BLASTX nr result
ID: Zingiber23_contig00028041
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00028041 (319 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004981816.1| PREDICTED: pentatricopeptide repeat-containi... 101 9e-20 ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [S... 99 6e-19 ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18 tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea... 96 6e-18 ref|NP_001147435.1| methyltransferase small domain [Zea mays] gi... 95 8e-18 ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 94 2e-17 gb|EAY91821.1| hypothetical protein OsI_13463 [Oryza sativa Indi... 92 9e-17 gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group... 92 9e-17 ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13 ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12 ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citr... 78 1e-12 ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Popu... 77 3e-12 ref|XP_002328495.1| predicted protein [Populus trichocarpa] 77 3e-12 gb|EMJ09516.1| hypothetical protein PRUPE_ppa002960mg [Prunus pe... 75 1e-11 ref|XP_002531291.1| pentatricopeptide repeat-containing protein,... 74 2e-11 ref|NP_187126.1| pentatricopeptide repeat-containing protein [Ar... 72 6e-11 ref|XP_002884467.1| pentatricopeptide repeat-containing protein ... 71 2e-10 ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10 ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutr... 69 8e-10 ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Caps... 68 1e-09 >ref|XP_004981816.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial-like isoform X1 [Setaria italica] gi|514814078|ref|XP_004981817.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial-like isoform X2 [Setaria italica] Length = 603 Score = 101 bits (252), Expect = 9e-20 Identities = 58/98 (59%), Positives = 66/98 (67%), Gaps = 6/98 (6%) Frame = -3 Query: 287 LFTHFAPSPNLFIYNLMISAF------SSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 LF HF P PNLFIYNLMISA SS PR++ LY+SMLS+SV DE+TF Sbjct: 78 LFRHFTPRPNLFIYNLMISAAAARDSSSSSPRRAVALYRSMLSASVHPDEQTFLALLRSV 137 Query: 125 XXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGD 12 GRQ+HAHVVV G S VYL+NSL+KMYLDAGD Sbjct: 138 ERLSA-GRQVHAHVVVSGLHSRVYLRNSLIKMYLDAGD 174 >ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor] gi|241920330|gb|EER93474.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor] Length = 599 Score = 99.0 bits (245), Expect = 6e-19 Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 7/99 (7%) Frame = -3 Query: 287 LFTHFAPSPNLFIYNLMISAF-------SSFPRQSCDLYKSMLSSSVALDERTFXXXXXX 129 LF HF P PNL+IYNLM+SA SS P Q+ +Y+SML+SSV DE+TF Sbjct: 77 LFHHFTPRPNLYIYNLMLSASAASAARDSSSPPQAAAVYRSMLASSVLPDEQTFLALLRS 136 Query: 128 XXXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGD 12 GRQ+HAHVVV GF S VYL+NSL+KMY+DAGD Sbjct: 137 VERLSA-GRQVHAHVVVSGFHSRVYLRNSLIKMYIDAGD 174 >ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial-like [Brachypodium distachyon] Length = 601 Score = 96.7 bits (239), Expect = 3e-18 Identities = 52/96 (54%), Positives = 64/96 (66%) Frame = -3 Query: 296 AFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXXXXX 117 A LF HF PNL+ YNL++SA SS +S LYKSML+SS + DE+TF Sbjct: 74 ALLLFEHFTTRPNLYCYNLVLSALSSSQSRSVALYKSMLASSASPDEKTF-LSLLKSVGC 132 Query: 116 XLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGDA 9 G+Q+HAHV+V G S VYL+NSL+KMYLDAGDA Sbjct: 133 ASVGKQVHAHVLVNGLHSRVYLRNSLIKMYLDAGDA 168 >tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea mays] Length = 601 Score = 95.5 bits (236), Expect = 6e-18 Identities = 53/96 (55%), Positives = 64/96 (66%), Gaps = 4/96 (4%) Frame = -3 Query: 287 LFTHFAPSPNLFIYNLMISAF----SSFPRQSCDLYKSMLSSSVALDERTFXXXXXXXXX 120 LF HF P PNL+IYNLM+SA SS Q+ LY+SML+SSV D++TF Sbjct: 77 LFQHFTPRPNLYIYNLMLSAAAARDSSSSTQAAALYRSMLASSVLPDQQTFLALLRSVER 136 Query: 119 XXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGD 12 GRQ+HAHVVV G S VYL+NSL+KMY+DAGD Sbjct: 137 LSA-GRQVHAHVVVSGLHSRVYLRNSLIKMYIDAGD 171 >ref|NP_001147435.1| methyltransferase small domain [Zea mays] gi|195611352|gb|ACG27506.1| methyltransferase small domain [Zea mays] Length = 601 Score = 95.1 bits (235), Expect = 8e-18 Identities = 53/96 (55%), Positives = 64/96 (66%), Gaps = 4/96 (4%) Frame = -3 Query: 287 LFTHFAPSPNLFIYNLMISAF----SSFPRQSCDLYKSMLSSSVALDERTFXXXXXXXXX 120 LF HF P PNL+IYNLM+SA SS Q+ LY+SML+SSV D++TF Sbjct: 77 LFQHFTPRPNLYIYNLMLSAAAARDSSSSPQAAALYRSMLASSVLPDQQTFLALLRSVEH 136 Query: 119 XXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGD 12 GRQ+HAHVVV G S VYL+NSL+KMY+DAGD Sbjct: 137 LSA-GRQVHAHVVVSGLHSRVYLRNSLIKMYIDAGD 171 >ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g04750, mitochondrial-like [Oryza brachyantha] Length = 640 Score = 94.0 bits (232), Expect = 2e-17 Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 5/97 (5%) Frame = -3 Query: 287 LFTHFAPSPNLFIYNLMISAF----SSFPRQSCDLYKSMLSSSVALDERTFXXXXXXXXX 120 LF HF P PNL+IYNLM+SA SS P + LY+SML+SS++ DE+TF Sbjct: 75 LFEHFTPRPNLYIYNLMLSAAAAASSSSPGRPAALYRSMLASSISPDEQTFLSLLKSVDG 134 Query: 119 XXL-FGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGD 12 G+Q+HAHVVV G S VYL+NSL+KMYLDAG+ Sbjct: 135 ESRSVGKQVHAHVVVNGLHSRVYLRNSLIKMYLDAGN 171 >gb|EAY91821.1| hypothetical protein OsI_13463 [Oryza sativa Indica Group] Length = 468 Score = 91.7 bits (226), Expect = 9e-17 Identities = 53/101 (52%), Positives = 63/101 (62%), Gaps = 9/101 (8%) Frame = -3 Query: 287 LFTHFAPSPNLFIYNLMIS--------AFSSFPRQSCDLYKSMLSSSVALDERTFXXXXX 132 LF HF P PNL+IYNLM+S A SS R+ LY SML+SS+ DE+TF Sbjct: 78 LFEHFTPRPNLYIYNLMLSSAAAAAAAASSSPSRRPAALYMSMLASSIHPDEQTFLSLLK 137 Query: 131 XXXXXXL-FGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGD 12 G+Q+HAHVVV G S VYL+NSL+KMYLDAGD Sbjct: 138 SVDAERRSVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGD 178 >gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group] gi|40539031|gb|AAR87288.1| putative PPR repeat containing protein [Oryza sativa Japonica Group] gi|108711017|gb|ABF98812.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group] Length = 676 Score = 91.7 bits (226), Expect = 9e-17 Identities = 53/101 (52%), Positives = 63/101 (62%), Gaps = 9/101 (8%) Frame = -3 Query: 287 LFTHFAPSPNLFIYNLMIS--------AFSSFPRQSCDLYKSMLSSSVALDERTFXXXXX 132 LF HF P PNL+IYNLM+S A SS R+ LY SML+SS+ DE+TF Sbjct: 78 LFEHFTPRPNLYIYNLMLSSAAAAAAAASSSPSRRPAALYMSMLASSIHPDEQTFLSLLK 137 Query: 131 XXXXXXL-FGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAGD 12 G+Q+HAHVVV G S VYL+NSL+KMYLDAGD Sbjct: 138 SVDAERRSVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGD 178 >ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial-like [Fragaria vesca subsp. vesca] Length = 670 Score = 80.1 bits (196), Expect = 3e-13 Identities = 44/97 (45%), Positives = 54/97 (55%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L +A LF H+ P PNL+IYN MISA S QS LYKSML + D+ T Sbjct: 100 LDIAVLLFNHYTPCPNLYIYNCMISALSFSKSQSFGLYKSMLYDDIYPDKNTLLYLLRAS 159 Query: 125 XXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAG 15 +QIH H +V G S YLQNSL+KMY++ G Sbjct: 160 KNLSDV-KQIHCHAIVTGLLSQGYLQNSLIKMYMEKG 195 >ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial-like [Citrus sinensis] Length = 655 Score = 77.8 bits (190), Expect = 1e-12 Identities = 44/97 (45%), Positives = 55/97 (56%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L +A LFTHF P+PNL+IYN MISA S Q+ +Y S+L S + D+ T Sbjct: 81 LDMAILLFTHFTPNPNLYIYNTMISALSFSFGQAFPVYNSILRSCIWPDKHTLLYLLKAS 140 Query: 125 XXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAG 15 QIH H VV G S YLQNSLMK+Y++ G Sbjct: 141 NHISE-AMQIHCHAVVLGLVSYGYLQNSLMKIYIENG 176 >ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citrus clementina] gi|557535048|gb|ESR46166.1| hypothetical protein CICLE_v10000494mg [Citrus clementina] Length = 681 Score = 77.8 bits (190), Expect = 1e-12 Identities = 44/97 (45%), Positives = 55/97 (56%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L +A LFTHF P+PNL+IYN MISA S Q+ +Y S+L S + D+ T Sbjct: 81 LDMAILLFTHFTPNPNLYIYNTMISALSFSFGQAFPVYNSILRSCIWPDKHTLLYLLKAS 140 Query: 125 XXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAG 15 QIH H VV G S YLQNSLMK+Y++ G Sbjct: 141 NHISE-AMQIHCHAVVLGLVSYGYLQNSLMKIYIENG 176 >ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa] gi|550338164|gb|ERP60591.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa] Length = 648 Score = 76.6 bits (187), Expect = 3e-12 Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPR-QSCDLYKSMLSSSVALDERTFXXXXXX 129 L LA LF HF P+PNLFIYN +ISAFSS + +S LY +LSS D++T Sbjct: 84 LDLAITLFNHFTPNPNLFIYNTLISAFSSLKKIESFYLYNVLLSSGECPDKQTLLYLLQA 143 Query: 128 XXXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAG 15 +QIH +V G S YLQN+L+K+YL+ G Sbjct: 144 VNFISQV-KQIHCQAIVTGLFSFGYLQNTLIKVYLENG 180 >ref|XP_002328495.1| predicted protein [Populus trichocarpa] Length = 580 Score = 76.6 bits (187), Expect = 3e-12 Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPR-QSCDLYKSMLSSSVALDERTFXXXXXX 129 L LA LF HF P+PNLFIYN +ISAFSS + +S LY +LSS D++T Sbjct: 16 LDLAITLFNHFTPNPNLFIYNTLISAFSSLKKIESFYLYNVLLSSGECPDKQTLLYLLQA 75 Query: 128 XXXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAG 15 +QIH +V G S YLQN+L+K+YL+ G Sbjct: 76 VNFISQV-KQIHCQAIVTGLFSFGYLQNTLIKVYLENG 112 >gb|EMJ09516.1| hypothetical protein PRUPE_ppa002960mg [Prunus persica] Length = 617 Score = 74.7 bits (182), Expect = 1e-11 Identities = 40/97 (41%), Positives = 54/97 (55%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L +A LF H+ P+PNL+IYN MISA S Q +Y SML S + D+ T Sbjct: 81 LDMAILLFNHYTPNPNLYIYNSMISALSFSKSQPFAVYNSMLHSGICPDKHTLLYLLQAS 140 Query: 125 XXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAG 15 +Q+H+H VV G S YLQN+L K+Y++ G Sbjct: 141 TCVSE-AKQLHSHAVVTGLLSHGYLQNTLTKIYMEEG 176 >ref|XP_002531291.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223529124|gb|EEF31104.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 517 Score = 74.3 bits (181), Expect = 2e-11 Identities = 41/97 (42%), Positives = 55/97 (56%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L +A LF H+ P PNL+IYN MISA SS Q LY SMLS+ + D+ T Sbjct: 81 LDMALILFNHYTPYPNLYIYNTMISALSSATAQ--PLYNSMLSTGIGPDKHTLLYLLHSA 138 Query: 125 XXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLDAG 15 +Q+ H ++ G S+ YLQNSL+K+YL+ G Sbjct: 139 RHVSEV-KQVQCHAIILGLSTYRYLQNSLIKVYLENG 174 >ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g04750, mitochondrial; Flags: Precursor gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana] gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 661 Score = 72.4 bits (176), Expect = 6e-11 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 1/99 (1%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L LA LF +F P+PN+F+YN MISA SS + LY SM+ V+ D +TF Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKAS 143 Query: 125 XXXXLFGRQIHAHVVVCGFSSL-VYLQNSLMKMYLDAGD 12 +QIH H++V G SL YL NSL+K Y++ G+ Sbjct: 144 SFLSEV-KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN 181 >ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 657 Score = 70.9 bits (172), Expect = 2e-10 Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L LA LF F P+PN+F+YN MISA SS + LY SM+ V+ D +TF Sbjct: 83 LDLAKLLFLDFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRYRVSPDRQTFLHLMKAS 142 Query: 125 XXXXLFGRQIHAHVVVCGFSSL-VYLQNSLMKMYLDAG 15 +QIH H++V G SL YL NSL+K Y++ G Sbjct: 143 SFLSEV-KQIHCHIIVSGCLSLGNYLWNSLVKFYMELG 179 >ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial-like [Vitis vinifera] Length = 654 Score = 69.3 bits (168), Expect = 5e-10 Identities = 40/95 (42%), Positives = 50/95 (52%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 L +A LF H P PNL+IYN MISA S QS Y S+LSS + + TF Sbjct: 81 LDMAVLLFRHHTPHPNLYIYNTMISALSLSLNQSFAFYNSLLSSCIYPNRSTFLFLLQAS 140 Query: 125 XXXXLFGRQIHAHVVVCGFSSLVYLQNSLMKMYLD 21 QIH H ++ G YLQN+LMK+YL+ Sbjct: 141 KFLSQV-MQIHCHAIITGSFYYGYLQNTLMKIYLE 174 >ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutrema salsugineum] gi|557109301|gb|ESQ49608.1| hypothetical protein EUTSA_v10020244mg [Eutrema salsugineum] Length = 656 Score = 68.6 bits (166), Expect = 8e-10 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 + +A LF +F P+PN+F+YN MISA S + LY SM+ SV+ D +TF Sbjct: 79 IDMAKLLFLNFTPNPNVFVYNTMISALSCSKKDCFALYSSMIRQSVSPDRQTFLHLMKAS 138 Query: 125 XXXXLFGRQIHAHVVVCGFSSL-VYLQNSLMKMYLDAG 15 +QIH H++V G SL YL NSL+ +Y++ G Sbjct: 139 ILLSEV-KQIHCHIIVFGCLSLGNYLWNSLVMVYMELG 175 >ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Capsella rubella] gi|482568381|gb|EOA32570.1| hypothetical protein CARUB_v10015860mg [Capsella rubella] Length = 651 Score = 68.2 bits (165), Expect = 1e-09 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Frame = -3 Query: 305 LSLAFRLFTHFAPSPNLFIYNLMISAFSSFPRQSCDLYKSMLSSSVALDERTFXXXXXXX 126 + LA LF F P+PN+F+YN MISA S+ + LY S++ V+ D +TF Sbjct: 79 IDLAKLLFLKFTPNPNVFVYNTMISAVSTSKNECFGLYGSLIRHRVSPDRQTFLYLMKAS 138 Query: 125 XXXXLFGRQIHAHVVVCG-FSSLVYLQNSLMKMYLDAG 15 +QIH H++V G FS YL NSL+K+Y++ G Sbjct: 139 SFLSEV-KQIHCHIIVSGCFSLGNYLWNSLVKLYMELG 175