BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00028295
         (843 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF93479.1| class-I knotted1-like homeobox protein IBKN2 [Ip...   196   9e-48
dbj|BAM08928.1| class I knotted1-like homeobox protein [Asparagu...   194   3e-47
ref|XP_006472353.1| PREDICTED: homeobox protein knotted-1-like 2...   194   4e-47
ref|XP_006433688.1| hypothetical protein CICLE_v10001508mg [Citr...   194   4e-47
ref|NP_001233807.1| homeotic protein knotted-1 [Solanum lycopers...   194   4e-47
gb|EOY15624.1| KNOTTED-like from [Theobroma cacao]                    191   2e-46
dbj|BAM08929.1| class I knotted1-like homeobox protein [Asparagu...   191   2e-46
gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]      190   6e-46
emb|CBI19343.3| unnamed protein product [Vitis vinifera]              189   8e-46
ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2...   189   8e-46
gb|ADN43388.1| KNOX1 [Agave tequilana]                                188   2e-45
ref|XP_004498934.1| PREDICTED: homeobox protein knotted-1-like 2...   186   9e-45
ref|XP_002459312.1| hypothetical protein SORBIDRAFT_02g002200 [S...   186   9e-45
gb|AFZ78625.1| knotted-like protein [Populus tomentosa]               186   1e-44
gb|ADK26526.1| KNOTTED1-like protein [Petunia x hybrida]              186   1e-44
gb|AGV22122.1| KNOX transcription factor 3 [Betula luminifera]        185   2e-44
ref|XP_002301134.1| kn1-like family protein [Populus trichocarpa...   185   2e-44
gb|AAV49802.1| homeobox transcription factor KN3 [Populus tricho...   185   2e-44
ref|XP_006848881.1| hypothetical protein AMTR_s00026p00244220 [A...   185   2e-44
ref|NP_001105331.1| homeobox protein rough sheath 1 [Zea mays] g...   184   3e-44

>dbj|BAF93479.1| class-I knotted1-like homeobox protein IBKN2 [Ipomoea batatas]
          Length = 382

 Score =  196 bits (498), Expect = 9e-48
 Identities = 112/248 (45%), Positives = 140/248 (56%), Gaps = 6/248 (2%)
 Frame = +1

Query: 118 GREGDHNSHHNNNY--YPDAAYLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSALIA 291
           G  G H+ HH++    YP     H  P    S G+ ++++E   +KAKI++HPQYS L+ 
Sbjct: 78  GSSGSHHHHHHHQMFQYPLMIRDHLHPRQQESAGD-NSLSEGDAMKAKIIAHPQYSNLLE 136

Query: 292 AYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXXXXXX----DDPELDQFMEAYCDILVKYR 459
           AY+DCQKVGAPP++AA                         DPELDQFMEAY D+L+KYR
Sbjct: 137 AYVDCQKVGAPPEMAARLSAARQELEGKQRASFIGSRDSSKDPELDQFMEAYYDMLMKYR 196

Query: 460 DELNRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASG 639
           DEL RP QEA EF++ +ESQ N L           R+F+  +D+K EGVGSSEED D SG
Sbjct: 197 DELTRPFQEAMEFMRRIESQLNML------SDGPVRIFN--SDDKCEGVGSSEEDQDNSG 248

Query: 640 GETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELH 819
           GET+L EIDPR +D+E                               +ARQKLL WWELH
Sbjct: 249 GETELREIDPRVQDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELH 308

Query: 820 YKWPYPSE 843
           YKWPYPSE
Sbjct: 309 YKWPYPSE 316


>dbj|BAM08928.1| class I knotted1-like homeobox protein [Asparagus asparagoides]
          Length = 341

 Score =  194 bits (494), Expect = 3e-47
 Identities = 114/247 (46%), Positives = 135/247 (54%), Gaps = 20/247 (8%)
 Frame = +1

Query: 163 PDAAYLHRPPSAAPSQGEISAVA--------------EDSGVKAKIMSHPQYSALIAAYI 300
           P  A+ +  P+  P + E +A A              +D  +KAKI+SHPQYSAL+ AY+
Sbjct: 35  PPIAFYNPNPNQLPPKSEPAAAASSSQIPYARRLVSTDDETIKAKIVSHPQYSALLGAYM 94

Query: 301 DCQKVGAPPDVAAXXXXXXXXXXXXXXXXXXXX------DDPELDQFMEAYCDILVKYRD 462
           DCQKVGAPP++AA                           DPELDQFMEAYC++LVKYR+
Sbjct: 95  DCQKVGAPPELAARLSVIAREIEAQQQAAAASCRRDASSTDPELDQFMEAYCNMLVKYRE 154

Query: 463 ELNRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGG 642
           EL RPLQEA +FL+ VESQ N++            +FS  TDEK EGVGSSEED D SGG
Sbjct: 155 ELTRPLQEAMDFLRRVESQLNSI-----TNGATASIFS--TDEKCEGVGSSEEDQDGSGG 207

Query: 643 ETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHY 822
           E +  EIDPR EDKE                               EARQKLL WWELHY
Sbjct: 208 EAEHPEIDPRAEDKELKHHLLKKYSGYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHY 267

Query: 823 KWPYPSE 843
           KWPYPSE
Sbjct: 268 KWPYPSE 274


>ref|XP_006472353.1| PREDICTED: homeobox protein knotted-1-like 2-like [Citrus sinensis]
          Length = 379

 Score =  194 bits (492), Expect = 4e-47
 Identities = 110/245 (44%), Positives = 133/245 (54%), Gaps = 4/245 (1%)
 Frame = +1

Query: 121 REGDHNSHHNNNYYPDAAYLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSALIAAYI 300
           REG H+ H                    SQ E +  +E   +KAKI+SHPQYS+L+ AY+
Sbjct: 93  REGHHHHHQ-------------------SQQEGNESSETEAIKAKIISHPQYSSLLEAYV 133

Query: 301 DCQKVGAPPDVAAXXXXXXXXXXXXXXXXXXXXD----DPELDQFMEAYCDILVKYRDEL 468
           DCQKVGAPP+V A                    D    DPELDQFMEAY D+LVKYR+EL
Sbjct: 134 DCQKVGAPPEVVARLAAARQEFESRQRSSVNSRDSTNKDPELDQFMEAYYDMLVKYREEL 193

Query: 469 NRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGET 648
            RP+QEA +F++ +E+Q N L           R+F+   D+K EGVGSSEED + SGGET
Sbjct: 194 TRPIQEAMDFIRRIETQLNML------SNGPVRIFNSTDDQKCEGVGSSEEDQENSGGET 247

Query: 649 DLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKW 828
           +L EIDPR ED+E                               EARQKLL WWELHYKW
Sbjct: 248 ELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKW 307

Query: 829 PYPSE 843
           PYPSE
Sbjct: 308 PYPSE 312


>ref|XP_006433688.1| hypothetical protein CICLE_v10001508mg [Citrus clementina]
           gi|557535810|gb|ESR46928.1| hypothetical protein
           CICLE_v10001508mg [Citrus clementina]
          Length = 379

 Score =  194 bits (492), Expect = 4e-47
 Identities = 110/245 (44%), Positives = 133/245 (54%), Gaps = 4/245 (1%)
 Frame = +1

Query: 121 REGDHNSHHNNNYYPDAAYLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSALIAAYI 300
           REG H+ H                    SQ E +  +E   +KAKI+SHPQYS+L+ AY+
Sbjct: 93  REGHHHHHQ-------------------SQQEGNESSETEAIKAKIISHPQYSSLLEAYV 133

Query: 301 DCQKVGAPPDVAAXXXXXXXXXXXXXXXXXXXXD----DPELDQFMEAYCDILVKYRDEL 468
           DCQKVGAPP+V A                    D    DPELDQFMEAY D+LVKYR+EL
Sbjct: 134 DCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKDPELDQFMEAYYDMLVKYREEL 193

Query: 469 NRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGET 648
            RP+QEA +F++ +E+Q N L           R+F+   D+K EGVGSSEED + SGGET
Sbjct: 194 TRPIQEAMDFIRRIETQLNML------SNGPVRIFNSTDDQKCEGVGSSEEDQENSGGET 247

Query: 649 DLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKW 828
           +L EIDPR ED+E                               EARQKLL WWELHYKW
Sbjct: 248 ELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKW 307

Query: 829 PYPSE 843
           PYPSE
Sbjct: 308 PYPSE 312


>ref|NP_001233807.1| homeotic protein knotted-1 [Solanum lycopersicum]
           gi|3023974|sp|Q41330.1|KN1_SOLLC RecName: Full=Homeotic
           protein knotted-1; Short=TKN1 gi|1256575|gb|AAC49251.1|
           Knotted 1 (TKn1) [Solanum lycopersicum]
           gi|1588258|prf||2208273A Knotted-1 gene
          Length = 355

 Score =  194 bits (492), Expect = 4e-47
 Identities = 112/243 (46%), Positives = 135/243 (55%), Gaps = 4/243 (1%)
 Frame = +1

Query: 127 GDHNSHHNNNY-YPDAAYLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSALIAAYID 303
           G   SHHN+ + YP     H   S   S G   A      +KAKI++HPQ S L+ AY+D
Sbjct: 54  GGSTSHHNHTFHYPSIIRNHHHDSTETSGGGAGAGEVIEALKAKIIAHPQCSNLLDAYMD 113

Query: 304 CQKVGAPPDVAAXXXXXXXXXXXXXXXXXXXXD---DPELDQFMEAYCDILVKYRDELNR 474
           CQKVGAPP+VAA                    D   DPELDQFMEAY D+LVKYR+EL R
Sbjct: 114 CQKVGAPPEVAARLSAVRQEFEARQRRSLTDRDVSKDPELDQFMEAYYDMLVKYREELTR 173

Query: 475 PLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGETDL 654
           PLQEA EF++ +E+Q N L           R+F+  +++K EGVGSSEED D SGGET+L
Sbjct: 174 PLQEAMEFMQKIEAQLNML------GNAPVRIFN--SEDKCEGVGSSEEDQDNSGGETEL 225

Query: 655 LEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKWPY 834
            EIDPR ED+E                               +ARQKL+ WWELHYKWPY
Sbjct: 226 PEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPY 285

Query: 835 PSE 843
           PSE
Sbjct: 286 PSE 288


>gb|EOY15624.1| KNOTTED-like from [Theobroma cacao]
          Length = 369

 Score =  191 bits (486), Expect = 2e-46
 Identities = 106/215 (49%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
 Frame = +1

Query: 208 QGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXX 387
           +G  S+  E   +KAKI++HPQYS L+ AY+DCQKVGAPP+VAA                
Sbjct: 97  EGNESSSTEVEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVAARLAAARQEFEARQRSS 156

Query: 388 XXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXX 558
               D   DPELDQFMEAY D+LVKYR+EL RP+QEA +F++ +E+Q N L         
Sbjct: 157 VTSRDNSKDPELDQFMEAYYDMLVKYREELTRPIQEALDFMRRIEAQLNML------SNG 210

Query: 559 XXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXX 738
             R+F+  +DEK EGVGSSEED D SGGET+L EIDPR ED+E                 
Sbjct: 211 PVRIFN--SDEKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLK 268

Query: 739 XXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                         EARQKLL WWELHYKWPYPSE
Sbjct: 269 QELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSE 303


>dbj|BAM08929.1| class I knotted1-like homeobox protein [Asparagus officinalis]
          Length = 343

 Score =  191 bits (486), Expect = 2e-46
 Identities = 113/244 (46%), Positives = 133/244 (54%), Gaps = 11/244 (4%)
 Frame = +1

Query: 145 HNNNYYPDAAYLHRPPSAAPSQGEISAV-----AEDSGVKAKIMSHPQYSALIAAYIDCQ 309
           +N N  P+       P+AA S  +I         +D  +KAKI+SHPQYS L+ AY+DCQ
Sbjct: 40  YNPNPNPNQLPPKSEPAAAASSSQIPYARRLVSTDDETIKAKIVSHPQYSTLLGAYMDCQ 99

Query: 310 KVGAPPDVAAXXXXXXXXXXXXXXXXXXXXD------DPELDQFMEAYCDILVKYRDELN 471
           KVGAPP++AA                           DPELDQFMEAYC++LVKYR+EL 
Sbjct: 100 KVGAPPELAARLSVIAREIEAQQQAAAASCRRDASSADPELDQFMEAYCNMLVKYREELT 159

Query: 472 RPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGETD 651
           RPLQEA +FL+ VESQ N++            +FS  TDEK EGV SSEED D SGGE +
Sbjct: 160 RPLQEAMDFLRRVESQLNSI-----TNGATASIFS--TDEKCEGVASSEEDQDGSGGEAE 212

Query: 652 LLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKWP 831
             EIDPR EDKE                               EARQKLL WWELHYKWP
Sbjct: 213 HPEIDPRAEDKELKHHLLKKYSGYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHYKWP 272

Query: 832 YPSE 843
           YPSE
Sbjct: 273 YPSE 276


>gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]
          Length = 368

 Score =  190 bits (482), Expect = 6e-46
 Identities = 104/215 (48%), Positives = 128/215 (59%), Gaps = 3/215 (1%)
 Frame = +1

Query: 208 QGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXX 387
           QG  S+ +E   +KAKI++HPQYS L+ AY+DCQKVGAPP+V A                
Sbjct: 97  QGSESS-SEVEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVVARLAAARQEFESRQRSF 155

Query: 388 XXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXX 558
               D   DPELDQFMEAYCD+LVKYR+EL RP+QEA +F++ +E+Q N +         
Sbjct: 156 ITSRDNSKDPELDQFMEAYCDMLVKYREELTRPIQEAMDFMRRIETQLNMI------CHG 209

Query: 559 XXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXX 738
             R+F+  +D+K EGVGSSE+D D SGGET+L EIDPR ED+E                 
Sbjct: 210 PLRIFN--SDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLK 267

Query: 739 XXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                         EARQKLL WWELHYKWPYPSE
Sbjct: 268 QELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSE 302


>emb|CBI19343.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  189 bits (481), Expect = 8e-46
 Identities = 108/238 (45%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
 Frame = +1

Query: 139 SHHNNNYYPDAAYLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVG 318
           S H   ++      H+       Q    + +E   +KAKI++HPQYS L+ AY+DCQKVG
Sbjct: 46  SQHAQKFHYPIIRGHQTVDHQQQQQGNESFSEVEAIKAKIIAHPQYSNLLEAYMDCQKVG 105

Query: 319 APPDVAAXXXXXXXXXXXXXXXXXXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEA 489
           APP+V                      D   DPELDQFMEAY D+LVKYR+EL RPLQEA
Sbjct: 106 APPEVVERLAAVRQEFESRQRSSVTCRDASKDPELDQFMEAYYDMLVKYREELTRPLQEA 165

Query: 490 TEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDP 669
           T+F++ +ESQ N L           R+F+  +DEK EGVGSSEED D SGGET+L EIDP
Sbjct: 166 TDFMRRIESQLNML------SNGPVRIFT--SDEKCEGVGSSEEDQDNSGGETELPEIDP 217

Query: 670 RGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
           R ED+E                               +ARQKLL WWELHYKWPYPSE
Sbjct: 218 RAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSE 275


>ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2 [Vitis vinifera]
          Length = 370

 Score =  189 bits (481), Expect = 8e-46
 Identities = 108/238 (45%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
 Frame = +1

Query: 139 SHHNNNYYPDAAYLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVG 318
           S H   ++      H+       Q    + +E   +KAKI++HPQYS L+ AY+DCQKVG
Sbjct: 75  SQHAQKFHYPIIRGHQTVDHQQQQQGNESFSEVEAIKAKIIAHPQYSNLLEAYMDCQKVG 134

Query: 319 APPDVAAXXXXXXXXXXXXXXXXXXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEA 489
           APP+V                      D   DPELDQFMEAY D+LVKYR+EL RPLQEA
Sbjct: 135 APPEVVERLAAVRQEFESRQRSSVTCRDASKDPELDQFMEAYYDMLVKYREELTRPLQEA 194

Query: 490 TEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDP 669
           T+F++ +ESQ N L           R+F+  +DEK EGVGSSEED D SGGET+L EIDP
Sbjct: 195 TDFMRRIESQLNML------SNGPVRIFT--SDEKCEGVGSSEEDQDNSGGETELPEIDP 246

Query: 670 RGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
           R ED+E                               +ARQKLL WWELHYKWPYPSE
Sbjct: 247 RAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSE 304


>gb|ADN43388.1| KNOX1 [Agave tequilana]
          Length = 357

 Score =  188 bits (477), Expect = 2e-45
 Identities = 116/248 (46%), Positives = 132/248 (53%), Gaps = 12/248 (4%)
 Frame = +1

Query: 136 NSHHNNNYYPDAAYL----HRPPSAAPSQGEISAVAEDSG--VKAKIMSHPQYSALIAAY 297
           N H NN      + L     + P AA S G  S V+ D    +KAKI+SHP YSAL+ AY
Sbjct: 47  NPHPNNPLAQPKSELTVGSSQNPYAAASSGSRSIVSTDDEAIIKAKIISHPHYSALLGAY 106

Query: 298 IDCQKVGAPPDVAAXXXXXXXXXXXXXXXXXXXX------DDPELDQFMEAYCDILVKYR 459
           +DCQKVGA P+VAA                          +DPELDQFMEAYC++LVKYR
Sbjct: 107 MDCQKVGASPEVAARLSAVAREIEARQQASMSCRRDASSAEDPELDQFMEAYCNMLVKYR 166

Query: 460 DELNRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASG 639
           +EL RPLQEA  F + VESQ N+L            +FS   DEK EGVG SEED D SG
Sbjct: 167 EELTRPLQEAMNFFRGVESQLNSL-----TNGATASIFS-AADEKCEGVGFSEEDQDDSG 220

Query: 640 GETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELH 819
           GE +  EIDPR EDKE                               EARQKLL WWELH
Sbjct: 221 GEAEHPEIDPRAEDKELKRHLLKKYSRYLSSLRHELSKKKKKGKLPKEARQKLLNWWELH 280

Query: 820 YKWPYPSE 843
           YKWPYPSE
Sbjct: 281 YKWPYPSE 288


>ref|XP_004498934.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cicer arietinum]
          Length = 388

 Score =  186 bits (472), Expect = 9e-45
 Identities = 105/233 (45%), Positives = 129/233 (55%), Gaps = 3/233 (1%)
 Frame = +1

Query: 154 NYYPDAAYLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDV 333
           N + +  + H     +PS  E  A+      KAKI++HPQYS L+ AY+DCQK+GAPP+V
Sbjct: 105 NPHTNVMHNHHQGGGSPSSSEAEAI------KAKIIAHPQYSTLLEAYMDCQKIGAPPEV 158

Query: 334 AAXXXXXXXXXXXXXXXXXXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEATEFLK 504
            A                    +   DPELDQFMEAY D+LVKYR+EL RP+QEA +F+K
Sbjct: 159 VARLVSARQEFEAKQRSSINSRESSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMK 218

Query: 505 SVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDK 684
            +E+Q N L           R+F    D+K EGVGSSEED + SGGET+L EIDPR ED+
Sbjct: 219 RIENQLNML------CNGPVRIF---PDDKCEGVGSSEEDQENSGGETELPEIDPRAEDR 269

Query: 685 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
           E                               EARQKLL WWELHYKWPYPSE
Sbjct: 270 ELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSE 322


>ref|XP_002459312.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
           gi|241922689|gb|EER95833.1| hypothetical protein
           SORBIDRAFT_02g002200 [Sorghum bicolor]
          Length = 356

 Score =  186 bits (472), Expect = 9e-45
 Identities = 108/229 (47%), Positives = 127/229 (55%), Gaps = 2/229 (0%)
 Frame = +1

Query: 163 PDAAYLHRPPSAAP--SQGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVA 336
           P ++   + P A    S  E+S+ AE   +KAKI++HPQYSAL+AAY+DCQKVGAPPDV 
Sbjct: 66  PSSSQQQQSPYATKHASTAEMSS-AEAEAIKAKIVAHPQYSALLAAYLDCQKVGAPPDVL 124

Query: 337 AXXXXXXXXXXXXXXXXXXXXDDPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVES 516
                                D PELDQFMEAYC++LVKYR+EL RP+ EA EFLK VE+
Sbjct: 125 ERLTAMAAKLDARPPGRHEPRD-PELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEA 183

Query: 517 QFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXX 696
           Q +++                 TD K EGVGSSE+D D SG E D  EIDPR EDKE   
Sbjct: 184 QLDSISGGGGSSSSARLSL---TDGKSEGVGSSEDDMDPSGRENDPPEIDPRAEDKELKY 240

Query: 697 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                                       EARQKLL WWELHYKWPYPSE
Sbjct: 241 QLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSE 289


>gb|AFZ78625.1| knotted-like protein [Populus tomentosa]
          Length = 368

 Score =  186 bits (471), Expect = 1e-44
 Identities = 103/215 (47%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
 Frame = +1

Query: 208 QGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXX 387
           QG  S+ +E   +KAKI++HPQYS L+ AY+DCQKVGAPP+V A                
Sbjct: 97  QGSESS-SEVEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVVARLAAARQEFESRQRSF 155

Query: 388 XXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXX 558
               D   DPELDQFMEAY D+LVKYR+EL RP+QEA +F++ +E+Q N +         
Sbjct: 156 ITSRDNSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMI------CHG 209

Query: 559 XXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXX 738
             R+F+  +D+K EGVGSSE+D D SGGET+L EIDPR ED+E                 
Sbjct: 210 PLRIFN--SDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLK 267

Query: 739 XXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                         EARQKLL WWELHYKWPYPSE
Sbjct: 268 QELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSE 302


>gb|ADK26526.1| KNOTTED1-like protein [Petunia x hybrida]
          Length = 357

 Score =  186 bits (471), Expect = 1e-44
 Identities = 111/250 (44%), Positives = 138/250 (55%), Gaps = 8/250 (3%)
 Frame = +1

Query: 118 GREGDHNSHHNNNY-YPDAA----YLHRPPSAAPSQGEISAVAEDSGVKAKIMSHPQYSA 282
           G    + SHH++ + YP       + H+       + E S+  E  G+KAKI++HPQ S+
Sbjct: 49  GGSSSNTSHHHHTFQYPSIIRSGHHQHQTVHNHHHESENSS-GEVVGLKAKILAHPQCSS 107

Query: 283 LIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXXXXXXD---DPELDQFMEAYCDILVK 453
           L+ AY+DCQKVGAPP+V A                    D   DPELDQFMEAY D+LVK
Sbjct: 108 LLDAYMDCQKVGAPPEVMARLSTLRQEFEMRQRASLTGKDVAKDPELDQFMEAYYDMLVK 167

Query: 454 YRDELNRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPGTDEKGEGVGSSEEDFDA 633
           YR+EL RPLQEA +F++++E+Q N L           R F+   D K EGVGSSEED D 
Sbjct: 168 YREELTRPLQEAMDFMRTIETQLNML------GNGPVRAFN-SEDNKCEGVGSSEEDQDN 220

Query: 634 SGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARQKLLKWWE 813
           SGGET+L EIDPR ED+E                               +ARQKLL WWE
Sbjct: 221 SGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWE 280

Query: 814 LHYKWPYPSE 843
           LHYKWPYPSE
Sbjct: 281 LHYKWPYPSE 290


>gb|AGV22122.1| KNOX transcription factor 3 [Betula luminifera]
          Length = 376

 Score =  185 bits (470), Expect = 2e-44
 Identities = 105/215 (48%), Positives = 123/215 (57%), Gaps = 3/215 (1%)
 Frame = +1

Query: 208 QGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXX 387
           QG  S+  E   +KAKIM+HPQYS L+ AY+DCQKVGAPP+V A                
Sbjct: 103 QGNESSGGEVEDIKAKIMAHPQYSNLLEAYMDCQKVGAPPEVVARLAAARQEFEARQRSS 162

Query: 388 XXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXX 558
               +   DPELDQFMEAY D+LVKYRDEL RP+QEA +F++ +E+Q N L         
Sbjct: 163 VNSRENSKDPELDQFMEAYYDMLVKYRDELARPMQEAMDFMRRIETQLNML------SNG 216

Query: 559 XXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXX 738
             R+FS   D K EGVGSSEED D S GET+L EIDPR ED+E                 
Sbjct: 217 PVRIFSSDHD-KCEGVGSSEEDQDNSAGETELPEIDPRAEDRELKNHLLRKYSGYLSSLK 275

Query: 739 XXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                         +ARQKLL WWELHYKWPYPSE
Sbjct: 276 QELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSE 310


>ref|XP_002301134.1| kn1-like family protein [Populus trichocarpa]
           gi|222842860|gb|EEE80407.1| kn1-like family protein
           [Populus trichocarpa] gi|225626279|gb|ACN97189.1| KNOX
           transcription factor [Populus trichocarpa]
          Length = 368

 Score =  185 bits (470), Expect = 2e-44
 Identities = 103/215 (47%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
 Frame = +1

Query: 208 QGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXX 387
           QG  S+ +E   +KAKI++HPQYS L+ AY+DCQKVGAPP+V A                
Sbjct: 97  QGSESS-SEVEAIKAKIIAHPQYSNLMEAYMDCQKVGAPPEVVARLAAARQEFESRQRSF 155

Query: 388 XXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXX 558
               D   DPELDQFMEAY D+LVKYR+EL RP+QEA +F++ +E+Q N +         
Sbjct: 156 ITSRDNSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMI------CHG 209

Query: 559 XXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXX 738
             R+F+  +D+K EGVGSSE+D D SGGET+L EIDPR ED+E                 
Sbjct: 210 PLRIFN--SDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLK 267

Query: 739 XXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                         EARQKLL WWELHYKWPYPSE
Sbjct: 268 QELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSE 302


>gb|AAV49802.1| homeobox transcription factor KN3 [Populus trichocarpa x Populus
           deltoides]
          Length = 368

 Score =  185 bits (470), Expect = 2e-44
 Identities = 103/215 (47%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
 Frame = +1

Query: 208 QGEISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXX 387
           QG  S+ +E   +KAKI++HPQYS L+ AY+DCQKVGAPP+V A                
Sbjct: 97  QGSESS-SEVEAIKAKIIAHPQYSNLMEAYMDCQKVGAPPEVVARLAAARQEFESRQRSF 155

Query: 388 XXXXD---DPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXX 558
               D   DPELDQFMEAY D+LVKYR+EL RP+QEA +F++ +E+Q N +         
Sbjct: 156 ITSRDNSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMI------CHG 209

Query: 559 XXRLFSPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXX 738
             R+F+  +D+K EGVGSSE+D D SGGET+L EIDPR ED+E                 
Sbjct: 210 PLRIFN--SDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLK 267

Query: 739 XXXXXXXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                         EARQKLL WWELHYKWPYPSE
Sbjct: 268 QELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSE 302


>ref|XP_006848881.1| hypothetical protein AMTR_s00026p00244220 [Amborella trichopoda]
           gi|548852314|gb|ERN10462.1| hypothetical protein
           AMTR_s00026p00244220 [Amborella trichopoda]
          Length = 398

 Score =  185 bits (469), Expect = 2e-44
 Identities = 98/207 (47%), Positives = 124/207 (59%), Gaps = 3/207 (1%)
 Frame = +1

Query: 232 EDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVA---AXXXXXXXXXXXXXXXXXXXXD 402
           +D+ +KAKI++HPQYS+L+ AY+DCQ+VGAPP+V    +                     
Sbjct: 134 DDNAIKAKIVAHPQYSSLLEAYMDCQRVGAPPEVVDRLSAISRELETRQHSSASVGAAGS 193

Query: 403 DPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLFSPG 582
           DPELDQFMEAY D+LVKYR+EL RP+QEATEFL+ +ES+ N++           RLFS  
Sbjct: 194 DPELDQFMEAYYDMLVKYREELTRPIQEATEFLRRIESELNSI------SNGSVRLFS-- 245

Query: 583 TDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXXXXX 762
           +D+KG+G  SSEED D SGGET+L EIDPR ED+E                         
Sbjct: 246 SDDKGDGADSSEEDPDGSGGETELPEIDPRAEDRELKNHLLKKYSGYLGNLKLELSKKKK 305

Query: 763 XXXXXXEARQKLLKWWELHYKWPYPSE 843
                 +ARQ LL WW+LHYKWPYPSE
Sbjct: 306 KGKLPKDARQTLLSWWDLHYKWPYPSE 332


>ref|NP_001105331.1| homeobox protein rough sheath 1 [Zea mays]
           gi|3024577|sp|Q41853.1|RSH1_MAIZE RecName: Full=Homeobox
           protein rough sheath 1 gi|1008879|gb|AAA86287.1| RS1
           [Zea mays]
          Length = 351

 Score =  184 bits (468), Expect = 3e-44
 Identities = 104/210 (49%), Positives = 119/210 (56%)
 Frame = +1

Query: 214 EISAVAEDSGVKAKIMSHPQYSALIAAYIDCQKVGAPPDVAAXXXXXXXXXXXXXXXXXX 393
           E+SA AE   +KAKI++HPQYSAL+AAY+DCQKVGAPPDV                    
Sbjct: 81  EMSA-AEAEAIKAKIVAHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAKLDASAAGRHE 139

Query: 394 XXDDPELDQFMEAYCDILVKYRDELNRPLQEATEFLKSVESQFNALXXXXXXXXXXXRLF 573
             D PELDQFMEAYC++LVKYR+EL RP+ EA EFLK VE+Q + +            L 
Sbjct: 140 PRD-PELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSL- 197

Query: 574 SPGTDEKGEGVGSSEEDFDASGGETDLLEIDPRGEDKEXXXXXXXXXXXXXXXXXXXXXX 753
               D K EGVGSSE+D D +G E D  EIDPR EDKE                      
Sbjct: 198 ---ADGKSEGVGSSEDDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSK 254

Query: 754 XXXXXXXXXEARQKLLKWWELHYKWPYPSE 843
                    EARQKLL WWELHYKWPYPSE
Sbjct: 255 KKKKGKLPKEARQKLLHWWELHYKWPYPSE 284