BLASTX nr result
ID: Zingiber23_contig00028211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028211
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC21425.1| hypothetical protein L484_011867 [Morus notabilis] 52 2e-08
ref|XP_004307962.1| PREDICTED: 50S ribosomal protein L9-like [Fr... 52 7e-08
gb|EMJ20438.1| hypothetical protein PRUPE_ppa017494mg [Prunus pe... 52 9e-08
ref|XP_006281066.1| hypothetical protein CARUB_v10027089mg [Caps... 50 2e-07
ref|NP_200119.1| ribosomal protein L9/RNase H1 [Arabidopsis thal... 50 2e-07
ref|XP_002864216.1| ribosomal protein L9 family protein [Arabido... 50 2e-07
ref|XP_004146229.1| PREDICTED: 50S ribosomal protein L9-like [Cu... 50 2e-07
ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis v... 49 3e-07
ref|XP_006401748.1| hypothetical protein EUTSA_v10014627mg [Eutr... 49 5e-07
ref|XP_006377119.1| hypothetical protein POPTR_0012s15210g [Popu... 51 6e-07
ref|XP_002445960.1| hypothetical protein SORBIDRAFT_07g028700 [S... 46 1e-06
dbj|BAK03075.1| predicted protein [Hordeum vulgare subsp. vulgare] 48 1e-06
dbj|BAK02532.1| predicted protein [Hordeum vulgare subsp. vulgare] 48 1e-06
ref|XP_003557277.1| PREDICTED: 50S ribosomal protein L9-like [Br... 47 2e-06
ref|XP_006377023.1| hypothetical protein POPTR_0012s12200g [Popu... 51 2e-06
ref|XP_006387137.1| hypothetical protein POPTR_1727s00200g [Popu... 51 2e-06
ref|XP_002332160.1| predicted protein [Populus trichocarpa] 51 2e-06
ref|XP_002317788.1| hypothetical protein POPTR_0012s02440g [Popu... 51 2e-06
ref|XP_002336372.1| predicted protein [Populus trichocarpa] 51 2e-06
ref|XP_006827000.1| hypothetical protein AMTR_s00010p00212700 [A... 51 2e-06
>gb|EXC21425.1| hypothetical protein L484_011867 [Morus notabilis]
Length = 1349
Score = 51.6 bits (122), Expect(2) = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
GK G TVKVAPGHFRNH LMPKLLAV NIEK+A+
Sbjct: 835 GKAGETVKVAPGHFRNH-----LMPKLLAVPNIEKFAY 867
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
NP LF +QG+R RK EVIL T
Sbjct: 809 NPLLFVSQGVRHRKLEVILTT 829
>ref|XP_004307962.1| PREDICTED: 50S ribosomal protein L9-like [Fragaria vesca subsp.
vesca]
Length = 221
Score = 52.0 bits (123), Expect(2) = 7e-08
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
GK G TVKVAPGHFRNH LMPKLLAV NI+KYA+
Sbjct: 54 GKAGETVKVAPGHFRNH-----LMPKLLAVPNIDKYAY 86
Score = 30.0 bits (66), Expect(2) = 7e-08
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
NP +F QG+R RK EVIL T
Sbjct: 28 NPLVFACQGVRHRKLEVILTT 48
>gb|EMJ20438.1| hypothetical protein PRUPE_ppa017494mg [Prunus persica]
Length = 223
Score = 52.4 bits (124), Expect(2) = 9e-08
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
S + GK G TVKVAPGHFRNH LMPKLLAV NI+KYA+
Sbjct: 51 SVEKLGKAGQTVKVAPGHFRNH-----LMPKLLAVPNIDKYAY 88
Score = 29.3 bits (64), Expect(2) = 9e-08
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
NP L+ QG+R RK EVIL T
Sbjct: 30 NPLLYACQGVRYRKLEVILTT 50
>ref|XP_006281066.1| hypothetical protein CARUB_v10027089mg [Capsella rubella]
gi|482549770|gb|EOA13964.1| hypothetical protein
CARUB_v10027089mg [Capsella rubella]
Length = 221
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
GK G TVKVAPG+FRNH LMPKLLAV NI+KYA+
Sbjct: 56 GKAGETVKVAPGYFRNH-----LMPKLLAVPNIDKYAY 88
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 106 ITNPFLFFAQGIRRRKHEVILATLGKTRYGEGG 204
I +P LF QG+R RK EVIL T G + G+ G
Sbjct: 28 IHHPLLFACQGVRYRKLEVILTT-GIEKLGKAG 59
>ref|NP_200119.1| ribosomal protein L9/RNase H1 [Arabidopsis thaliana]
gi|8809596|dbj|BAA97147.1| unnamed protein product
[Arabidopsis thaliana] gi|27754507|gb|AAO22701.1|
unknown protein [Arabidopsis thaliana]
gi|28393965|gb|AAO42390.1| unknown protein [Arabidopsis
thaliana] gi|332008917|gb|AED96300.1| ribosomal protein
L9/RNase H1 [Arabidopsis thaliana]
Length = 221
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
GK G TVKVAPG+FRNH LMPKLLAV NI+KYA+
Sbjct: 56 GKAGETVKVAPGYFRNH-----LMPKLLAVPNIDKYAY 88
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 106 ITNPFLFFAQGIRRRKHEVILATLGKTRYGEGG 204
I +P LF QG+R RK EVIL T G + G+ G
Sbjct: 28 IHHPLLFACQGVRYRKLEVILTT-GIEKLGKAG 59
>ref|XP_002864216.1| ribosomal protein L9 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297310051|gb|EFH40475.1| ribosomal protein L9
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 221
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
GK G TVKVAPG+FRNH LMPKLLAV NI+KYA+
Sbjct: 56 GKAGETVKVAPGYFRNH-----LMPKLLAVPNIDKYAY 88
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 106 ITNPFLFFAQGIRRRKHEVILATLGKTRYGEGG 204
I +P LF QG+R RK EVIL T G + G+ G
Sbjct: 28 IHHPLLFACQGVRYRKLEVILTT-GIEKLGKAG 59
>ref|XP_004146229.1| PREDICTED: 50S ribosomal protein L9-like [Cucumis sativus]
gi|449517603|ref|XP_004165835.1| PREDICTED: 50S
ribosomal protein L9-like [Cucumis sativus]
Length = 218
Score = 50.4 bits (119), Expect(2) = 2e-07
Identities = 28/43 (65%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
S + GK G TVKVAPG+FRNH LMPK+LAV NIEKYA+
Sbjct: 49 SIEKLGKAGETVKVAPGYFRNH-----LMPKILAVPNIEKYAY 86
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 94 PLANITNPFLFFAQGIRRRKHEVILAT 174
P + P LF QG+R RK EVIL T
Sbjct: 22 PSDQMMQPLLFSGQGVRHRKLEVILTT 48
>ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis vinifera]
gi|302143920|emb|CBI23025.3| unnamed protein product
[Vitis vinifera]
Length = 217
Score = 49.3 bits (116), Expect(2) = 3e-07
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
GK G TVKVAPG+FRNH LMPKLLAV NIEK+A+
Sbjct: 54 GKAGETVKVAPGYFRNH-----LMPKLLAVPNIEKFAY 86
Score = 30.8 bits (68), Expect(2) = 3e-07
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 106 ITNPFLFFAQGIRRRKHEVILAT 174
+ NP L+ QG+R RK EVIL T
Sbjct: 26 VVNPLLYVCQGVRYRKLEVILTT 48
>ref|XP_006401748.1| hypothetical protein EUTSA_v10014627mg [Eutrema salsugineum]
gi|557102838|gb|ESQ43201.1| hypothetical protein
EUTSA_v10014627mg [Eutrema salsugineum]
Length = 220
Score = 48.5 bits (114), Expect(2) = 5e-07
Identities = 27/37 (72%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
GK G TVKVAPG+FRNH LMPKLLAV NI+KYA
Sbjct: 56 GKAGETVKVAPGYFRNH-----LMPKLLAVPNIDKYA 87
Score = 30.8 bits (68), Expect(2) = 5e-07
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 106 ITNPFLFFAQGIRRRKHEVILATLGKTRYGEGG 204
I +P LF QG+R RK EVIL T G + G+ G
Sbjct: 28 IHHPLLFACQGVRYRKLEVILTT-GIEKLGKAG 59
>ref|XP_006377119.1| hypothetical protein POPTR_0012s15210g [Populus trichocarpa]
gi|550327167|gb|ERP54916.1| hypothetical protein
POPTR_0012s15210g [Populus trichocarpa]
Length = 333
Score = 50.8 bits (120), Expect(2) = 6e-07
Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
S + GK G TVKVAPGHFRNH LMPKLLAV NIEK+A
Sbjct: 164 SIEKLGKAGQTVKVAPGHFRNH-----LMPKLLAVPNIEKFA 200
Score = 28.1 bits (61), Expect(2) = 6e-07
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
NP L+ QG+R +K EVIL T
Sbjct: 143 NPLLYACQGVRYKKLEVILTT 163
>ref|XP_002445960.1| hypothetical protein SORBIDRAFT_07g028700 [Sorghum bicolor]
gi|241942310|gb|EES15455.1| hypothetical protein
SORBIDRAFT_07g028700 [Sorghum bicolor]
Length = 203
Score = 45.8 bits (107), Expect(2) = 1e-06
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
GK G VKVAPGHFRNH LMPK+LAV N++K+A
Sbjct: 44 GKTGDVVKVAPGHFRNH-----LMPKMLAVPNLDKFA 75
Score = 32.3 bits (72), Expect(2) = 1e-06
Identities = 18/29 (62%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT----LGKT 186
NPFLF G+R RK EVIL T LGKT
Sbjct: 18 NPFLFSGHGLRYRKLEVILTTTIDKLGKT 46
>dbj|BAK03075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 26/37 (70%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
GK G TVKVAPGHFRN YLMPK+LAV NI+K+A
Sbjct: 46 GKAGETVKVAPGHFRN-----YLMPKMLAVPNIDKFA 77
Score = 29.6 bits (65), Expect(2) = 1e-06
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 100 ANITNPFLFFAQGIRRRKHEVILAT 174
A NP LF A G+R RK EVIL T
Sbjct: 16 AAAANPVLFSAHGLRYRKLEVILTT 40
>dbj|BAK02532.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 26/37 (70%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
GK G TVKVAPGHFRN YLMPK+LAV NI+K+A
Sbjct: 46 GKAGETVKVAPGHFRN-----YLMPKMLAVPNIDKFA 77
Score = 29.6 bits (65), Expect(2) = 1e-06
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 100 ANITNPFLFFAQGIRRRKHEVILAT 174
A NP LF A G+R RK EVIL T
Sbjct: 16 AAAANPVLFSAHGLRYRKLEVILTT 40
>ref|XP_003557277.1| PREDICTED: 50S ribosomal protein L9-like [Brachypodium distachyon]
Length = 202
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
GK G TV+VAPGHFRNH LMPK+LAV NI+K+A
Sbjct: 43 GKAGETVQVAPGHFRNH-----LMPKMLAVPNIDKFA 74
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 100 ANITNPFLFFAQGIRRRKHEVILAT 174
A NP LF A G+R RK EVIL T
Sbjct: 13 ATAANPVLFSAHGLRYRKLEVILTT 37
>ref|XP_006377023.1| hypothetical protein POPTR_0012s12200g [Populus trichocarpa]
gi|550326961|gb|ERP54820.1| hypothetical protein
POPTR_0012s12200g [Populus trichocarpa]
Length = 219
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
S + GK G TVKVAPGHFRNH LMPKLLAV NIEK+A
Sbjct: 50 SIEKLGKAGQTVKVAPGHFRNH-----LMPKLLAVPNIEKFA 86
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
+P L+ QG+R +K EVIL T
Sbjct: 29 HPLLYACQGVRYKKLEVILTT 49
>ref|XP_006387137.1| hypothetical protein POPTR_1727s00200g [Populus trichocarpa]
gi|566253043|ref|XP_006387138.1| hypothetical protein
POPTR_1727s00200g [Populus trichocarpa]
gi|550305208|gb|ERP46051.1| hypothetical protein
POPTR_1727s00200g [Populus trichocarpa]
gi|550305209|gb|ERP46052.1| hypothetical protein
POPTR_1727s00200g [Populus trichocarpa]
Length = 219
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
S + GK G TVKVAPGHFRNH LMPKLLAV NIEK+A
Sbjct: 50 SIEKLGKAGQTVKVAPGHFRNH-----LMPKLLAVPNIEKFA 86
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
+P L+ QG+R +K EVIL T
Sbjct: 29 HPLLYACQGVRYKKLEVILTT 49
>ref|XP_002332160.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
S + GK G TVKVAPGHFRNH LMPKLLAV NIEK+A
Sbjct: 50 SIEKLGKAGQTVKVAPGHFRNH-----LMPKLLAVPNIEKFA 86
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
+P L+ QG+R +K EVIL T
Sbjct: 29 HPLLYACQGVRYKKLEVILTT 49
>ref|XP_002317788.1| hypothetical protein POPTR_0012s02440g [Populus trichocarpa]
gi|222858461|gb|EEE96008.1| hypothetical protein
POPTR_0012s02440g [Populus trichocarpa]
Length = 219
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
S + GK G TVKVAPGHFRNH LMPKLLAV NIEK+A
Sbjct: 50 SIEKLGKAGQTVKVAPGHFRNH-----LMPKLLAVPNIEKFA 86
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
+P L+ QG+R +K EVIL T
Sbjct: 29 HPLLYACQGVRYKKLEVILTT 49
>ref|XP_002336372.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 164 SSPRWGKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYA 286
S + GK G TVKVAPGHFRNH LMPKLLAV NIEK+A
Sbjct: 50 SIEKLGKAGQTVKVAPGHFRNH-----LMPKLLAVPNIEKFA 86
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 112 NPFLFFAQGIRRRKHEVILAT 174
+P L+ QG+R +K EVIL T
Sbjct: 29 HPLLYACQGVRYKKLEVILTT 49
>ref|XP_006827000.1| hypothetical protein AMTR_s00010p00212700 [Amborella trichopoda]
gi|548831429|gb|ERM94237.1| hypothetical protein
AMTR_s00010p00212700 [Amborella trichopoda]
Length = 202
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 GKLG-TVKVAPGHFRNHLMPGYLMPKLLAVTNIEKYAF 289
GK G TVKVAPG+FRNH LMPKLLAV NIEKYA+
Sbjct: 54 GKAGETVKVAPGYFRNH-----LMPKLLAVPNIEKYAY 86
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 115 PFLFFAQGIRRRKHEVILAT 174
P F QG+R RK EVIL T
Sbjct: 29 PSFFVGQGVRYRKLEVILTT 48