BLASTX nr result
ID: Zingiber23_contig00024875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00024875
(214 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826987.1| hypothetical protein AMTR_s00010p00207700 [A... 107 2e-21
ref|XP_004973401.1| PREDICTED: LOW QUALITY PROTEIN: probable tRN... 101 9e-20
ref|XP_003574461.1| PREDICTED: tRNA modification GTPase MnmE-lik... 100 2e-19
gb|EOY16078.1| TRNA modification GTPase [Theobroma cacao] 100 3e-19
ref|XP_002444316.1| hypothetical protein SORBIDRAFT_07g020060 [S... 100 3e-19
ref|XP_006472646.1| PREDICTED: probable tRNA modification GTPase... 99 4e-19
ref|XP_004299612.1| PREDICTED: tRNA modification GTPase MnmE-lik... 99 6e-19
ref|XP_002301037.2| hypothetical protein POPTR_0002s09320g [Popu... 99 8e-19
dbj|BAC98601.1| putative tRNA modification GTPase trmE [Oryza sa... 99 8e-19
ref|XP_002889172.1| hypothetical protein ARALYDRAFT_895691 [Arab... 98 1e-18
ref|XP_006390033.1| hypothetical protein EUTSA_v10018349mg [Eutr... 97 2e-18
ref|XP_006434032.1| hypothetical protein CICLE_v10003846mg [Citr... 97 2e-18
ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi... 97 3e-18
gb|ESW08216.1| hypothetical protein PHAVU_009G028600g [Phaseolus... 96 4e-18
gb|AFW62152.1| tRNA modification GTPase trmE [Zea mays] 96 4e-18
ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG3... 96 4e-18
gb|AAF17686.1|AC009243_13 F28K19.23 [Arabidopsis thaliana] 96 5e-18
ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago trun... 96 5e-18
ref|NP_177924.3| putative tRNA modification GTPase [Arabidopsis ... 96 5e-18
ref|XP_006578331.1| PREDICTED: probable tRNA modification GTPase... 96 6e-18
>ref|XP_006826987.1| hypothetical protein AMTR_s00010p00207700 [Amborella trichopoda]
gi|548831416|gb|ERM94224.1| hypothetical protein
AMTR_s00010p00207700 [Amborella trichopoda]
Length = 502
Score = 107 bits (266), Expect = 2e-21
Identities = 52/72 (72%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRK-AGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVP 177
IVRLSG AV +AGRVF PAR +K PF+W+P+SHFVEYG LDR+GN++DEVLAVP
Sbjct: 48 IVRLSGSSAVAIAGRVFTPARKKKNRSKGPFVWEPKSHFVEYGVVLDREGNIVDEVLAVP 107
Query: 178 MLAPRSYTREDV 213
MLAPRSYTREDV
Sbjct: 108 MLAPRSYTREDV 119
>ref|XP_004973401.1| PREDICTED: LOW QUALITY PROTEIN: probable tRNA modification GTPase
mnmE-like [Setaria italica]
Length = 544
Score = 101 bits (252), Expect = 9e-20
Identities = 54/71 (76%), Positives = 58/71 (81%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP AV VAGRVF PAR R+ +P W+PRSHFVEYG ALD G+VIDEVL VPM
Sbjct: 94 IVRLSGPDAVAVAGRVFRPAR-REPAQAP--WRPRSHFVEYGLALDADGSVIDEVLVVPM 150
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 151 LAPRSYTREDV 161
>ref|XP_003574461.1| PREDICTED: tRNA modification GTPase MnmE-like [Brachypodium
distachyon]
Length = 543
Score = 100 bits (250), Expect = 2e-19
Identities = 53/71 (74%), Positives = 55/71 (77%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
+VRLSG AV VAGRVF PAR P WKPRSHFVEYGFALD G+VIDEVL VPM
Sbjct: 95 VVRLSGADAVAVAGRVFRPARKE-----PEAWKPRSHFVEYGFALDGDGSVIDEVLVVPM 149
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 150 LAPRSYTREDV 160
>gb|EOY16078.1| TRNA modification GTPase [Theobroma cacao]
Length = 564
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/76 (65%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPF-----LWKPRSHFVEYGFALDRKGNVIDEV 165
IVRLSGP AVD+AGRVF PA+ +K F W+P SH VEYG LD +GNV+DEV
Sbjct: 108 IVRLSGPTAVDIAGRVFFPAKKKKKQEKSFDSGSASWRPTSHVVEYGVVLDSRGNVVDEV 167
Query: 166 LAVPMLAPRSYTREDV 213
LAVPMLAP+SYTREDV
Sbjct: 168 LAVPMLAPKSYTREDV 183
>ref|XP_002444316.1| hypothetical protein SORBIDRAFT_07g020060 [Sorghum bicolor]
gi|241940666|gb|EES13811.1| hypothetical protein
SORBIDRAFT_07g020060 [Sorghum bicolor]
Length = 548
Score = 99.8 bits (247), Expect = 3e-19
Identities = 52/71 (73%), Positives = 55/71 (77%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP AV VA RVF PA R+A W+PRSHFVEYG ALD G+VIDEVL VPM
Sbjct: 98 IVRLSGPDAVAVADRVFRPAGARRASAP---WQPRSHFVEYGLALDADGSVIDEVLVVPM 154
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 155 LAPRSYTREDV 165
>ref|XP_006472646.1| PREDICTED: probable tRNA modification GTPase MnmE-like isoform X2
[Citrus sinensis]
Length = 564
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/72 (69%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPF-LWKPRSHFVEYGFALDRKGNVIDEVLAVP 177
IVRLSGP AVD+ GRVF P + +K S W+P SH VEYG LDR GNV+DEVLAVP
Sbjct: 111 IVRLSGPMAVDIVGRVFKPVKKKKKKSSGSGSWRPTSHVVEYGVVLDRHGNVVDEVLAVP 170
Query: 178 MLAPRSYTREDV 213
MLAPRSYTREDV
Sbjct: 171 MLAPRSYTREDV 182
>ref|XP_004299612.1| PREDICTED: tRNA modification GTPase MnmE-like [Fragaria vesca
subsp. vesca]
Length = 563
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP AV V GRVF P+R + SP W+P SH VEYG LD GNV+DEVLAVPM
Sbjct: 112 IVRLSGPSAVAVVGRVFRPSRRKSKSKSP--WRPTSHVVEYGVVLDPNGNVVDEVLAVPM 169
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 170 LAPRSYTREDV 180
>ref|XP_002301037.2| hypothetical protein POPTR_0002s09320g [Populus trichocarpa]
gi|550344627|gb|EEE80310.2| hypothetical protein
POPTR_0002s09320g [Populus trichocarpa]
Length = 550
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP AV++A RVF P R +K G +WKP SH V+YG LD +GNV+DEVLAVPM
Sbjct: 98 IVRLSGPSAVEIAARVFKPMRKKKKKGF-CVWKPTSHVVDYGVVLDHQGNVVDEVLAVPM 156
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 157 LAPRSYTREDV 167
>dbj|BAC98601.1| putative tRNA modification GTPase trmE [Oryza sativa Japonica
Group]
Length = 552
Score = 98.6 bits (244), Expect = 8e-19
Identities = 53/71 (74%), Positives = 54/71 (76%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP A VAGRVF PAR P W+PRSHFVEYG ALDR G VIDEVL VPM
Sbjct: 104 IVRLSGPDAAAVAGRVFRPAR---RAAPP--WRPRSHFVEYGVALDRDGGVIDEVLVVPM 158
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 159 LAPRSYTREDV 169
>ref|XP_002889172.1| hypothetical protein ARALYDRAFT_895691 [Arabidopsis lyrata subsp.
lyrata] gi|297335013|gb|EFH65431.1| hypothetical protein
ARALYDRAFT_895691 [Arabidopsis lyrata subsp. lyrata]
Length = 560
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPF-LWKPRSHFVEYGFALDRKGNVIDEVLAVP 177
IVRLSGP+AV+VA RVF A+ RK S W+P+SHFVEYG +D GNV+DEVLAVP
Sbjct: 110 IVRLSGPKAVEVARRVFRSAKKRKKKDSDSDSWQPKSHFVEYGVVVDSHGNVVDEVLAVP 169
Query: 178 MLAPRSYTREDV 213
MLAPRSYTREDV
Sbjct: 170 MLAPRSYTREDV 181
>ref|XP_006390033.1| hypothetical protein EUTSA_v10018349mg [Eutrema salsugineum]
gi|557086467|gb|ESQ27319.1| hypothetical protein
EUTSA_v10018349mg [Eutrema salsugineum]
Length = 564
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRK-----AGGSPFLWKPRSHFVEYGFALDRKGNVIDEV 165
IVRLSGP+AV+VA RVF A+ R + W+P SHFVEYG +D KGNV+DEV
Sbjct: 109 IVRLSGPKAVEVARRVFRSAKKRMKKTSDCSADSYSWRPTSHFVEYGVVVDSKGNVVDEV 168
Query: 166 LAVPMLAPRSYTREDV 213
LAVPMLAPRSYTREDV
Sbjct: 169 LAVPMLAPRSYTREDV 184
>ref|XP_006434032.1| hypothetical protein CICLE_v10003846mg [Citrus clementina]
gi|557536154|gb|ESR47272.1| hypothetical protein
CICLE_v10003846mg [Citrus clementina]
Length = 564
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFL-WKPRSHFVEYGFALDRKGNVIDEVLAVP 177
IVRLSGP AVD+ GRVF P + +K S + W+P SH VEYG LDR G V+DEVLAVP
Sbjct: 111 IVRLSGPMAVDIVGRVFKPVKKKKKKSSGSVSWRPTSHVVEYGVVLDRHGIVVDEVLAVP 170
Query: 178 MLAPRSYTREDV 213
MLAPRSYTREDV
Sbjct: 171 MLAPRSYTREDV 182
>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
gi|302141924|emb|CBI19127.3| unnamed protein product
[Vitis vinifera]
Length = 571
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/74 (64%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPAR---GRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLA 171
IVRLSGP AV + RVF PAR G+ G W+P SH VEYG LD GNV+DEVLA
Sbjct: 116 IVRLSGPEAVAIVARVFRPARRNKGKTLGSGSGSWRPTSHVVEYGVVLDHHGNVVDEVLA 175
Query: 172 VPMLAPRSYTREDV 213
+PMLAPRSYTREDV
Sbjct: 176 IPMLAPRSYTREDV 189
>gb|ESW08216.1| hypothetical protein PHAVU_009G028600g [Phaseolus vulgaris]
Length = 503
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/71 (70%), Positives = 52/71 (73%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP AV +AGRVF PAR W+P SH VEYG LD GNVIDEVLAVPM
Sbjct: 98 IVRLSGPGAVSIAGRVFRPARNS--------WRPTSHVVEYGVVLDSDGNVIDEVLAVPM 149
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 150 LAPRSYTREDV 160
>gb|AFW62152.1| tRNA modification GTPase trmE [Zea mays]
Length = 545
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/71 (70%), Positives = 55/71 (77%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVR+SGP AV VA RVF PA R+A W+PRSHFVEYG ALD G+VIDEVL VPM
Sbjct: 95 IVRISGPDAVAVADRVFRPAGTRRASTP---WQPRSHFVEYGLALDADGSVIDEVLVVPM 151
Query: 181 LAPRSYTREDV 213
L+PRSYTREDV
Sbjct: 152 LSPRSYTREDV 162
>ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG35370.1| tRNA
modification GTPase trmE [Zea mays]
Length = 546
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/71 (70%), Positives = 55/71 (77%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVR+SGP AV VA RVF PA R+A W+PRSHFVEYG ALD G+VIDEVL VPM
Sbjct: 96 IVRISGPDAVAVADRVFRPAGTRRASTP---WQPRSHFVEYGLALDADGSVIDEVLVVPM 152
Query: 181 LAPRSYTREDV 213
L+PRSYTREDV
Sbjct: 153 LSPRSYTREDV 163
>gb|AAF17686.1|AC009243_13 F28K19.23 [Arabidopsis thaliana]
Length = 613
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/72 (68%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPF-LWKPRSHFVEYGFALDRKGNVIDEVLAVP 177
IVRLSGP+AV+VA RVF A+ K S W+P+SHFVEYG +D GNV+DEVLAVP
Sbjct: 146 IVRLSGPKAVEVARRVFRSAKKTKKKESDSDTWRPKSHFVEYGAVVDSNGNVVDEVLAVP 205
Query: 178 MLAPRSYTREDV 213
MLAPRSYTREDV
Sbjct: 206 MLAPRSYTREDV 217
>ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago truncatula]
gi|355504724|gb|AES85927.1| tRNA modification GTPase
mnmE [Medicago truncatula]
Length = 543
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/71 (67%), Positives = 52/71 (73%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP AV +AGRVF PAR W+P SH VEYG LD GNV+DEV+AVPM
Sbjct: 96 IVRLSGPHAVSIAGRVFRPARNT--------WRPTSHVVEYGVVLDSDGNVVDEVIAVPM 147
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 148 LAPRSYTREDV 158
>ref|NP_177924.3| putative tRNA modification GTPase [Arabidopsis thaliana]
gi|51536472|gb|AAU05474.1| At1g78010 [Arabidopsis
thaliana] gi|52421301|gb|AAU45220.1| At1g78010
[Arabidopsis thaliana] gi|332197936|gb|AEE36057.1|
putative tRNA modification GTPase [Arabidopsis thaliana]
Length = 560
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/72 (68%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPF-LWKPRSHFVEYGFALDRKGNVIDEVLAVP 177
IVRLSGP+AV+VA RVF A+ K S W+P+SHFVEYG +D GNV+DEVLAVP
Sbjct: 110 IVRLSGPKAVEVARRVFRSAKKTKKKESDSDTWRPKSHFVEYGAVVDSNGNVVDEVLAVP 169
Query: 178 MLAPRSYTREDV 213
MLAPRSYTREDV
Sbjct: 170 MLAPRSYTREDV 181
>ref|XP_006578331.1| PREDICTED: probable tRNA modification GTPase MnmE-like isoform X3
[Glycine max]
Length = 437
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/71 (70%), Positives = 52/71 (73%)
Frame = +1
Query: 1 IVRLSGPRAVDVAGRVFHPARGRKAGGSPFLWKPRSHFVEYGFALDRKGNVIDEVLAVPM 180
IVRLSGP AV +AGRVF PAR W+P SH VEYG LD GNVIDEVLAVPM
Sbjct: 101 IVRLSGPGAVSIAGRVFRPARKT--------WRPTSHVVEYGVVLDSDGNVIDEVLAVPM 152
Query: 181 LAPRSYTREDV 213
LAPRSYTREDV
Sbjct: 153 LAPRSYTREDV 163