BLASTX nr result

ID: Zingiber23_contig00028466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00028466
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306795.1| PREDICTED: uncharacterized protein LOC101304...    71   2e-10
ref|XP_002273517.1| PREDICTED: uncharacterized protein LOC100266...    59   5e-07
ref|XP_002327851.1| predicted protein [Populus trichocarpa] gi|5...    59   7e-07
ref|XP_006293835.1| hypothetical protein CARUB_v10022819mg [Caps...    58   2e-06
ref|XP_002310453.2| hypothetical protein POPTR_0007s02340g [Popu...    57   3e-06
ref|XP_002336040.1| predicted protein [Populus trichocarpa]            57   3e-06
gb|EXC26765.1| hypothetical protein L484_023381 [Morus notabilis]      56   6e-06

>ref|XP_004306795.1| PREDICTED: uncharacterized protein LOC101304127 [Fragaria vesca
           subsp. vesca]
          Length = 633

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = +2

Query: 11  STAYTSSKRFCLDNTIKSQVAKMVTPFPDLAISRGGQPSHNFEEGSENYLPKLDYKVPAF 190
           S A  SSK+F L N ++SQ+ K + P+ DL+IS+    S   E GS++ LP+  Y+VP F
Sbjct: 206 SVASLSSKKFHLTNDVQSQIVKFLCPYIDLSISKLSSSSSVSEAGSKDILPQSSYEVPRF 265

Query: 191 AQSFYPLFADLHDI 232
           AQSFYP   DL++I
Sbjct: 266 AQSFYPFLVDLYNI 279


>ref|XP_002273517.1| PREDICTED: uncharacterized protein LOC100266921 [Vitis vinifera]
          Length = 635

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/77 (36%), Positives = 47/77 (61%)
 Frame = +2

Query: 2   KVTSTAYTSSKRFCLDNTIKSQVAKMVTPFPDLAISRGGQPSHNFEEGSENYLPKLDYKV 181
           KV + A   SKRFC+ +   S++ K+++ + D ++ +    S   + G  +++P+ DY+ 
Sbjct: 205 KVGNVASVGSKRFCVTDEAGSRMVKLLSSYLDSSVLKLTSSSSVSDVGLGDFVPRCDYEA 264

Query: 182 PAFAQSFYPLFADLHDI 232
           P FAQS YPL  DLH+I
Sbjct: 265 PPFAQSVYPLLEDLHNI 281


>ref|XP_002327851.1| predicted protein [Populus trichocarpa]
           gi|566211758|ref|XP_006372931.1| hypothetical protein
           POPTR_0017s06350g [Populus trichocarpa]
           gi|550319579|gb|ERP50728.1| hypothetical protein
           POPTR_0017s06350g [Populus trichocarpa]
          Length = 633

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/76 (39%), Positives = 47/76 (61%)
 Frame = +2

Query: 5   VTSTAYTSSKRFCLDNTIKSQVAKMVTPFPDLAISRGGQPSHNFEEGSENYLPKLDYKVP 184
           V S A  SSKRF LD+ ++S++ K+++ + D+++ +    S   E G +   P   ++VP
Sbjct: 204 VGSIALQSSKRFSLDDNVQSRMVKLLSSYMDVSLWKLSPSSSVSESGLKEIQPGNTFQVP 263

Query: 185 AFAQSFYPLFADLHDI 232
            FAQS YPL  DLH+I
Sbjct: 264 PFAQSVYPLLLDLHNI 279


>ref|XP_006293835.1| hypothetical protein CARUB_v10022819mg [Capsella rubella]
           gi|482562543|gb|EOA26733.1| hypothetical protein
           CARUB_v10022819mg [Capsella rubella]
          Length = 631

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/74 (40%), Positives = 46/74 (62%)
 Frame = +2

Query: 11  STAYTSSKRFCLDNTIKSQVAKMVTPFPDLAISRGGQPSHNFEEGSENYLPKLDYKVPAF 190
           S  ++SS+RF + N +++++ K+V+ F    +++   PS     G  N L    ++VPAF
Sbjct: 207 SAIFSSSRRFSIANDVQARMLKLVS-FQINQLNKELSPSRCVASGVSNELQSNSHEVPAF 265

Query: 191 AQSFYPLFADLHDI 232
           AQSFYPL  DLHDI
Sbjct: 266 AQSFYPLLVDLHDI 279


>ref|XP_002310453.2| hypothetical protein POPTR_0007s02340g [Populus trichocarpa]
           gi|550333959|gb|EEE90903.2| hypothetical protein
           POPTR_0007s02340g [Populus trichocarpa]
          Length = 639

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 46/77 (59%)
 Frame = +2

Query: 2   KVTSTAYTSSKRFCLDNTIKSQVAKMVTPFPDLAISRGGQPSHNFEEGSENYLPKLDYKV 181
           K  S +  SS+RF LD+ ++S++ K+ + + DL++ +    S   E G +   P   ++V
Sbjct: 209 KAGSISLQSSRRFSLDDNVQSRMVKLSSSYMDLSMRKLRPSSSVSESGLKEIHPGNSFQV 268

Query: 182 PAFAQSFYPLFADLHDI 232
           P FAQS YPL  DLH+I
Sbjct: 269 PPFAQSVYPLLQDLHNI 285


>ref|XP_002336040.1| predicted protein [Populus trichocarpa]
          Length = 639

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 46/77 (59%)
 Frame = +2

Query: 2   KVTSTAYTSSKRFCLDNTIKSQVAKMVTPFPDLAISRGGQPSHNFEEGSENYLPKLDYKV 181
           K  S +  SS+RF LD+ ++S++ K+ + + DL++ +    S   E G +   P   ++V
Sbjct: 209 KAGSISLQSSRRFSLDDNVQSRMVKLSSSYMDLSMRKLRPSSSVSESGLKEIHPGNSFQV 268

Query: 182 PAFAQSFYPLFADLHDI 232
           P FAQS YPL  DLH+I
Sbjct: 269 PPFAQSVYPLLQDLHNI 285


>gb|EXC26765.1| hypothetical protein L484_023381 [Morus notabilis]
          Length = 625

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   KVTSTAYT-SSKRFCLDNTIKSQVAKMVTPFPDLAISRGGQPSHNFEEGSENYLPKLDYK 178
           KV  +A T SS+R  L N I+SQ+ K+++P  +++ISR   PS +  E  +   P+ +Y+
Sbjct: 203 KVFGSAVTLSSRRLFLTNDIQSQMVKLLSPHLEMSISRLS-PSRSITE--KEIQPQDNYE 259

Query: 179 VPAFAQSFYPLFADLHDI 232
            P FAQS YPL  DLH+I
Sbjct: 260 APPFAQSVYPLLVDLHNI 277


Top