422

Query: 381 IPLDGIVGVALIDMYSKCGYVDIALSIFNSIP-QKERDHWNSMISGSAVHG 530
            P     G  ++D+  + G ++ A  +  ++P +     W ++++   VHG
Sbjct: 423 TPKVEHYG-CMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHG 472


>gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
          Length = 588

 Score =  165 bits (417), Expect = 7e-39
 Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N ++D Y+K G ++ A  +FY MP +DV +W  +IDG A+LG +  A+ LFD MP RD
Sbjct: 229 SWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRD 288

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMII-SGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           VV++NS++AGY +N  + EA+E+F  M   S   PD +TL +VLSA+A LG + +   +H
Sbjct: 289 VVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMH 348

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
           LYI +    L G +GVALIDMYSKCG +  A+ +F  I  K  DHWN+MI G A+HG
Sbjct: 349 LYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHG 405



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMP--CRD 182
           N ++  Y+K G L  A Q+F  MP +D  S+N +IDG  + G +  ARELFD+MP   ++
Sbjct: 135 NCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKN 194

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           ++SWNS+I+GY    ++ + + +  K+     + D  +   ++      G +   + +  
Sbjct: 195 LISWNSMISGY---AQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFY 251

Query: 363 YIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
            + + D+    +    +ID Y+K G+V  A ++F+ +P ++   +NSM++G
Sbjct: 252 VMPRRDV----VTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAG 298



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 38/112 (33%), Positives = 61/112 (54%)
 Frame = +3

Query: 180 DVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIH 359
           D   WN++I  +    + K A+  F  M+ +G   D  +L++VL A + LG + +G  IH
Sbjct: 60  DPFLWNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIH 119

Query: 360 LYIDKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISG 515
            ++ K  I  D  +   LI +Y KCG +  A  IF+ +PQ++   +NSMI G
Sbjct: 120 GFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDG 171


>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  165 bits (417), Expect = 7e-39
 Identities = 78/178 (43%), Positives = 120/178 (67%), Gaps = 2/178 (1%)
 Frame = +3

Query: 3   SFNIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRD 182
           S+N M+  Y+K GE++LA ++F  MP +D+ S N +IDG  + GR ++A ++F+ M  +D
Sbjct: 177 SWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKD 236

Query: 183 VVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHL 362
           VV+W S+I+ Y +N    +A+++F +M+  G +PD   +  VLSA+ADLG + +G+W+H 
Sbjct: 237 VVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHA 296

Query: 363 YIDKHDIPL-DGIVGVALIDMYSKCGYVDIALSIFNSIPQKER-DHWNSMISGSAVHG 530
           Y+  + I L  G +G ALIDMYSKCGY++ A  +F SI  +     WNSMISG A+HG
Sbjct: 297 YVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG 354



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/174 (22%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
 Frame = +3

Query: 27  YMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELF-DVMPCRDVVSWNSL 203
           ++++G+   AY     + +      + +ID  ++ G ++ A  +F  +   R++  WNS+
Sbjct: 287 FVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSM 346

Query: 204 IAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYIDKHD- 380
           I+G   +G ++EA+++F++M     +P+  T   +LS  +  GL+ +G++   +   H+ 
Sbjct: 347 ISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQF--YFESMHEK 404

Query: 381 ---IPLDGIVGVALIDMYSKCGYVDIALSIFNSIP-QKERDHWNSMISGSAVHG 530
              +P     G  +ID++ + G ++ AL +  ++P + +   W +++S S  HG
Sbjct: 405 YKIVPRIQHYG-CMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG 457


>ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Citrus sinensis]
          Length = 655

 Score =  164 bits (416), Expect = 9e-39
 Identities = 82/174 (47%), Positives = 116/174 (66%)
 Frame = +3

Query: 9   NIMLDDYMKKGELQLAYQMFYNMPVKDVTSWNIIIDGNARLGRMKVARELFDVMPCRDVV 188
           N +LD Y+K  ELQLA + F  + VKD  SWN I+ G A++G+++ A  LF+ MP RD++
Sbjct: 269 NALLDMYVKCKELQLARRTFDALEVKDAVSWNTIMSGLAKVGQLEYACTLFNHMPNRDII 328

Query: 189 SWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVLSAVADLGLIFQGRWIHLYI 368
           SWNSLIAGY +NG+     E+FI MI+   KPDN TL  ++SA A++G I QGRWIH  +
Sbjct: 329 SWNSLIAGYAQNGDYVMMRELFINMILDHVKPDNITLINLVSAAAEVGAIDQGRWIHGVV 388

Query: 369 DKHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKERDHWNSMISGSAVHG 530
            +    +D  +G  LIDMY KCG ++ AL++F  + +K+   W +MI+G A HG
Sbjct: 389 VRMGTMMDEFLGSVLIDMYCKCGSIERALTVFREVREKDVTVWTTMITGLAFHG 442



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
 Frame = +3

Query: 132 GRMKVARELFDVMPCRDVVSWNSLIAGYKENGESKEAIEVFIKMIISGKKPDNSTLAMVL 311
           G++++A +LF      DV S+N +I GY + G + EAI +F KM+ SG +PD  T   +L
Sbjct: 176 GQIRLAEKLFLCKQSPDVASFNIMIVGYAKKGCTLEAIRLFYKMMNSGLEPDEFTALGLL 235

Query: 312 SAVADLGLIFQGRWIHLYID--KHDIPLDGIVGVALIDMYSKCGYVDIALSIFNSIPQKE 485
                L  +  G+ +H +++  K     + I+G AL+DMY KC  + +A   F+++  K+
Sbjct: 236 VCCGQLADVQLGKSVHAWMERRKKVSSSNMILGNALLDMYVKCKELQLARRTFDALEVKD 295

Query: 486 RDHWNSMISGSAVHGR 533
              WN+++SG A  G+
Sbjct: 296 AVSWNTIMSGLAKVGQ 311