BLASTX nr result

ID: Zingiber23_contig00028237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00028237
         (990 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004973157.1| PREDICTED: reticulon-like protein B21-like [...    71   6e-10
gb|AFW61968.1| hypothetical protein ZEAMMB73_167181 [Zea mays]         67   1e-08
ref|XP_002445424.1| hypothetical protein SORBIDRAFT_07g018020 [S...    65   3e-08
gb|EEE68393.1| hypothetical protein OsJ_26729 [Oryza sativa Japo...    62   3e-07
gb|EEC83262.1| hypothetical protein OsI_28591 [Oryza sativa Indi...    62   3e-07
ref|XP_003571613.1| PREDICTED: uncharacterized protein LOC100842...    61   8e-07
dbj|BAK07265.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   3e-06

>ref|XP_004973157.1| PREDICTED: reticulon-like protein B21-like [Setaria italica]
          Length = 651

 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 75/266 (28%), Positives = 113/266 (42%), Gaps = 32/266 (12%)
 Frame = -3

Query: 742 SVWEARMRVDAVNGGVKVFNAXXXXXXXXXXGMRVYRRLRRNQSD---------SIASSR 590
           SVWE RMR+D V GGVKVF+A          GMRVYRRLRRNQS+         + A+++
Sbjct: 39  SVWETRMRMDEVKGGVKVFSAGGADEPADEEGMRVYRRLRRNQSEGNAGAGTGAAAAAAK 98

Query: 589 KRRNWTAPQVEGRNPI----QLRKSREAKVLAIXXXXXXXXXXXGASVDIGIEDDGMK-- 428
           KRRNW A +     P+     LRKSR     A+                  +     K  
Sbjct: 99  KRRNWKASE-----PVTAIGDLRKSRSDAAAAVTTTTTTTTAVVARRAVARVTTPEKKVA 153

Query: 427 ------SFDDKE-MDLPAEKGNSVEEEEKTIS--PVHEIPVLSPAIDKNHDSLVPLPDVE 275
                   + KE + +   K    EEE K +S  PV E   L   +D+  D  +   + E
Sbjct: 154 PAAAVGGGEVKEVVVVEVHKAAPEEEEAKGVSEEPVEE--ELDDGVDELDDEELETEEEE 211

Query: 274 QRKQLNNWXXXXXXXXXXXPKLG------KKLNRTLILPSLDAEKKMMNHRAIDPDPVET 113
           +++ L+              ++       +   +  I P+L  E    + RA +P+PV+ 
Sbjct: 212 EKEMLDQDHMAIDDDETALHQVDDDDQDLEPPTKARIKPTLSVE----DERAANPEPVKP 267

Query: 112 NP--YAGKKMNRTTINPDPVHTPSLD 41
            P       ++   INP+ +  PS++
Sbjct: 268 PPEKKLASAIDLRAINPESMTPPSVE 293


>gb|AFW61968.1| hypothetical protein ZEAMMB73_167181 [Zea mays]
          Length = 616

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 14/246 (5%)
 Frame = -3

Query: 742 SVWEARMRVDAVNGGVKVFNAXXXXXXXXXXGMRVYRRLRRNQSD------SIASSRKRR 581
           SVWEARM++D V GGVKVF+A          G+RVYRRLRRNQS+      +  +++KRR
Sbjct: 33  SVWEARMKMDEVRGGVKVFSAGAADEPADEEGVRVYRRLRRNQSEGGGAGAADTAAKKRR 92

Query: 580 NWTAPQVEGRNPI----QLRKSREAKVLAIXXXXXXXXXXXGASVDIGIEDDGMKSFDDK 413
           +W A +     P+     LRKSR     A+            A+  +        S  +K
Sbjct: 93  SWKASK-----PVTAIGDLRKSRSDAAAAV------TTATTTATAVVARRAVARVSMPEK 141

Query: 412 EMDLPAEKGNSVEEEEKTISPVHEIPVLSPAIDKNHDSLVPLPDVEQRKQLNNWXXXXXX 233
           ++  PA    + E +E  +  VH+      A   +  ++   PD E     ++       
Sbjct: 142 KV-APAPAAAAGEVKEVVVVEVHK------AAAADAKNVARGPDEELDDDDDDHDDGAEV 194

Query: 232 XXXXXPKLGKKLNRTLILPSLDAEKKMMNHRAIDPDPVETNPYAGKKM----NRTTINPD 65
                  L +   +  I P+L  E++    RA +P+PV+  P  GKK+    +   +NP+
Sbjct: 195 DDDDEQDL-EPPTKAGIKPTLSVEEE----RATNPEPVKPPP-PGKKLASVVDLRAVNPE 248

Query: 64  PVHTPS 47
           P+ TP+
Sbjct: 249 PM-TPA 253


>ref|XP_002445424.1| hypothetical protein SORBIDRAFT_07g018020 [Sorghum bicolor]
           gi|241941774|gb|EES14919.1| hypothetical protein
           SORBIDRAFT_07g018020 [Sorghum bicolor]
          Length = 591

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
 Frame = -3

Query: 742 SVWEARMRVDAVNGGVKVFNAXXXXXXXXXXGMRVYRRLRRNQSD----------SIASS 593
           SVWEARM++D V GGVKVF+A          GMRVYRRLRRNQS+          S A++
Sbjct: 35  SVWEARMKMDEVKGGVKVFSAGAADEPADEEGMRVYRRLRRNQSEGNGTGAAGAASAAAA 94

Query: 592 RKRRNWTAPQ 563
           +KRR+W A +
Sbjct: 95  KKRRSWKASE 104


>gb|EEE68393.1| hypothetical protein OsJ_26729 [Oryza sativa Japonica Group]
          Length = 673

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 14/93 (15%)
 Frame = -3

Query: 742 SVWEARMRVDAVNGGVKVFNAXXXXXXXXXXGMRVYRRLRRNQSD----------SIASS 593
           SVWE RM++D V GGVKVF+A          G+RVYRRLRRNQSD          + A++
Sbjct: 32  SVWETRMKMDEVKGGVKVFSA--GGDDADEEGLRVYRRLRRNQSDGGGGASGSTNAAAAA 89

Query: 592 RKRRNWTAPQVEGRNPI----QLRKSREAKVLA 506
           +KRRNW A +     P+     LRKSR    +A
Sbjct: 90  KKRRNWKASE-----PVTAIGDLRKSRSDVAVA 117


>gb|EEC83262.1| hypothetical protein OsI_28591 [Oryza sativa Indica Group]
          Length = 740

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 14/93 (15%)
 Frame = -3

Query: 742 SVWEARMRVDAVNGGVKVFNAXXXXXXXXXXGMRVYRRLRRNQSD----------SIASS 593
           SVWE RM++D V GGVKVF+A          G+RVYRRLRRNQSD          + A++
Sbjct: 134 SVWETRMKMDEVKGGVKVFSA--GGDDADEEGLRVYRRLRRNQSDGGGGASGSTNAAAAA 191

Query: 592 RKRRNWTAPQVEGRNPI----QLRKSREAKVLA 506
           +KRRNW A +     P+     LRKSR    +A
Sbjct: 192 KKRRNWKASE-----PVTAIGDLRKSRSDVAVA 219


>ref|XP_003571613.1| PREDICTED: uncharacterized protein LOC100842453 [Brachypodium
           distachyon]
          Length = 620

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 75/283 (26%), Positives = 109/283 (38%), Gaps = 37/283 (13%)
 Frame = -3

Query: 742 SVWEARMRVDAVNGGVKVFNAXXXXXXXXXXGMRVYRRLRRNQSD-------------SI 602
           SVWE RM++D V GGVKVF+A          G+RVY RLRRNQSD             + 
Sbjct: 32  SVWETRMKMDEVKGGVKVFSA--AADDADEEGLRVYSRLRRNQSDAGGGAAAGTGTGAAA 89

Query: 601 ASSRKRRNWTAPQVEGRNPI----QLRKSREAKVLAIXXXXXXXXXXXGAS----VDIGI 446
           A+++KRRNW A +     P+     LRKSR     A             A+    V  G+
Sbjct: 90  AAAKKRRNWKASE-----PVTAIGDLRKSRSDAAAATGMVTARRAVATVAAPEKKVAAGV 144

Query: 445 ED--DGMKSFDDKEMDLPAEKGN----SVEEEEKTISPVHEIPVLSPAIDKNH-----DS 299
            +  + +    +K+   P +  N    + EEEE+    + E       +D++H     + 
Sbjct: 145 AEVKEVVVVEVEKKKPPPQQPENFDEETEEEEEEWEEELEEEEEEKEVLDQDHMAIDDEG 204

Query: 298 LVPLPDVEQ--RKQLNNWXXXXXXXXXXXPKLGKKLNRTLILPSLDAEKKMMNHRAIDPD 125
            VP  D+ Q   + L               +  +  N   +  +     K MN   I P 
Sbjct: 205 TVPATDLHQVDEQDLEPPTKKGVKPVAAALEDERAANPEPVKLAASVNLKAMNPEPITPP 264

Query: 124 PVETNP---YAGKKMNRTTINPDPVHTPSLDGAREMHEATPKN 5
           P E  P      +  N     P P    S    R + +  P N
Sbjct: 265 PAEKKPTPVIVHRVTNAEPTRPSPEKKSSPVNGRRIPKQEPLN 307


>dbj|BAK07265.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 606

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 13/86 (15%)
 Frame = -3

Query: 742 SVWEARMRVDAVNGGVKVFNAXXXXXXXXXXGMRVYRRLRRNQSD---------SIASSR 590
           SVWE RM +D V GGVKVF+           GMRVY RLRRNQSD         + A+++
Sbjct: 26  SVWETRMEMDEVKGGVKVFS--EGADDADEEGMRVYSRLRRNQSDGGGAGAGAGTAAAAK 83

Query: 589 KRRNWTAPQVEGRNPI----QLRKSR 524
           KRRNW A +     P+    +LRKSR
Sbjct: 84  KRRNWKASE-----PVTAIAELRKSR 104


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