BLASTX nr result
ID: Zingiber23_contig00028213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028213
(233 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT27241.1| Protein OSB3, chloroplastic/mitochondrial [Aegilo... 61 2e-07
dbj|BAK08277.1| predicted protein [Hordeum vulgare subsp. vulgare] 60 4e-07
dbj|BAJ91349.1| predicted protein [Hordeum vulgare subsp. vulgare] 60 4e-07
gb|EEC72157.1| hypothetical protein OsI_05193 [Oryza sativa Indi... 60 4e-07
dbj|BAD87869.1| unknown protein [Oryza sativa Japonica Group] 60 4e-07
ref|NP_001045397.2| Os01g0949200 [Oryza sativa Japonica Group] g... 60 4e-07
ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutr... 59 5e-07
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab... 59 5e-07
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop... 59 7e-07
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana] 59 7e-07
ref|XP_002459095.1| hypothetical protein SORBIDRAFT_03g045740 [S... 59 7e-07
ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis... 59 7e-07
emb|CBI17867.3| unnamed protein product [Vitis vinifera] 57 3e-06
gb|EOX96863.1| Plastid transcriptionally active 9, putative [The... 57 3e-06
ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, part... 56 4e-06
ref|XP_006646677.1| PREDICTED: protein OSB2, chloroplastic-like ... 56 6e-06
gb|EMJ15074.1| hypothetical protein PRUPE_ppa006796mg [Prunus pe... 56 6e-06
ref|XP_006305190.1| hypothetical protein CARUB_v10009555mg [Caps... 55 7e-06
ref|NP_001148836.1| single-strand binding protein [Zea mays] gi|... 55 7e-06
gb|ACF87480.1| unknown [Zea mays] gi|413933637|gb|AFW68188.1| si... 55 7e-06
>gb|EMT27241.1| Protein OSB3, chloroplastic/mitochondrial [Aegilops tauschii]
Length = 390
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = -3
Query: 210 ISKQKEYTFASSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQ 31
+SK +TF+ KA K + LW+D++ NPL+W DNR +K NG +P YPDFKN+
Sbjct: 164 VSKYPAHTFSDY---KAKQDKY--RTLWNDVLANPLNWTDNRAEKANGSKNPKYPDFKNK 218
Query: 30 KTYQVLWVN 4
+ LW++
Sbjct: 219 TADEALWLD 227
>dbj|BAK08277.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -3
Query: 210 ISKQKEYTFASSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQ 31
ISK TF+ KA K + LW+D++ NPL+W DNR +K NG +P YPDFKN+
Sbjct: 224 ISKYPANTFSGY---KAKLDKF--RTLWNDVLANPLNWTDNRAEKANGSKNPKYPDFKNK 278
Query: 30 KTYQVLWV 7
+ + LW+
Sbjct: 279 TSDEALWL 286
>dbj|BAJ91349.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -3
Query: 210 ISKQKEYTFASSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQ 31
ISK TF+ KA K + LW+D++ NPL+W DNR +K NG +P YPDFKN+
Sbjct: 224 ISKYPANTFSGY---KAKLDKF--RTLWNDVLANPLNWTDNRAEKANGSKNPKYPDFKNK 278
Query: 30 KTYQVLWV 7
+ + LW+
Sbjct: 279 TSDEALWL 286
>gb|EEC72157.1| hypothetical protein OsI_05193 [Oryza sativa Indica Group]
gi|222619870|gb|EEE56002.1| hypothetical protein
OsJ_04758 [Oryza sativa Japonica Group]
Length = 421
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -3
Query: 135 KLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
KLW+D+V NP DW DNR K NG I+ YPDFKN + + LW++
Sbjct: 256 KLWNDVVANPQDWTDNRPQKKNGSINAKYPDFKNNVSKEALWLD 299
>dbj|BAD87869.1| unknown protein [Oryza sativa Japonica Group]
Length = 395
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -3
Query: 135 KLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
KLW+D+V NP DW DNR K NG I+ YPDFKN + + LW++
Sbjct: 230 KLWNDVVANPQDWTDNRPQKKNGSINAKYPDFKNNVSKEALWLD 273
>ref|NP_001045397.2| Os01g0949200 [Oryza sativa Japonica Group]
gi|57900456|dbj|BAD87868.1| unknown protein [Oryza
sativa Japonica Group] gi|255674072|dbj|BAF07311.2|
Os01g0949200 [Oryza sativa Japonica Group]
Length = 309
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -3
Query: 135 KLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
KLW+D+V NP DW DNR K NG I+ YPDFKN + + LW++
Sbjct: 144 KLWNDVVANPQDWTDNRPQKKNGSINAKYPDFKNNVSKEALWLD 187
>ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum]
gi|557115080|gb|ESQ55363.1| hypothetical protein
EUTSA_v10025547mg [Eutrema salsugineum]
Length = 360
Score = 59.3 bits (142), Expect = 5e-07
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = -3
Query: 129 WDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVNR 1
W+ L+ NP +W+D+RE+K NGL+ P +PDFKN+ T LW+N+
Sbjct: 225 WNHLIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWLNK 267
>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/73 (36%), Positives = 46/73 (63%)
Frame = -3
Query: 219 EAGISKQKEYTFASSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDF 40
E+GI KQ + ++A+ S W+ L+ NP +W+D+RE+K+NGL+ P +PDF
Sbjct: 209 ESGIKKQPGIAKKDIVIDEASDS-------WNHLIENPKEWWDHRENKVNGLVKPRHPDF 261
Query: 39 KNQKTYQVLWVNR 1
K++ + LW+N+
Sbjct: 262 KSKDSSLSLWLNK 274
>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
gi|332658861|gb|AEE84261.1| plastid transcriptionally
active 9 [Arabidopsis thaliana]
Length = 371
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/73 (36%), Positives = 46/73 (63%)
Frame = -3
Query: 219 EAGISKQKEYTFASSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDF 40
E+GI KQ + ++A+ S W+ L+ NP +W+D+RE+K+NGL+ P +PDF
Sbjct: 214 ESGIKKQPGIAKQDIVIDEASDS-------WNHLIENPKEWWDHRENKVNGLVKPRHPDF 266
Query: 39 KNQKTYQVLWVNR 1
K++ + LW+N+
Sbjct: 267 KSKDSSFSLWLNK 279
>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/73 (36%), Positives = 46/73 (63%)
Frame = -3
Query: 219 EAGISKQKEYTFASSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDF 40
E+GI KQ + ++A+ S W+ L+ NP +W+D+RE+K+NGL+ P +PDF
Sbjct: 214 ESGIKKQPARAKQDIVIDEASDS-------WNHLIENPKEWWDHRENKVNGLVKPRHPDF 266
Query: 39 KNQKTYQVLWVNR 1
K++ + LW+N+
Sbjct: 267 KSKDSSFSLWLNK 279
>ref|XP_002459095.1| hypothetical protein SORBIDRAFT_03g045740 [Sorghum bicolor]
gi|241931070|gb|EES04215.1| hypothetical protein
SORBIDRAFT_03g045740 [Sorghum bicolor]
Length = 383
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = -3
Query: 180 SSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
S +NKA+ KLW+D++ +P DW DNR K NGL P YPDFK++ + + LW++
Sbjct: 199 SGYRNKADKIN----KLWNDVISHPQDWIDNRPQKKNGLRSPKYPDFKSKVSDEALWLD 253
>ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName:
Full=Protein OSB2, chloroplastic; AltName:
Full=Organellar single-stranded DNA-binding protein 2;
AltName: Full=Protein FLORAL ABSCISSION ASSOCIATED;
AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE
9; Flags: Precursor gi|2827655|emb|CAA16609.1|
hypothetical protein [Arabidopsis thaliana]
gi|7268796|emb|CAB79001.1| hypothetical protein
[Arabidopsis thaliana] gi|111074390|gb|ABH04568.1|
At4g20010 [Arabidopsis thaliana]
gi|332658860|gb|AEE84260.1| plastid transcriptionally
active 9 [Arabidopsis thaliana]
Length = 371
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/73 (36%), Positives = 46/73 (63%)
Frame = -3
Query: 219 EAGISKQKEYTFASSIKNKANASKVYSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDF 40
E+GI KQ + ++A+ S W+ L+ NP +W+D+RE+K+NGL+ P +PDF
Sbjct: 214 ESGIKKQPARAKQDIVIDEASDS-------WNHLIENPKEWWDHRENKVNGLVKPRHPDF 266
Query: 39 KNQKTYQVLWVNR 1
K++ + LW+N+
Sbjct: 267 KSKDSSFSLWLNK 279
>emb|CBI17867.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 57.0 bits (136), Expect = 3e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = -3
Query: 132 LWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
LW DL++NP W DNR+DKLNG + P +PDFK + LW++
Sbjct: 69 LWRDLIMNPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLD 111
>gb|EOX96863.1| Plastid transcriptionally active 9, putative [Theobroma cacao]
Length = 344
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -3
Query: 129 WDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWV 7
W DLV NP W+DNR DK NG I+ YPDFK+++T + LW+
Sbjct: 274 WKDLVENPNKWWDNRLDKFNGKINERYPDFKHKETGEALWL 314
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -3
Query: 129 WDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
W DL+ NP +W D RE+KLNGL+ P YPDFK++ + LW++
Sbjct: 199 WRDLLDNPKEWQDYRENKLNGLVKPKYPDFKHKDSGLALWLD 240
>ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, partial [Capsella rubella]
gi|482551352|gb|EOA15545.1| hypothetical protein
CARUB_v10004988mg, partial [Capsella rubella]
Length = 394
Score = 56.2 bits (134), Expect = 4e-06
Identities = 20/43 (46%), Positives = 34/43 (79%)
Frame = -3
Query: 129 WDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVNR 1
W+ L+ NP +W+D+RE+K+NGL+ P +PDFK++ + LW+N+
Sbjct: 260 WNRLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNK 302
>ref|XP_006646677.1| PREDICTED: protein OSB2, chloroplastic-like [Oryza brachyantha]
Length = 334
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -3
Query: 135 KLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
KLW+D++ NP DW DNR K NG H YPDFKN + + LW++
Sbjct: 164 KLWNDVLANPQDWTDNRAGKKNGSKHAKYPDFKNIVSKEGLWLD 207
>gb|EMJ15074.1| hypothetical protein PRUPE_ppa006796mg [Prunus persica]
Length = 395
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -3
Query: 129 WDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVNR 1
W DL+ NP W D R+ KLNGL++PN+PDFK++ LW+N+
Sbjct: 261 WRDLLDNPKQWRDYRKPKLNGLVNPNHPDFKSKDGSHALWLNK 303
>ref|XP_006305190.1| hypothetical protein CARUB_v10009555mg [Capsella rubella]
gi|482573901|gb|EOA38088.1| hypothetical protein
CARUB_v10009555mg [Capsella rubella]
Length = 356
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = -3
Query: 174 IKNKANASKV--YSQKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVNR 1
+K+ A+ K + W DLV P WFD RE K NG ++PN+PDFK + + LW+N+
Sbjct: 204 LKHSASVQKGSGFGTNRWADLVDYPDKWFDYRESKQNGSVNPNHPDFKKKDGSEALWINK 263
>ref|NP_001148836.1| single-strand binding protein [Zea mays]
gi|195622496|gb|ACG33078.1| single-strand binding
protein [Zea mays]
Length = 300
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = -3
Query: 171 KNKANASKVYS-QKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
KN+ N S S ++LW NPLDW+DNR +K N P YPDFK+++T + LWV+
Sbjct: 203 KNRDNMSSSRSTEELWQVFFANPLDWWDNRTNKKN----PRYPDFKHKQTGEALWVD 255
>gb|ACF87480.1| unknown [Zea mays] gi|413933637|gb|AFW68188.1| single-strand
binding protein [Zea mays]
Length = 300
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = -3
Query: 171 KNKANASKVYS-QKLWDDLVLNPLDWFDNREDKLNGLIHPNYPDFKNQKTYQVLWVN 4
KN+ N S S ++LW NPLDW+DNR +K N P YPDFK+++T + LWV+
Sbjct: 203 KNRDNMSSSRSTEELWQVFFANPLDWWDNRTNKKN----PRYPDFKHKQTGEALWVD 255