BLASTX nr result
ID: Zingiber23_contig00024603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00024603
(281 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 132 4e-29
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 129 5e-28
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 129 5e-28
gb|ABF94034.1| retrotransposon protein, putative, unclassified [... 127 2e-27
gb|AAY87197.1| reverse transcriptase [Ephedra distachya] 123 3e-26
gb|AAY87199.1| reverse transcriptase [Ephedra distachya] 123 3e-26
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc... 122 5e-26
gb|AAP12935.1| retrotransposon protein, putative, unclassified [... 122 5e-26
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 120 2e-25
gb|EEC81933.1| hypothetical protein OsI_25798 [Oryza sativa Indi... 119 5e-25
ref|NP_001059496.1| Os07g0434200 [Oryza sativa Japonica Group] g... 119 5e-25
gb|ABA96626.1| retrotransposon protein, putative, unclassified [... 117 1e-24
gb|ABA95283.1| retrotransposon protein, putative, unclassified, ... 117 1e-24
gb|EEC67008.1| hypothetical protein OsI_33720 [Oryza sativa Indi... 117 1e-24
emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group] gi|1... 117 1e-24
ref|NP_001068460.1| Os11g0682500 [Oryza sativa Japonica Group] g... 117 1e-24
gb|AAP53887.2| retrotransposon protein, putative, Ty1-copia subc... 117 1e-24
ref|NP_001068391.2| Os11g0656500 [Oryza sativa Japonica Group] g... 117 1e-24
gb|ABF99351.1| retrotransposon protein, putative, unclassified [... 117 1e-24
gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japoni... 117 1e-24
>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1339
Score = 132 bits (333), Expect = 4e-29
Identities = 63/93 (67%), Positives = 73/93 (78%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YVSQPEGF + ++H VY+L KALYGLRQAPRAWN RL+RS+ ELGF +C QE A
Sbjct: 988 LEEEVYVSQPEGFVEKGKEHLVYKLSKALYGLRQAPRAWNTRLDRSMKELGFSRCAQEQA 1047
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VYTRG G ++VGVYVDDLIVTG S I F
Sbjct: 1048 VYTRGTGSTGIIVGVYVDDLIVTGESPSDITAF 1080
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 129 bits (323), Expect = 5e-28
Identities = 62/93 (66%), Positives = 74/93 (79%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YV+QPEGF + ++H V RL KALYGLRQAPRAWN RL++ L ELGF +C QE A
Sbjct: 1033 LEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQA 1092
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VYTRG+G+A V+VGVYVDDLIVTG + I F
Sbjct: 1093 VYTRGKGQAGVIVGVYVDDLIVTGENPHEIAMF 1125
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 129 bits (323), Expect = 5e-28
Identities = 62/93 (66%), Positives = 74/93 (79%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YV+QPEGF + ++H V RL KALYGLRQAPRAWN RL++ L ELGF +C QE A
Sbjct: 1033 LEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQA 1092
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VYTRG+G+A V+VGVYVDDLIVTG + I F
Sbjct: 1093 VYTRGKGQAGVIVGVYVDDLIVTGENPQEIAMF 1125
>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1409
Score = 127 bits (319), Expect = 2e-27
Identities = 60/93 (64%), Positives = 72/93 (77%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YV+QPEGF ++H V +L KALYGLRQAPRAWN+RL+RSL ELGF +C QE A
Sbjct: 1015 LEEEVYVAQPEGFARSGKEHLVLKLHKALYGLRQAPRAWNIRLDRSLRELGFDRCTQEQA 1074
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VYTRG G ++VGVYVDDLIVTG + + F
Sbjct: 1075 VYTRGRGSDGIIVGVYVDDLIVTGENPSELKVF 1107
>gb|AAY87197.1| reverse transcriptase [Ephedra distachya]
Length = 142
Score = 123 bits (308), Expect = 3e-26
Identities = 57/82 (69%), Positives = 69/82 (84%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YVSQPEGF V+ ++HKVYRL KALYGLRQAPR WN+RL+RS+ LGF KC QE A
Sbjct: 57 LEEEVYVSQPEGFVVKAEEHKVYRLSKALYGLRQAPRTWNIRLDRSMKSLGFVKCSQEQA 116
Query: 100 VYTRGEGEASVLVGVYVDDLIV 35
VYTR E +++VGVYVDDL++
Sbjct: 117 VYTRSNEEETLIVGVYVDDLVI 138
>gb|AAY87199.1| reverse transcriptase [Ephedra distachya]
Length = 135
Score = 123 bits (308), Expect = 3e-26
Identities = 57/82 (69%), Positives = 69/82 (84%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YVSQPEGF V+ ++HKVYRL KALYGLRQAPR WN+RL+RS+ LGF KC QE A
Sbjct: 50 LEEEVYVSQPEGFVVKAEEHKVYRLSKALYGLRQAPRTWNIRLDRSMKSLGFVKCSQEQA 109
Query: 100 VYTRGEGEASVLVGVYVDDLIV 35
VYTR E +++VGVYVDDL++
Sbjct: 110 VYTRSNEEETLIVGVYVDDLVI 131
>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 122 bits (306), Expect = 5e-26
Identities = 59/93 (63%), Positives = 73/93 (78%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YV+Q EGF + Q+H V +L KALYGLRQAPRAWN+ L++SL ELGF +C QE A
Sbjct: 929 LEEEVYVAQLEGFIKKGQEHLVLKLSKALYGLRQAPRAWNICLDKSLKELGFMRCKQEQA 988
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VYTRG G +++VGVYVDDLIVTG + R+ F
Sbjct: 989 VYTRGRGAEAMIVGVYVDDLIVTGENPARVEAF 1021
>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1283
Score = 122 bits (306), Expect = 5e-26
Identities = 59/93 (63%), Positives = 73/93 (78%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
LEEE+YV+Q EGF + Q+H V +L KALYGLRQAPRAWN+ L++SL ELGF +C QE A
Sbjct: 918 LEEEVYVAQLEGFIKKGQEHLVLKLSKALYGLRQAPRAWNICLDKSLKELGFMRCKQEQA 977
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VYTRG G +++VGVYVDDLIVTG + R+ F
Sbjct: 978 VYTRGRGAEAMIVGVYVDDLIVTGENPARVEAF 1010
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 120 bits (301), Expect = 2e-25
Identities = 55/93 (59%), Positives = 74/93 (79%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV+QPEGFE + ++HKV++L KALYGLRQAPRAWN +L+R L L FKKC++E +
Sbjct: 838 LNEEVYVTQPEGFEKKGEEHKVFKLSKALYGLRQAPRAWNTKLDRVLKSLRFKKCMKESS 897
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VY R EG+ +++ +YVDDL VTG+ST I +F
Sbjct: 898 VYRREEGDKLLIIAIYVDDLFVTGNSTKIIKEF 930
>gb|EEC81933.1| hypothetical protein OsI_25798 [Oryza sativa Indica Group]
Length = 1104
Score = 119 bits (297), Expect = 5e-25
Identities = 57/93 (61%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV+QP GF V Q+HKV RL KALYGLRQAPRAW +L+ SL+ LGF + EHA
Sbjct: 710 LLEEVYVAQPPGFVVDGQEHKVLRLDKALYGLRQAPRAWYSKLDASLLSLGFHRSDSEHA 769
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VY RG GE ++VGVYVDDLI+TG + G + +F
Sbjct: 770 VYMRGTGEQRLVVGVYVDDLIITGGNPGELKQF 802
>ref|NP_001059496.1| Os07g0434200 [Oryza sativa Japonica Group]
gi|113611032|dbj|BAF21410.1| Os07g0434200, partial [Oryza
sativa Japonica Group]
Length = 1212
Score = 119 bits (297), Expect = 5e-25
Identities = 57/93 (61%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV+QP GF V Q+HKV RL KALYGLRQAPRAW +L+ SL+ LGF + EHA
Sbjct: 818 LLEEVYVAQPPGFVVDGQEHKVLRLDKALYGLRQAPRAWYSKLDASLLSLGFHRSDSEHA 877
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VY RG GE ++VGVYVDDLI+TG + G + +F
Sbjct: 878 VYMRGTGEQRLVVGVYVDDLIITGGNPGELKQF 910
>gb|ABA96626.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1629
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GFE+ Q++KVYRL KALYGLRQAPRAWN +L+ +L +LGFK+ EH
Sbjct: 1027 LIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAPRAWNTKLDCTLKKLGFKQSPLEHG 1086
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
+Y RG+G +LVGVYVDDL++ G +G I F
Sbjct: 1087 LYARGDGSGRLLVGVYVDDLVIVGGDSGMIKGF 1119
>gb|ABA95283.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|215767919|dbj|BAH00148.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 1369
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GFE+ Q++KVYRL KALYGLRQAPRAWN +L+ +L +LGFK+ EH
Sbjct: 981 LIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAPRAWNTKLDCTLKKLGFKQSPLEHG 1040
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
+Y RG+G +LVGVYVDDL++ G +G I F
Sbjct: 1041 LYARGDGSGRLLVGVYVDDLVIVGGDSGMIKGF 1073
>gb|EEC67008.1| hypothetical protein OsI_33720 [Oryza sativa Indica Group]
Length = 1068
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GFE+ Q++KVYRL KALYGLRQAPRAWN +L+ +L +LGFK+ EH
Sbjct: 680 LIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAPRAWNTKLDCTLKKLGFKQSPLEHG 739
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
+Y RG+G +LVGVYVDDL++ G +G I F
Sbjct: 740 LYARGDGSGRLLVGVYVDDLVIVGGDSGMIKGF 772
>emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group]
gi|116309095|emb|CAH66202.1| OSIGBa0148D14.8 [Oryza
sativa Indica Group]
Length = 1439
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GFE+ Q++KVYRL KALYGLRQAPRAWN +L+ +L +LGFK+ EH
Sbjct: 1041 LIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAPRAWNTKLDCTLKKLGFKQSPLEHG 1100
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
+Y RG+G +LVGVYVDDL++ G +G I F
Sbjct: 1101 LYARGDGSGRLLVGVYVDDLVIVGGDSGMIKGF 1133
>ref|NP_001068460.1| Os11g0682500 [Oryza sativa Japonica Group]
gi|113645682|dbj|BAF28823.1| Os11g0682500, partial [Oryza
sativa Japonica Group]
Length = 1457
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GFE+ Q++KVYRL KALYGLRQAPRAWN +L+ +L +LGFK+ EH
Sbjct: 1069 LIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAPRAWNTKLDCTLKKLGFKQSPLEHG 1128
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
+Y RG+G +LVGVYVDDL++ G +G I F
Sbjct: 1129 LYARGDGSGRLLVGVYVDDLVIVGGDSGMIKGF 1161
>gb|AAP53887.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GFE+ Q++KVYRL KALYGLRQAPRAWN +L+ +L +LGFK+ EH
Sbjct: 1237 LIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAPRAWNTKLDCTLKKLGFKQSPLEHG 1296
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
+Y RG+G +LVGVYVDDL++ G +G I F
Sbjct: 1297 LYARGDGSGRLLVGVYVDDLVIVGGDSGMIKGF 1329
>ref|NP_001068391.2| Os11g0656500 [Oryza sativa Japonica Group]
gi|108864629|gb|ABA95163.2| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|255680327|dbj|BAF28754.2| Os11g0656500 [Oryza
sativa Japonica Group]
Length = 1400
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GFE+ Q++KVYRL KALYGLRQAPRAWN +L+ +L +LGFK+ EH
Sbjct: 1007 LIEEVYVVQPPGFEIDGQENKVYRLDKALYGLRQAPRAWNTKLDCTLKKLGFKQSPLEHG 1066
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
+Y RG+G +LVGVYVDDL++ G +G I F
Sbjct: 1067 LYARGDGSGRLLVGVYVDDLVIVGGDSGMIKGF 1099
>gb|ABF99351.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1190
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GF V+ +H+V +L KALYGLRQAPR WN +L+ SL LGF++C EHA
Sbjct: 827 LTEEVYVVQPPGFVVEGHEHQVLKLDKALYGLRQAPRVWNAKLDTSLTSLGFRRCDFEHA 886
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VY +G+G +LVGVYVDDLI+TGS I++F
Sbjct: 887 VYAQGQGTHHLLVGVYVDDLIITGSDAVEIDRF 919
>gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1182
Score = 117 bits (294), Expect = 1e-24
Identities = 55/93 (59%), Positives = 70/93 (75%)
Frame = -2
Query: 280 LEEEIYVSQPEGFEVQNQKHKVYRLFKALYGLRQAPRAWNMRLNRSLVELGFKKCIQEHA 101
L EE+YV QP GF V+ +H+V +L KALYGLRQAPR WN +L+ SL LGF++C EHA
Sbjct: 819 LTEEVYVVQPPGFVVEGHEHQVLKLDKALYGLRQAPRVWNAKLDTSLTSLGFRRCDFEHA 878
Query: 100 VYTRGEGEASVLVGVYVDDLIVTGSSTGRINKF 2
VY +G+G +LVGVYVDDLI+TGS I++F
Sbjct: 879 VYAQGQGTHHLLVGVYVDDLIITGSDAVEIDRF 911