BLASTX nr result
ID: Zingiber23_contig00029650
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00029650
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1... 59 5e-07
ref|XP_006402974.1| hypothetical protein EUTSA_v10006102mg [Eutr... 58 2e-06
ref|XP_006291489.1| hypothetical protein CARUB_v10017638mg [Caps... 58 2e-06
ref|NP_567039.1| E3 ubiquitin ligase [Arabidopsis thaliana] gi|4... 58 2e-06
ref|XP_006362735.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 2e-06
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 3e-06
gb|EEE64216.1| hypothetical protein OsJ_19049 [Oryza sativa Japo... 57 3e-06
gb|EAY98544.1| hypothetical protein OsI_20457 [Oryza sativa Indi... 57 3e-06
ref|XP_002308856.2| zinc finger family protein [Populus trichoca... 57 3e-06
ref|XP_006380961.1| hypothetical protein POPTR_0006s03070g [Popu... 57 3e-06
ref|XP_003543313.1| PREDICTED: E3 ubiquitin-protein ligase RNF11... 57 3e-06
gb|ACU24601.1| unknown [Glycine max] 57 3e-06
ref|XP_004970279.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 56 4e-06
ref|XP_004499438.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 56 4e-06
gb|AFK33755.1| unknown [Medicago truncatula] 56 4e-06
ref|XP_002323210.1| zinc finger family protein [Populus trichoca... 56 4e-06
ref|NP_001148878.1| LOC100282497 [Zea mays] gi|195622884|gb|ACG3... 56 4e-06
gb|ACG31916.1| RHC1A [Zea mays] 56 4e-06
gb|ACF82310.1| unknown [Zea mays] gi|413952179|gb|AFW84828.1| pu... 56 4e-06
ref|NP_001132755.1| LOC100194242 [Zea mays] gi|194695312|gb|ACF8... 56 4e-06
>ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
vinifera]
Length = 269
Score = 59.3 bits (142), Expect = 5e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
HSDCI+PWLV HNSCPVCRH+LP GS
Sbjct: 163 HSDCIVPWLVQHNSCPVCRHELPPQGS 189
>ref|XP_006402974.1| hypothetical protein EUTSA_v10006102mg [Eutrema salsugineum]
gi|557104073|gb|ESQ44427.1| hypothetical protein
EUTSA_v10006102mg [Eutrema salsugineum]
Length = 323
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
HSDCI+PWLV HNSCPVCR +LPS GS
Sbjct: 216 HSDCIVPWLVQHNSCPVCRKELPSRGS 242
>ref|XP_006291489.1| hypothetical protein CARUB_v10017638mg [Capsella rubella]
gi|565467220|ref|XP_006291490.1| hypothetical protein
CARUB_v10017638mg [Capsella rubella]
gi|482560196|gb|EOA24387.1| hypothetical protein
CARUB_v10017638mg [Capsella rubella]
gi|482560197|gb|EOA24388.1| hypothetical protein
CARUB_v10017638mg [Capsella rubella]
Length = 326
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
HSDCI+PWLV HNSCPVCR +LPS GS
Sbjct: 216 HSDCIVPWLVQHNSCPVCRKELPSRGS 242
>ref|NP_567039.1| E3 ubiquitin ligase [Arabidopsis thaliana]
gi|42572705|ref|NP_974448.1| E3 ubiquitin ligase
[Arabidopsis thaliana] gi|79315364|ref|NP_001030874.1|
E3 ubiquitin ligase [Arabidopsis thaliana]
gi|15028361|gb|AAK76657.1| unknown protein [Arabidopsis
thaliana] gi|20465561|gb|AAM20263.1| unknown protein
[Arabidopsis thaliana] gi|66865932|gb|AAY57600.1| RING
finger family protein [Arabidopsis thaliana]
gi|332646016|gb|AEE79537.1| E3 ubiquitin ligase
[Arabidopsis thaliana] gi|332646017|gb|AEE79538.1| E3
ubiquitin ligase [Arabidopsis thaliana]
gi|332646018|gb|AEE79539.1| E3 ubiquitin ligase
[Arabidopsis thaliana]
Length = 320
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
HSDCI+PWLV HNSCPVCR +LPS GS
Sbjct: 209 HSDCIVPWLVQHNSCPVCRKELPSRGS 235
>ref|XP_006362735.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
tuberosum]
Length = 318
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGSDHIP 232
HSDCI+PWLV HNSCPVCR +LPS S +P
Sbjct: 214 HSDCIVPWLVRHNSCPVCRLELPSQASASVP 244
>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449529445|ref|XP_004171710.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 305
Score = 57.0 bits (136), Expect = 3e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
HSDCI+PWLV HNSCPVCR +LP+ GS
Sbjct: 205 HSDCIVPWLVQHNSCPVCRQELPAQGS 231
>gb|EEE64216.1| hypothetical protein OsJ_19049 [Oryza sativa Japonica Group]
Length = 286
Score = 57.0 bits (136), Expect = 3e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLP 256
H+DCI+PWLVHHNSCPVCRH LP
Sbjct: 198 HADCIVPWLVHHNSCPVCRHSLP 220
>gb|EAY98544.1| hypothetical protein OsI_20457 [Oryza sativa Indica Group]
Length = 286
Score = 57.0 bits (136), Expect = 3e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLP 256
H+DCI+PWLVHHNSCPVCRH LP
Sbjct: 198 HADCIVPWLVHHNSCPVCRHSLP 220
>ref|XP_002308856.2| zinc finger family protein [Populus trichocarpa]
gi|550335345|gb|EEE92379.2| zinc finger family protein
[Populus trichocarpa]
Length = 308
Score = 56.6 bits (135), Expect = 3e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGSD 241
HSDCI+PWLV HNSCPVCR +LP GS+
Sbjct: 209 HSDCIVPWLVQHNSCPVCRQELPPQGSN 236
>ref|XP_006380961.1| hypothetical protein POPTR_0006s03070g [Populus trichocarpa]
gi|550335344|gb|ERP58758.1| hypothetical protein
POPTR_0006s03070g [Populus trichocarpa]
Length = 264
Score = 56.6 bits (135), Expect = 3e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGSD 241
HSDCI+PWLV HNSCPVCR +LP GS+
Sbjct: 165 HSDCIVPWLVQHNSCPVCRQELPPQGSN 192
>ref|XP_003543313.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like isoformX1
[Glycine max] gi|571496500|ref|XP_006593628.1|
PREDICTED: E3 ubiquitin-protein ligase RNF115-like
isoform X2 [Glycine max]
Length = 236
Score = 56.6 bits (135), Expect = 3e-06
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHG 247
HSDCI+PWLVHHNSCPVCR +LP G
Sbjct: 151 HSDCIVPWLVHHNSCPVCRGKLPPEG 176
>gb|ACU24601.1| unknown [Glycine max]
Length = 236
Score = 56.6 bits (135), Expect = 3e-06
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHG 247
HSDCI+PWLVHHNSCPVCR +LP G
Sbjct: 151 HSDCIVPWLVHHNSCPVCRGKLPPEG 176
>ref|XP_004970279.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 325
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
H+DCIIPWLV HNSCPVCRH LPS S
Sbjct: 213 HTDCIIPWLVQHNSCPVCRHPLPSQRS 239
>ref|XP_004499438.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Cicer
arietinum] gi|502126791|ref|XP_004499439.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X2 [Cicer
arietinum] gi|502126793|ref|XP_004499440.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X3 [Cicer
arietinum] gi|502126795|ref|XP_004499441.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X4 [Cicer
arietinum]
Length = 264
Score = 56.2 bits (134), Expect = 4e-06
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHG 247
HSDCI+PWL+ HNSCPVCR +LP HG
Sbjct: 209 HSDCIVPWLIQHNSCPVCRIELPPHG 234
>gb|AFK33755.1| unknown [Medicago truncatula]
Length = 280
Score = 56.2 bits (134), Expect = 4e-06
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHG 247
HSDCI+PWL+ HNSCPVCR +LP HG
Sbjct: 213 HSDCIVPWLIQHNSCPVCRVELPPHG 238
>ref|XP_002323210.1| zinc finger family protein [Populus trichocarpa]
gi|222867840|gb|EEF04971.1| zinc finger family protein
[Populus trichocarpa]
Length = 308
Score = 56.2 bits (134), Expect = 4e-06
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
HSDCI+PWLV HNSCPVCR +LP GS
Sbjct: 209 HSDCIVPWLVQHNSCPVCRQELPPQGS 235
>ref|NP_001148878.1| LOC100282497 [Zea mays] gi|195622884|gb|ACG33272.1| RHC1A [Zea
mays]
Length = 345
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
H+DCIIPWLV HNSCPVCRH LPS S
Sbjct: 213 HTDCIIPWLVQHNSCPVCRHPLPSQRS 239
>gb|ACG31916.1| RHC1A [Zea mays]
Length = 305
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
H+DCIIPWLV HNSCPVCRH LPS S
Sbjct: 213 HTDCIIPWLVQHNSCPVCRHPLPSQRS 239
>gb|ACF82310.1| unknown [Zea mays] gi|413952179|gb|AFW84828.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 346
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
H+DCIIPWLV HNSCPVCRH LPS S
Sbjct: 213 HTDCIIPWLVQHNSCPVCRHPLPSQRS 239
>ref|NP_001132755.1| LOC100194242 [Zea mays] gi|194695312|gb|ACF81740.1| unknown [Zea
mays] gi|223946859|gb|ACN27513.1| unknown [Zea mays]
gi|414880104|tpg|DAA57235.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 325
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 324 HSDCIIPWLVHHNSCPVCRHQLPSHGS 244
H+DCIIPWLV HNSCPVCRH LPS S
Sbjct: 213 HTDCIIPWLVQHNSCPVCRHPLPSQRS 239