BLASTX nr result

ID: Zingiber23_contig00024868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00024868
         (232 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004962921.1| PREDICTED: upstream activation factor subuni...    60   2e-07
gb|EMT15267.1| hypothetical protein F775_31925 [Aegilops tauschii]     60   3e-07
ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [S...    60   3e-07
ref|XP_006664582.1| PREDICTED: upstream activation factor subuni...    60   4e-07
emb|CBI22492.3| unnamed protein product [Vitis vinifera]               60   4e-07
gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indi...    60   4e-07
ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...    60   4e-07
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]    60   4e-07
ref|NP_001066846.1| Os12g0507500 [Oryza sativa Japonica Group] g...    60   4e-07
ref|XP_006847805.1| hypothetical protein AMTR_s00029p00035130 [A...    59   5e-07
ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea ma...    59   5e-07
gb|EMS50711.1| hypothetical protein TRIUR3_21019 [Triticum urartu]     59   9e-07
ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825...    58   1e-06
ref|XP_006366602.1| PREDICTED: uncharacterized protein LOC102593...    56   4e-06
ref|XP_006361626.1| PREDICTED: uncharacterized protein LOC102582...    56   4e-06
gb|EOX98412.1| SWIB/MDM2 domain superfamily protein [Theobroma c...    56   6e-06
ref|XP_006829241.1| hypothetical protein AMTR_s00001p00272500 [A...    55   7e-06
ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus c...    55   7e-06
ref|XP_004289737.1| PREDICTED: uncharacterized protein LOC101294...    55   1e-05

>ref|XP_004962921.1| PREDICTED: upstream activation factor subunit spp27-like [Setaria
           italica]
          Length = 149

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           D+K+IIVCD+KL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 113 DNKKIIVCDDKLKKIFGGRDRVGFLEISGLLNPHFPK 149


>gb|EMT15267.1| hypothetical protein F775_31925 [Aegilops tauschii]
          Length = 78

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 42  ENKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 78


>ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
           gi|241943937|gb|EES17082.1| hypothetical protein
           SORBIDRAFT_08g016260 [Sorghum bicolor]
          Length = 147

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           +DK+II+CD+KL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 111 NDKKIIICDDKLKKIFGGRDRVGFLEISGLLNPHFQK 147


>ref|XP_006664582.1| PREDICTED: upstream activation factor subunit UAF30-like [Oryza
           brachyantha]
          Length = 155

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 119 NNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 155


>emb|CBI22492.3| unnamed protein product [Vitis vinifera]
          Length = 68

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIF-GKDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IF GKDRVGFLEI+GL+NPHF K
Sbjct: 32  ENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 68


>gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indica Group]
           gi|222617148|gb|EEE53280.1| hypothetical protein
           OsJ_36231 [Oryza sativa Japonica Group]
          Length = 78

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 42  NNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 78


>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIF-GKDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IF GKDRVGFLEI+GL+NPHF K
Sbjct: 109 ENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 145


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIF-GKDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IF GKDRVGFLEI+GL+NPHF K
Sbjct: 109 ENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFLK 145


>ref|NP_001066846.1| Os12g0507500 [Oryza sativa Japonica Group]
           gi|113649353|dbj|BAF29865.1| Os12g0507500 [Oryza sativa
           Japonica Group]
          Length = 55

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 19  NNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 55


>ref|XP_006847805.1| hypothetical protein AMTR_s00029p00035130 [Amborella trichopoda]
           gi|548851110|gb|ERN09386.1| hypothetical protein
           AMTR_s00029p00035130 [Amborella trichopoda]
          Length = 130

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IFG +DRVGFLEISGL+NPHF K
Sbjct: 91  ENKKIIVCDEKLKTIFGGRDRVGFLEISGLINPHFLK 127


>ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea mays]
           gi|195619068|gb|ACG31364.1| hypothetical protein [Zea
           mays] gi|223975083|gb|ACN31729.1| unknown [Zea mays]
           gi|413942035|gb|AFW74684.1| hypothetical protein
           ZEAMMB73_000211 [Zea mays]
          Length = 143

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+II+CDEKL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 107 NNKKIIICDEKLKKIFGGRDRVGFLEISGLLNPHFQK 143


>gb|EMS50711.1| hypothetical protein TRIUR3_21019 [Triticum urartu]
          Length = 236

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IFG ++RVGFLEISGLLNPHF K
Sbjct: 200 ENKKIIVCDEKLKKIFGGRERVGFLEISGLLNPHFQK 236


>ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825851 [Brachypodium
           distachyon]
          Length = 153

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
 Frame = -3

Query: 227 DKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           +K+IIVCD+KL  IFG +DRVGFLEISGLLNPHF K
Sbjct: 118 NKKIIVCDDKLKKIFGGRDRVGFLEISGLLNPHFQK 153


>ref|XP_006366602.1| PREDICTED: uncharacterized protein LOC102593466 [Solanum tuberosum]
          Length = 137

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/37 (64%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           +DK++I+CD+KL  IFG +DRVGFLEI+GL++PHF K
Sbjct: 101 EDKKVIICDDKLKKIFGGRDRVGFLEIAGLISPHFLK 137


>ref|XP_006361626.1| PREDICTED: uncharacterized protein LOC102582026 [Solanum tuberosum]
          Length = 138

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/37 (64%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           +DK++I+CD+KL  IFG +DRVGFLEI+GL++PHF K
Sbjct: 102 EDKKVIICDDKLKKIFGGRDRVGFLEIAGLISPHFLK 138


>gb|EOX98412.1| SWIB/MDM2 domain superfamily protein [Theobroma cacao]
          Length = 136

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/35 (68%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHF 129
           ++KR+I+CDEKL  IFG KDRVGFLE++GL++PHF
Sbjct: 101 ENKRVIICDEKLKKIFGGKDRVGFLEVAGLISPHF 135


>ref|XP_006829241.1| hypothetical protein AMTR_s00001p00272500 [Amborella trichopoda]
           gi|548834220|gb|ERM96657.1| hypothetical protein
           AMTR_s00001p00272500 [Amborella trichopoda]
          Length = 129

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/37 (67%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+IIVCDEKL  IFG +DRVGFLE++ L+NPHF K
Sbjct: 93  ENKKIIVCDEKLKSIFGGRDRVGFLEVTKLINPHFAK 129


>ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223542031|gb|EEF43575.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 141

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/37 (64%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIFG-KDRVGFLEISGLLNPHFTK 123
           ++K+II+CDEKL  IFG +DRVGFLE++GL++PHF K
Sbjct: 105 ENKKIIICDEKLKKIFGGRDRVGFLEVAGLISPHFLK 141


>ref|XP_004289737.1| PREDICTED: uncharacterized protein LOC101294411 [Fragaria vesca
           subsp. vesca]
          Length = 144

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/35 (71%), Positives = 31/35 (88%), Gaps = 1/35 (2%)
 Frame = -3

Query: 230 DDKRIIVCDEKLHDIF-GKDRVGFLEISGLLNPHF 129
           ++KRIIVCD+KL  IF GKDRVGFLE++GL+ PHF
Sbjct: 109 ENKRIIVCDDKLKKIFAGKDRVGFLEVAGLITPHF 143


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