BLASTX nr result
ID: Zingiber23_contig00028082
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028082
(214 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003579362.1| PREDICTED: uncharacterized protein LOC100823... 69 5e-10
gb|EMT04979.1| DNA polymerase I [Aegilops tauschii] 67 2e-09
ref|XP_004295805.1| PREDICTED: uncharacterized protein LOC101293... 64 2e-08
ref|XP_006653805.1| PREDICTED: uncharacterized protein LOC102704... 64 2e-08
gb|EEC78098.1| hypothetical protein OsI_17597 [Oryza sativa Indi... 64 2e-08
gb|EOY12453.1| Polymerase gamma 2 isoform 4 [Theobroma cacao] 64 3e-08
gb|EOY12452.1| Polymerase gamma 2 isoform 3 [Theobroma cacao] 64 3e-08
gb|EOY12451.1| Polymerase gamma 2 isoform 2 [Theobroma cacao] 64 3e-08
gb|EOY12450.1| Polymerase gamma 2 isoform 1 [Theobroma cacao] 64 3e-08
ref|XP_004976982.1| PREDICTED: uncharacterized protein LOC101784... 63 4e-08
ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797... 63 4e-08
ref|XP_002447185.1| hypothetical protein SORBIDRAFT_06g030120 [S... 63 4e-08
ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|3555... 63 5e-08
ref|XP_006366051.1| PREDICTED: uncharacterized protein LOC102581... 62 1e-07
ref|XP_004244135.1| PREDICTED: uncharacterized protein LOC101252... 62 1e-07
ref|XP_004491363.1| PREDICTED: uncharacterized protein LOC101490... 61 1e-07
gb|EEE61770.1| hypothetical protein OsJ_16332 [Oryza sativa Japo... 61 2e-07
ref|NP_001054024.1| Os04g0637400 [Oryza sativa Japonica Group] g... 61 2e-07
emb|CAE04166.3| OSJNBb0034I13.15 [Oryza sativa Japonica Group] 61 2e-07
gb|ESW14254.1| hypothetical protein PHAVU_008G2657000g, partial ... 60 2e-07
>ref|XP_003579362.1| PREDICTED: uncharacterized protein LOC100823216 [Brachypodium
distachyon]
Length = 1031
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Frame = -2
Query: 213 NDFDEGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL--------NDG 58
N EGKK+PK+RTI L I E L+TD++TASGWPSVSG+AL+ AG L +D
Sbjct: 596 NTVTEGKKAPKYRTIELFSIVEDLKTDIFTASGWPSVSGDALRNLAGKLKTDLAYPMDDA 655
Query: 57 YKDQSGSRKDILVDQTE 7
D+ GS +I D E
Sbjct: 656 EGDRYGSDSEISEDDVE 672
>gb|EMT04979.1| DNA polymerase I [Aegilops tauschii]
Length = 1177
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Frame = -2
Query: 213 NDFDEGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL-------NDGY 55
N EGKK+PK+RTI + I EGL+ +V+TASGWPSVSG+AL+ AG L D
Sbjct: 700 NTVTEGKKAPKYRTIEICSIVEGLKPEVFTASGWPSVSGDALRSLAGKLKTDLYTTEDAE 759
Query: 54 KDQSGSRKDILVDQTE 7
D+ S +I VD E
Sbjct: 760 DDEYVSDSEISVDDVE 775
>ref|XP_004295805.1| PREDICTED: uncharacterized protein LOC101293674 [Fragaria vesca
subsp. vesca]
Length = 1072
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = -2
Query: 204 DEGKKS-PKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
++GK + PKFR I LH IG L T++YTA+GWPSVSG+ALK+ AG ++ Y
Sbjct: 630 EDGKNTAPKFRNITLHTIGVNLLTEIYTATGWPSVSGDALKILAGKISSEY 680
>ref|XP_006653805.1| PREDICTED: uncharacterized protein LOC102704056 [Oryza brachyantha]
Length = 1066
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = -2
Query: 201 EGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL 67
EGKK+PK+RTI L I E L+TD++TASGWPSVSG+AL+ AG L
Sbjct: 635 EGKKTPKYRTIELFSIVEDLKTDLFTASGWPSVSGDALRSLAGKL 679
>gb|EEC78098.1| hypothetical protein OsI_17597 [Oryza sativa Indica Group]
Length = 1032
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = -2
Query: 201 EGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL 67
EGKK+PK+RTI L I E L+TD++TASGWPSVSG+AL+ AG L
Sbjct: 602 EGKKTPKYRTIELFSIVEDLKTDLFTASGWPSVSGDALRSLAGKL 646
>gb|EOY12453.1| Polymerase gamma 2 isoform 4 [Theobroma cacao]
Length = 1160
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -2
Query: 204 DEGKKSP-KFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
+EGKK P KFR+I LH +G L +VYTA+GWPSVSGNALK AG ++ Y
Sbjct: 728 EEGKKVPTKFRSIKLHSLGVELPAEVYTATGWPSVSGNALKTLAGKVSAEY 778
>gb|EOY12452.1| Polymerase gamma 2 isoform 3 [Theobroma cacao]
Length = 1019
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -2
Query: 204 DEGKKSP-KFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
+EGKK P KFR+I LH +G L +VYTA+GWPSVSGNALK AG ++ Y
Sbjct: 670 EEGKKVPTKFRSIKLHSLGVELPAEVYTATGWPSVSGNALKTLAGKVSAEY 720
>gb|EOY12451.1| Polymerase gamma 2 isoform 2 [Theobroma cacao]
Length = 1072
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -2
Query: 204 DEGKKSP-KFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
+EGKK P KFR+I LH +G L +VYTA+GWPSVSGNALK AG ++ Y
Sbjct: 641 EEGKKVPTKFRSIKLHSLGVELPAEVYTATGWPSVSGNALKTLAGKVSAEY 691
>gb|EOY12450.1| Polymerase gamma 2 isoform 1 [Theobroma cacao]
Length = 1159
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -2
Query: 204 DEGKKSP-KFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
+EGKK P KFR+I LH +G L +VYTA+GWPSVSGNALK AG ++ Y
Sbjct: 728 EEGKKVPTKFRSIKLHSLGVELPAEVYTATGWPSVSGNALKTLAGKVSAEY 778
>ref|XP_004976982.1| PREDICTED: uncharacterized protein LOC101784259 [Setaria italica]
Length = 1031
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 8/67 (11%)
Frame = -2
Query: 201 EGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL--------NDGYKDQ 46
EGKK PK+RTI L I E L+TD++TASGWPSVSG+AL+ AG + +D D+
Sbjct: 600 EGKKVPKYRTIELFSIVEDLKTDIFTASGWPSVSGDALRNLAGKVPSDLVYTTDDVNDDE 659
Query: 45 SGSRKDI 25
GS +I
Sbjct: 660 CGSDSEI 666
>ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797016 [Glycine max]
Length = 1077
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -2
Query: 213 NDFDEGKKSPK-FRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
N +EGKK+PK FR I L +G L+T++YTA+GWPSVSG+ALK AG+++ Y
Sbjct: 636 NVIEEGKKAPKKFRDIKLTSLGYNLETEMYTATGWPSVSGDALKALAGSISADY 689
>ref|XP_002447185.1| hypothetical protein SORBIDRAFT_06g030120 [Sorghum bicolor]
gi|241938368|gb|EES11513.1| hypothetical protein
SORBIDRAFT_06g030120 [Sorghum bicolor]
Length = 992
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -2
Query: 201 EGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAG----NLNDGYKDQSGSR 34
EGKK PK+RTI L I E L+TD++TASGWPSVSG+AL+ AG +L D+ GS
Sbjct: 597 EGKKVPKYRTIELFNIVEDLKTDIFTASGWPSVSGDALRNLAGKVPSDLVYSTDDECGSH 656
Query: 33 KDI 25
+I
Sbjct: 657 SEI 659
>ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|355518821|gb|AET00445.1|
DNA polymerase [Medicago truncatula]
Length = 1084
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/51 (56%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -2
Query: 204 DEGKKSPK-FRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
+EGKK+PK FR + + +G L+T++YTASGWPSVSG+ALKV AGN++ +
Sbjct: 643 EEGKKAPKKFRDMKVKSLGYTLKTEMYTASGWPSVSGDALKVLAGNISSDF 693
>ref|XP_006366051.1| PREDICTED: uncharacterized protein LOC102581629 [Solanum tuberosum]
Length = 1119
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Frame = -2
Query: 204 DEGKKSP-KFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLN---DGYKDQSGS 37
+EGKK+P KFR I LH+I + + T+++TASGWPSVSG+ALK AG ++ D + + G+
Sbjct: 677 EEGKKAPTKFRKIHLHRICDPINTEIFTASGWPSVSGDALKALAGKVSADFDIFDEVDGN 736
Query: 36 RKDI 25
+++
Sbjct: 737 AEEV 740
>ref|XP_004244135.1| PREDICTED: uncharacterized protein LOC101252794 [Solanum
lycopersicum]
Length = 1119
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Frame = -2
Query: 204 DEGKKSP-KFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLN---DGYKDQSGS 37
+EGKK+P KFR I LH+I + + T+++TASGWPSVSG+ALK AG ++ D + + G+
Sbjct: 677 EEGKKAPTKFRKIHLHRICDPINTEIFTASGWPSVSGDALKALAGKVSADFDIFDEVDGN 736
Query: 36 RKDI 25
+++
Sbjct: 737 AEEV 740
>ref|XP_004491363.1| PREDICTED: uncharacterized protein LOC101490997 [Cicer arietinum]
Length = 1082
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -2
Query: 204 DEGKKSPK-FRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
+EGKK PK FR + + +G L+T++YTASGWPSVSG+ALK+ AGN++ +
Sbjct: 648 EEGKKVPKKFRDMKVTSLGYKLETEMYTASGWPSVSGDALKILAGNISSDF 698
>gb|EEE61770.1| hypothetical protein OsJ_16332 [Oryza sativa Japonica Group]
Length = 885
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 201 EGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL 67
EGKK+PK+ TI L I E L+TD++TASGWPSVSG+AL+ AG L
Sbjct: 455 EGKKTPKYCTIELFSIVEDLKTDLFTASGWPSVSGDALRSLAGKL 499
>ref|NP_001054024.1| Os04g0637400 [Oryza sativa Japonica Group]
gi|113565595|dbj|BAF15938.1| Os04g0637400, partial
[Oryza sativa Japonica Group]
Length = 560
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 201 EGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL 67
EGKK+PK+ TI L I E L+TD++TASGWPSVSG+AL+ AG L
Sbjct: 130 EGKKTPKYCTIELFSIVEDLKTDLFTASGWPSVSGDALRSLAGKL 174
>emb|CAE04166.3| OSJNBb0034I13.15 [Oryza sativa Japonica Group]
Length = 1000
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 201 EGKKSPKFRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNL 67
EGKK+PK+ TI L I E L+TD++TASGWPSVSG+AL+ AG L
Sbjct: 602 EGKKTPKYCTIELFSIVEDLKTDLFTASGWPSVSGDALRSLAGKL 646
>gb|ESW14254.1| hypothetical protein PHAVU_008G2657000g, partial [Phaseolus
vulgaris]
Length = 1013
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = -2
Query: 213 NDFDEGKKSPK-FRTILLHKIGEGLQTDVYTASGWPSVSGNALKVFAGNLNDGY 55
N +EGKK+PK FR I + +G L+T++YTA+GWPSVSG+ALK AG ++ Y
Sbjct: 656 NVVEEGKKAPKKFRDIKVTSLGYDLKTEMYTATGWPSVSGDALKAMAGKISADY 709