BLASTX nr result
ID: Zingiber23_contig00029595
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00029595
(376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD05229.1| putative PolI-like DNA polymerase [Oryza sativa ... 61 3e-08
ref|NP_001061112.1| Os08g0175300 [Oryza sativa Japonica Group] g... 61 3e-08
gb|EAZ05778.1| hypothetical protein OsI_28011 [Oryza sativa Indi... 61 3e-08
gb|EEC82982.1| hypothetical protein OsI_28013 [Oryza sativa Indi... 61 3e-08
gb|EEE68134.1| hypothetical protein OsJ_26228 [Oryza sativa Japo... 61 3e-08
dbj|BAB40805.2| PolI-like DNA polymerase [Oryza sativa] 61 3e-08
gb|AFW59606.1| chloroplast DNA polymerase [Zea mays] 58 2e-07
gb|AFW59605.1| chloroplast DNA polymerase [Zea mays] 58 2e-07
ref|XP_002447185.1| hypothetical protein SORBIDRAFT_06g030120 [S... 58 2e-07
gb|EMJ14887.1| hypothetical protein PRUPE_ppa000878mg [Prunus pe... 58 3e-07
ref|XP_002445146.1| hypothetical protein SORBIDRAFT_07g004810 [S... 57 3e-07
gb|EMS47443.1| hypothetical protein TRIUR3_20046 [Triticum urartu] 54 4e-07
ref|XP_004974390.1| PREDICTED: uncharacterized protein LOC101760... 57 4e-07
gb|AFW57120.1| hypothetical protein ZEAMMB73_274601 [Zea mays] 57 4e-07
ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|3555... 57 6e-07
ref|XP_002317586.2| DNA-directed DNA polymerase family protein [... 57 6e-07
gb|EMT04979.1| DNA polymerase I [Aegilops tauschii] 56 7e-07
ref|XP_004976982.1| PREDICTED: uncharacterized protein LOC101784... 56 7e-07
ref|XP_003579362.1| PREDICTED: uncharacterized protein LOC100823... 56 9e-07
ref|XP_003571415.1| PREDICTED: uncharacterized protein LOC100833... 56 9e-07
>dbj|BAD05229.1| putative PolI-like DNA polymerase [Oryza sativa Japonica Group]
gi|40253611|dbj|BAD05556.1| putative PolI-like DNA
polymerase [Oryza sativa Japonica Group]
Length = 1035
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK+A+SWYA+K
Sbjct: 1003 VVECMSKPFYGTNILKVDLAVDAKYAKSWYAAK 1035
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 982 QVHDEVILEGP 992
>ref|NP_001061112.1| Os08g0175300 [Oryza sativa Japonica Group]
gi|40253292|dbj|BAD05227.1| putative PolI-like DNA
polymerase [Oryza sativa Japonica Group]
gi|40253609|dbj|BAD05554.1| putative PolI-like DNA
polymerase [Oryza sativa Japonica Group]
gi|113623081|dbj|BAF23026.1| Os08g0175300 [Oryza sativa
Japonica Group] gi|215737038|dbj|BAG95967.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222640001|gb|EEE68133.1| hypothetical protein
OsJ_26226 [Oryza sativa Japonica Group]
Length = 1033
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK+A+SWYA+K
Sbjct: 1001 VVECMSKPFYGTNILKVDLAVDAKYAKSWYAAK 1033
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 980 QVHDEVILEGP 990
>gb|EAZ05778.1| hypothetical protein OsI_28011 [Oryza sativa Indica Group]
Length = 1033
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK+A+SWYA+K
Sbjct: 1001 VVECMSKPFYGTNILKVDLAVDAKYAKSWYAAK 1033
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 980 QVHDEVILEGP 990
>gb|EEC82982.1| hypothetical protein OsI_28013 [Oryza sativa Indica Group]
Length = 1028
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK+A+SWYA+K
Sbjct: 996 VVECMSKPFYGTNILKVDLAVDAKYAKSWYAAK 1028
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 975 QVHDEVILEGP 985
>gb|EEE68134.1| hypothetical protein OsJ_26228 [Oryza sativa Japonica Group]
Length = 982
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK+A+SWYA+K
Sbjct: 950 VVECMSKPFYGTNILKVDLAVDAKYAKSWYAAK 982
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 929 QVHDEVILEGP 939
>dbj|BAB40805.2| PolI-like DNA polymerase [Oryza sativa]
Length = 976
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK+A+SWYA+K
Sbjct: 944 VVECMSKPFYGTNILKVDLAVDAKYAKSWYAAK 976
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 923 QVHDEVILEGP 933
>gb|AFW59606.1| chloroplast DNA polymerase [Zea mays]
Length = 1154
Score = 58.2 bits (139), Expect(2) = 2e-07
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK A++WYA+K
Sbjct: 1122 VVECMSKPFYGTNILKVDLAVDAKCAQNWYAAK 1154
Score = 22.3 bits (46), Expect(2) = 2e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 1101 QVHDEVILEGP 1111
>gb|AFW59605.1| chloroplast DNA polymerase [Zea mays]
Length = 1033
Score = 58.2 bits (139), Expect(2) = 2e-07
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK A++WYA+K
Sbjct: 1001 VVECMSKPFYGTNILKVDLAVDAKCAQNWYAAK 1033
Score = 22.3 bits (46), Expect(2) = 2e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 980 QVHDEVILEGP 990
>ref|XP_002447185.1| hypothetical protein SORBIDRAFT_06g030120 [Sorghum bicolor]
gi|241938368|gb|EES11513.1| hypothetical protein
SORBIDRAFT_06g030120 [Sorghum bicolor]
Length = 992
Score = 58.2 bits (139), Expect(2) = 2e-07
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKVDLAVDAK A++WYA+K
Sbjct: 960 VVECMSKPFYGTNILKVDLAVDAKCAQNWYAAK 992
Score = 22.3 bits (46), Expect(2) = 2e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 939 QVHDEVILEGP 949
>gb|EMJ14887.1| hypothetical protein PRUPE_ppa000878mg [Prunus persica]
Length = 973
Score = 57.8 bits (138), Expect(2) = 3e-07
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF G+NFLKVDLAVDAK A++WY++K
Sbjct: 941 VVECMSKPFNGKNFLKVDLAVDAKCAQNWYSAK 973
Score = 22.3 bits (46), Expect(2) = 3e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 920 QVHDEVILEGP 930
>ref|XP_002445146.1| hypothetical protein SORBIDRAFT_07g004810 [Sorghum bicolor]
gi|241941496|gb|EES14641.1| hypothetical protein
SORBIDRAFT_07g004810 [Sorghum bicolor]
Length = 1178
Score = 57.4 bits (137), Expect(2) = 3e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF G N LKVDLAVDAK A+SWYA+K
Sbjct: 1146 VVECMSKPFHGTNILKVDLAVDAKCAKSWYAAK 1178
Score = 22.3 bits (46), Expect(2) = 3e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 1125 QVHDEVILEGP 1135
>gb|EMS47443.1| hypothetical protein TRIUR3_20046 [Triticum urartu]
Length = 56
Score = 53.5 bits (127), Expect(2) = 4e-07
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+ ECMSKPF+G N LKVDLAVDAK +SWY +K
Sbjct: 24 VAECMSKPFYGTNILKVDLAVDAKCGKSWYDAK 56
Score = 26.2 bits (56), Expect(2) = 4e-07
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 374 DKVRDEVILEGP 339
DKV DEVILEGP
Sbjct: 2 DKVHDEVILEGP 13
>ref|XP_004974390.1| PREDICTED: uncharacterized protein LOC101760461, partial [Setaria
italica]
Length = 984
Score = 57.0 bits (136), Expect(2) = 4e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N L VDLAVDAK A+SWYA+K
Sbjct: 952 VVECMSKPFYGTNILNVDLAVDAKCAKSWYAAK 984
Score = 22.3 bits (46), Expect(2) = 4e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 931 QVHDEVILEGP 941
>gb|AFW57120.1| hypothetical protein ZEAMMB73_274601 [Zea mays]
Length = 715
Score = 57.0 bits (136), Expect(2) = 4e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N L VDLAVDAK A+SWYA+K
Sbjct: 683 VVECMSKPFYGTNILNVDLAVDAKCAKSWYAAK 715
Score = 22.3 bits (46), Expect(2) = 4e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 662 QVHDEVILEGP 672
>ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|355518821|gb|AET00445.1| DNA
polymerase [Medicago truncatula]
Length = 1084
Score = 56.6 bits (135), Expect(2) = 6e-07
Identities = 23/33 (69%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G+N LKVDL+VDAK A++WY++K
Sbjct: 1052 VVECMSKPFYGKNILKVDLSVDAKCAQNWYSAK 1084
Score = 22.3 bits (46), Expect(2) = 6e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 1031 QVHDEVILEGP 1041
>ref|XP_002317586.2| DNA-directed DNA polymerase family protein [Populus trichocarpa]
gi|550328359|gb|EEE98198.2| DNA-directed DNA polymerase
family protein [Populus trichocarpa]
Length = 888
Score = 56.6 bits (135), Expect(2) = 6e-07
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+V+CMSKPF G+NFLKVDLAVDAK A++WY++K
Sbjct: 856 VVDCMSKPFGGKNFLKVDLAVDAKCAQNWYSAK 888
Score = 22.3 bits (46), Expect(2) = 6e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 835 QVHDEVILEGP 845
>gb|EMT04979.1| DNA polymerase I [Aegilops tauschii]
Length = 1177
Score = 56.2 bits (134), Expect(2) = 7e-07
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N L VDLAVDAK A++WYA+K
Sbjct: 1145 VVECMSKPFYGTNILSVDLAVDAKCAQNWYAAK 1177
Score = 22.3 bits (46), Expect(2) = 7e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 1124 QVHDEVILEGP 1134
>ref|XP_004976982.1| PREDICTED: uncharacterized protein LOC101784259 [Setaria italica]
Length = 1031
Score = 56.2 bits (134), Expect(2) = 7e-07
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N L VDLAVDAK A++WYA+K
Sbjct: 999 VVECMSKPFYGTNILNVDLAVDAKCAQNWYAAK 1031
Score = 22.3 bits (46), Expect(2) = 7e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 978 QVHDEVILEGP 988
>ref|XP_003579362.1| PREDICTED: uncharacterized protein LOC100823216 [Brachypodium
distachyon]
Length = 1031
Score = 55.8 bits (133), Expect(2) = 9e-07
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N L VDLAVDAK A++WYA+K
Sbjct: 999 VVECMSKPFYGTNILTVDLAVDAKCAQNWYAAK 1031
Score = 22.3 bits (46), Expect(2) = 9e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 978 QVHDEVILEGP 988
>ref|XP_003571415.1| PREDICTED: uncharacterized protein LOC100833898 [Brachypodium
distachyon]
Length = 986
Score = 55.8 bits (133), Expect(2) = 9e-07
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -1
Query: 340 LVECMSKPFFGENFLKVDLAVDAKFAESWYASK 242
+VECMSKPF+G N LKV+LAVDAK +SWYA+K
Sbjct: 954 VVECMSKPFYGTNILKVELAVDAKCVKSWYAAK 986
Score = 22.3 bits (46), Expect(2) = 9e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 371 KVRDEVILEGP 339
+V DEVILEGP
Sbjct: 933 QVHDEVILEGP 943