BLASTX nr result

ID: Zingiber23_contig00028152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00028152
         (380 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [S...    58   1e-06

>ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
           gi|241946865|gb|EES20010.1| hypothetical protein
           SORBIDRAFT_09g029730 [Sorghum bicolor]
          Length = 406

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 46/116 (39%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
 Frame = -1

Query: 302 MLSLTCPSV--------DLSQSGCLGRRRVRPLWRSSAARSVGARCMVS---TTQDDVRS 156
           MLSL+CP V        DL Q     R R    W S   R     C V+   T Q    +
Sbjct: 1   MLSLSCPGVSSMSKTALDLGQLVAPCRSRCTGAWASPRRRRTPCVCFVASLATAQPGTAA 60

Query: 155 GGVATSVKPAVXXXXXXXXXS-----LLEVVSADIKRLNENLKALIGAENPVLVSA 3
             V     PAV               LLEVVS D+  LN NLK+L+GAENPVLVSA
Sbjct: 61  VDVPARTIPAVTTASAPAPERTSVSSLLEVVSDDLLNLNNNLKSLVGAENPVLVSA 116


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