BLASTX nr result
ID: Zingiber23_contig00028078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028078
(521 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001048451.2| Os02g0806900 [Oryza sativa Japonica Group] g... 65 1e-08
gb|EAY87933.1| hypothetical protein OsI_09357 [Oryza sativa Indi... 65 1e-08
gb|AAK98692.1|AC069158_4 Putative serine palmitoyltransferase [O... 65 1e-08
ref|XP_006648080.1| PREDICTED: long chain base biosynthesis prot... 63 4e-08
ref|XP_006411997.1| hypothetical protein EUTSA_v10025064mg [Eutr... 63 4e-08
gb|EEE50683.1| hypothetical protein OsJ_30932 [Oryza sativa Japo... 62 1e-07
gb|EEC68106.1| hypothetical protein OsI_36008 [Oryza sativa Indi... 62 1e-07
ref|NP_001064272.1| Os10g0189600 [Oryza sativa Japonica Group] g... 62 1e-07
gb|AAX95571.1| hypothetical protein [Oryza sativa Japonica Group] 62 1e-07
gb|AAX95555.1| expressed protein [Oryza sativa Japonica Group] 62 1e-07
gb|AFK40647.1| unknown [Medicago truncatula] 61 1e-07
ref|XP_003615764.1| Serine palmitoyltransferase [Medicago trunca... 61 1e-07
gb|ACJ85561.1| unknown [Medicago truncatula] gi|388499306|gb|AFK... 61 1e-07
gb|AFK45471.1| unknown [Lotus japonicus] 61 2e-07
gb|ACH61906.1| serine palmitoyltransferase long chain base subun... 60 2e-07
ref|NP_568005.1| serine palmitoyltransferase [Arabidopsis thalia... 60 3e-07
ref|XP_004499039.1| PREDICTED: long chain base biosynthesis prot... 60 3e-07
ref|XP_002867012.1| ATLCB1 [Arabidopsis lyrata subsp. lyrata] gi... 60 3e-07
dbj|BAH20117.1| AT4G36480 [Arabidopsis thaliana] 60 3e-07
emb|CAB16844.1| serine C-palmitoyltransferase like protein [Arab... 60 3e-07
>ref|NP_001048451.2| Os02g0806900 [Oryza sativa Japonica Group]
gi|75125967|sp|Q6K8E7.1|LCB1B_ORYSJ RecName: Full=Long
chain base biosynthesis protein 1b
gi|47497351|dbj|BAD19391.1| putative serine
palmitoyltransferase LCB1 subunit [Oryza sativa Japonica
Group] gi|215707260|dbj|BAG93720.1| unnamed protein
product [Oryza sativa Japonica Group]
gi|215740738|dbj|BAG97394.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222623881|gb|EEE58013.1| hypothetical protein
OsJ_08792 [Oryza sativa Japonica Group]
gi|255671334|dbj|BAF10365.2| Os02g0806900 [Oryza sativa
Japonica Group]
Length = 481
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL 117
LDKCRLPVGIR+FVSAGHTESDI KVSESL+RVA L
Sbjct: 444 LDKCRLPVGIRLFVSAGHTESDILKVSESLKRVAASVL 481
>gb|EAY87933.1| hypothetical protein OsI_09357 [Oryza sativa Indica Group]
Length = 481
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL 117
LDKCRLPVGIR+FVSAGHTESDI KVSESL+RVA L
Sbjct: 444 LDKCRLPVGIRLFVSAGHTESDILKVSESLKRVAASVL 481
>gb|AAK98692.1|AC069158_4 Putative serine palmitoyltransferase [Oryza sativa Japonica Group]
Length = 566
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL 117
LDKCRLPVGIR+FVSAGHTESDI KVSESL+RVA L
Sbjct: 529 LDKCRLPVGIRLFVSAGHTESDILKVSESLKRVAASVL 566
>ref|XP_006648080.1| PREDICTED: long chain base biosynthesis protein 1c-like [Oryza
brachyantha]
Length = 482
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL 117
LDKCRLPVGIR+FVSAGHTESDI KVS SL+RVA L
Sbjct: 444 LDKCRLPVGIRLFVSAGHTESDISKVSASLKRVAASLL 481
>ref|XP_006411997.1| hypothetical protein EUTSA_v10025064mg [Eutrema salsugineum]
gi|557113167|gb|ESQ53450.1| hypothetical protein
EUTSA_v10025064mg [Eutrema salsugineum]
Length = 482
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL*K 123
LDKCRLPVGI++FVSAGH++SD+ KVSESL+R+ATE L K
Sbjct: 442 LDKCRLPVGIKLFVSAGHSDSDLLKVSESLKRLATEILLK 481
>gb|EEE50683.1| hypothetical protein OsJ_30932 [Oryza sativa Japonica Group]
Length = 397
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGHTESDI KVS SL+RVA
Sbjct: 360 LDKCRLPVGIRLFVSAGHTESDIFKVSASLKRVA 393
>gb|EEC68106.1| hypothetical protein OsI_36008 [Oryza sativa Indica Group]
Length = 225
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGHTESDI KVS SL+RVA
Sbjct: 188 LDKCRLPVGIRLFVSAGHTESDIFKVSASLKRVA 221
>ref|NP_001064272.1| Os10g0189600 [Oryza sativa Japonica Group]
gi|122249231|sp|Q7G4P2.2|LCB1C_ORYSJ RecName: Full=Long
chain base biosynthesis protein 1c
gi|110288749|gb|AAP52538.2| aminotransferase, classes I
and II family protein, expressed [Oryza sativa Japonica
Group] gi|113638881|dbj|BAF26186.1| Os10g0189600 [Oryza
sativa Japonica Group]
Length = 482
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGHTESDI KVS SL+RVA
Sbjct: 445 LDKCRLPVGIRLFVSAGHTESDIFKVSASLKRVA 478
>gb|AAX95571.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 508
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGHTESDI KVS SL+RVA
Sbjct: 471 LDKCRLPVGIRLFVSAGHTESDIFKVSASLKRVA 504
>gb|AAX95555.1| expressed protein [Oryza sativa Japonica Group]
Length = 509
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGHTESDI KVS SL+RVA
Sbjct: 472 LDKCRLPVGIRLFVSAGHTESDIFKVSASLKRVA 505
>gb|AFK40647.1| unknown [Medicago truncatula]
Length = 480
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGH+ESD+ K SESL+RVA
Sbjct: 443 LDKCRLPVGIRLFVSAGHSESDVHKASESLKRVA 476
>ref|XP_003615764.1| Serine palmitoyltransferase [Medicago truncatula]
gi|355517099|gb|AES98722.1| Serine palmitoyltransferase
[Medicago truncatula]
Length = 479
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGH+ESD+ K SESL+RVA
Sbjct: 442 LDKCRLPVGIRLFVSAGHSESDVHKASESLKRVA 475
>gb|ACJ85561.1| unknown [Medicago truncatula] gi|388499306|gb|AFK37719.1| unknown
[Medicago truncatula]
Length = 480
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGH+ESD+ K SESL+RVA
Sbjct: 443 LDKCRLPVGIRLFVSAGHSESDVHKASESLKRVA 476
>gb|AFK45471.1| unknown [Lotus japonicus]
Length = 204
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVA 105
LDKCRLPVGIR+FVSAGH+ESD+ K SESL+RVA
Sbjct: 163 LDKCRLPVGIRLFVSAGHSESDLHKASESLKRVA 196
>gb|ACH61906.1| serine palmitoyltransferase long chain base subunit [Brassica rapa
subsp. chinensis] gi|197311352|gb|ACH61907.1| serine
palmitoyltransferase long chain base subunit [Brassica
rapa subsp. chinensis]
Length = 482
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL*K 123
LDKCRLPVGI++ VSAGH+ESD+ KVSESL+R+A+E L K
Sbjct: 442 LDKCRLPVGIKLLVSAGHSESDLVKVSESLKRLASELLLK 481
>ref|NP_568005.1| serine palmitoyltransferase [Arabidopsis thaliana]
gi|79326362|ref|NP_001031796.1| serine
palmitoyltransferase [Arabidopsis thaliana]
gi|75166171|sp|Q94IB8.1|LCB1_ARATH RecName: Full=Long
chain base biosynthesis protein 1; Short=AtLCB1;
AltName: Full=Protein EMBRYO DEFECTIVE 2779; AltName:
Full=Protein FUMONISIN B1 RESISTANT 11
gi|14488275|dbj|BAB60898.1| serine palmitoyltransferase
[Arabidopsis thaliana] gi|21539529|gb|AAM53317.1| serine
C-palmitoyltransferase like protein [Arabidopsis
thaliana] gi|23197846|gb|AAN15450.1| serine
C-palmitoyltransferase like protein [Arabidopsis
thaliana] gi|332661260|gb|AEE86660.1| serine
palmitoyltransferase [Arabidopsis thaliana]
gi|332661261|gb|AEE86661.1| serine palmitoyltransferase
[Arabidopsis thaliana]
Length = 482
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL*K 123
LDKCRLPVGI+++VSAGH+ESD+ K SESL+R+A+E L K
Sbjct: 442 LDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELLLK 481
>ref|XP_004499039.1| PREDICTED: long chain base biosynthesis protein 1-like [Cicer
arietinum]
Length = 484
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL 117
LDKCRLPVGIR+FVSAGH+ESD+ K SESL R+A L
Sbjct: 443 LDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 480
>ref|XP_002867012.1| ATLCB1 [Arabidopsis lyrata subsp. lyrata]
gi|297312848|gb|EFH43271.1| ATLCB1 [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL*K 123
LDKCRLPVGI+++VSAGH+ESD+ K SESL+R+A+E L K
Sbjct: 442 LDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELLLK 481
>dbj|BAH20117.1| AT4G36480 [Arabidopsis thaliana]
Length = 482
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL*K 123
LDKCRLPVGI+++VSAGH+ESD+ K SESL+R+A+E L K
Sbjct: 442 LDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELLLK 481
>emb|CAB16844.1| serine C-palmitoyltransferase like protein [Arabidopsis thaliana]
gi|7270596|emb|CAB80314.1| serine C-palmitoyltransferase
like protein [Arabidopsis thaliana]
Length = 475
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = +1
Query: 4 LDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL*K 123
LDKCRLPVGI+++VSAGH+ESD+ K SESL+R+A+E L K
Sbjct: 435 LDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELLLK 474