BLASTX nr result
ID: Zingiber23_contig00028006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028006
(296 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group] g... 72 6e-11
gb|EEE57968.1| hypothetical protein OsJ_08707 [Oryza sativa Japo... 72 6e-11
gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indi... 72 6e-11
dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana] 66 4e-09
gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabido... 66 4e-09
ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabi... 66 4e-09
ref|XP_006343657.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 66 6e-09
ref|XP_006401143.1| hypothetical protein EUTSA_v10012558mg [Eutr... 65 9e-09
ref|XP_004242587.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 65 9e-09
ref|XP_006655855.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 64 3e-08
ref|XP_006473993.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 62 8e-08
gb|EMT32099.1| Ubiquitin carboxyl-terminal hydrolase 23 [Aegilop... 62 8e-08
ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 62 8e-08
gb|EMS66597.1| Ubiquitin carboxyl-terminal hydrolase 23 [Triticu... 62 1e-07
ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826... 62 1e-07
ref|XP_004954214.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 61 2e-07
dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza s... 61 2e-07
ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group] g... 61 2e-07
dbj|BAD11338.1| BRI1-KD interacting protein 110 [Oryza sativa Ja... 61 2e-07
gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japo... 61 2e-07
>ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group]
gi|47497222|dbj|BAD19267.1| putative
hematopoietic-specific IL-2 deubiquitinating enzyme
[Oryza sativa Japonica Group]
gi|113537912|dbj|BAF10295.1| Os02g0795000 [Oryza sativa
Japonica Group]
Length = 1185
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 168 NMLMMGL-EISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
N+L GL EI+VPRWDD ++ + + R+ SIGYVLDEW+EEYDRGKRKK+RK
Sbjct: 1090 NLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRK 1146
>gb|EEE57968.1| hypothetical protein OsJ_08707 [Oryza sativa Japonica Group]
Length = 1142
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 168 NMLMMGL-EISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
N+L GL EI+VPRWDD ++ + + R+ SIGYVLDEW+EEYDRGKRKK+RK
Sbjct: 1047 NLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRK 1103
>gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indica Group]
Length = 1156
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 168 NMLMMGL-EISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
N+L GL EI+VPRWDD ++ + + R+ SIGYVLDEW+EEYDRGKRKK+RK
Sbjct: 1061 NLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRK 1117
>dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana]
Length = 829
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = -3
Query: 264 QLPIISSNPTEKSVNSRITFAGDQVRLQKDFTNMLMMGL-EISVPRWDDAKLHKLGQNGL 88
Q P+ SS+ +E S N++ + V LQK+ N+L G+ E V +WD+ ++ + G
Sbjct: 705 QQPVGSSDLSEASQNAKRK--RESVLLQKEAVNILTRGVPETVVAKWDE-EISASQKRGS 761
Query: 87 ESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+S ++SIGYV DEW+EEYDRGK+KK+R
Sbjct: 762 KSEGASSIGYVADEWDEEYDRGKKKKIR 789
>gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = -3
Query: 264 QLPIISSNPTEKSVNSRITFAGDQVRLQKDFTNMLMMGL-EISVPRWDDAKLHKLGQNGL 88
Q P+ SS+ +E S N++ + V LQK+ N+L G+ E V +WD+ ++ + G
Sbjct: 735 QQPVGSSDLSEASQNAKRK--RESVLLQKEAVNILTRGVPETVVAKWDE-EISASQKRGS 791
Query: 87 ESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+S ++SIGYV DEW+EEYDRGK+KK+R
Sbjct: 792 KSEGASSIGYVADEWDEEYDRGKKKKIR 819
>ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal
hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = -3
Query: 264 QLPIISSNPTEKSVNSRITFAGDQVRLQKDFTNMLMMGL-EISVPRWDDAKLHKLGQNGL 88
Q P+ SS+ +E S N++ + V LQK+ N+L G+ E V +WD+ ++ + G
Sbjct: 735 QQPVGSSDLSEASQNAKRK--RESVLLQKEAVNILTRGVPETVVAKWDE-EISASQKRGS 791
Query: 87 ESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+S ++SIGYV DEW+EEYDRGK+KK+R
Sbjct: 792 KSEGASSIGYVADEWDEEYDRGKKKKIR 819
>ref|XP_006343657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Solanum
tuberosum]
Length = 931
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = -3
Query: 192 VRLQKDFTNMLMMGLEISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRK 13
V +K NML GLE SV RWDD ++ L ++ +IGY+ DEW+EEYD GKR+
Sbjct: 829 VATRKGLLNMLTRGLESSVARWDDVEVRSLNGVEAQNGNCVTIGYIGDEWDEEYDTGKRR 888
Query: 12 KLR 4
K+R
Sbjct: 889 KIR 891
>ref|XP_006401143.1| hypothetical protein EUTSA_v10012558mg [Eutrema salsugineum]
gi|557102233|gb|ESQ42596.1| hypothetical protein
EUTSA_v10012558mg [Eutrema salsugineum]
Length = 1002
Score = 65.1 bits (157), Expect = 9e-09
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Frame = -3
Query: 291 NGKDVIFAPQLPIISSNPTEKSVNS---RITFAGDQVRLQKDFTNMLMMGL-EISVPRWD 124
NG + Q P+ SS+ +E S N+ R + +Q+ LQK+ +L GL E V +WD
Sbjct: 866 NGAVLASDQQHPLRSSDMSEASQNAKRKRESSKEEQILLQKEHVTILTRGLPETVVAKWD 925
Query: 123 D--AKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+ + K+G+ S T IGYV DEW+EEYDRGK+KK+R
Sbjct: 926 EEASASKKMGK-----SEGTRIGYVADEWDEEYDRGKKKKIR 962
>ref|XP_004242587.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Solanum
lycopersicum]
Length = 923
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = -3
Query: 192 VRLQKDFTNMLMMGLEISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRK 13
V +K NML GLE SV RWDD ++ L ++ +IGY+ DEW+EEYD GKR+
Sbjct: 821 VATRKGLLNMLTRGLESSVARWDDVEVRSLKGVEAQNGNCVTIGYIGDEWDEEYDTGKRR 880
Query: 12 KLR 4
K+R
Sbjct: 881 KIR 883
>ref|XP_006655855.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Oryza
brachyantha]
Length = 902
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = -3
Query: 147 EISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
E++VPRWDD + + S S SIGYVLDEW+EEYDRGK KK+R+
Sbjct: 813 EVTVPRWDDVAVPNTEARESKCSESKSIGYVLDEWDEEYDRGKAKKIRQ 861
>ref|XP_006473993.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Citrus
sinensis]
Length = 946
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Frame = -3
Query: 168 NMLMMGLE-ISVPRWDDAKLH--KLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
+ML GLE ++ RWD LH + NG ES SIGYVLD+W+EEYDRGKRKKLR+
Sbjct: 853 SMLTRGLEETTIARWDGIDLHPHNVESNGTES---VSIGYVLDDWDEEYDRGKRKKLRQ 908
>gb|EMT32099.1| Ubiquitin carboxyl-terminal hydrolase 23 [Aegilops tauschii]
Length = 968
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = -3
Query: 267 PQLPIISSNP---TEKSVNSRITFAGDQVRLQKDFTNMLMMGLEISVPRWDDAKLHKLGQ 97
P+L ISS + +V+++ A QV ++ + + E++VP WDD +
Sbjct: 839 PKLGSISSTDKAHSRNNVDAKRGAASQQVVIRTED-----LRAEVTVPCWDDVAVPNSET 893
Query: 96 NGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
+SS SIGYVLDEW+EEYDRGK KK+RK
Sbjct: 894 REYKSSGKKSIGYVLDEWDEEYDRGKAKKVRK 925
>ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
[Brachypodium distachyon]
Length = 1051
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -3
Query: 258 PIISSNPTEKSVNSRITFAGDQVRLQKDFTNMLMMGL-EISVPRWDDAKLHKLGQNGLES 82
P + ++PT+ I A R+ + F ++L GL EI+VPRW D + +
Sbjct: 931 PSLVADPTDS-----INCADANKRIPRHF-DLLTRGLSEITVPRWVDIDMPYTKTTEFQH 984
Query: 81 SRSTSIGYVLDEWNEEYDRGKRKKLRK 1
R+ SIGYVLD+W+EEYD G+RKK+R+
Sbjct: 985 MRTNSIGYVLDQWDEEYDHGRRKKVRR 1011
>gb|EMS66597.1| Ubiquitin carboxyl-terminal hydrolase 23 [Triticum urartu]
Length = 978
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = -3
Query: 147 EISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
E++VP WDD + + +SS SIGYVLDEW+EEYDRGK KK+RK
Sbjct: 887 EVTVPCWDDVAVPNSETSEYKSSGKKSIGYVLDEWDEEYDRGKAKKVRK 935
>ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826635 [Brachypodium
distachyon]
Length = 895
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 147 EISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
E++VP WDD + +SS SIGYVLDEW+EEYDRGK KK+RK
Sbjct: 805 EVTVPCWDDVGVRNTETGECKSSGRRSIGYVLDEWDEEYDRGKTKKVRK 853
>ref|XP_004954214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Setaria
italica]
Length = 1085
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = -3
Query: 168 NMLMMGLEISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLRK 1
N+L GL VP+WDD + ++ S STSIGYVLDE +EEYDRG+RKK+RK
Sbjct: 993 NLLTRGLR--VPQWDDDDMPNTKAAEMQHSSSTSIGYVLDERDEEYDRGRRKKVRK 1046
>dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = -3
Query: 180 KDFTNMLMMGLEISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+ FT + E++VP WDD + + S S SIGYVLDEW+EEYDRGK KK+R
Sbjct: 774 RHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKIR 832
>ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific
protease 23 [Oryza sativa Japonica Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa
Japonica Group]
Length = 899
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = -3
Query: 180 KDFTNMLMMGLEISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+ FT + E++VP WDD + + S S SIGYVLDEW+EEYDRGK KK+R
Sbjct: 799 RHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKIR 857
>dbj|BAD11338.1| BRI1-KD interacting protein 110 [Oryza sativa Japonica Group]
Length = 517
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = -3
Query: 180 KDFTNMLMMGLEISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+ FT + E++VP WDD + + S S SIGYVLDEW+EEYDRGK KK+R
Sbjct: 417 RHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKIR 475
>gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = -3
Query: 180 KDFTNMLMMGLEISVPRWDDAKLHKLGQNGLESSRSTSIGYVLDEWNEEYDRGKRKKLR 4
+ FT + E++VP WDD + + S S SIGYVLDEW+EEYDRGK KK+R
Sbjct: 840 RHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKIR 898