BLASTX nr result
ID: Zingiber23_contig00024560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00024560
(237 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002307488.1| chromosome condensation regulator family pro... 86 7e-15
gb|EMS61171.1| putative E3 ubiquitin-protein ligase HERC2 [Triti... 84 2e-14
gb|AAW78916.1| putative chromosome condensation factor [Triticum... 84 2e-14
gb|AAK84081.1|AF326781_2 putative chromosome condensation factor... 84 2e-14
gb|EOY16670.1| Regulator of chromosome condensation (RCC1) famil... 83 3e-14
gb|EOY16669.1| Regulator of chromosome condensation (RCC1) famil... 83 3e-14
gb|AFW83880.1| putative regulator of chromosome condensation (RC... 83 4e-14
ref|XP_006653059.1| PREDICTED: uncharacterized protein LOC102704... 82 6e-14
ref|XP_006472955.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 82 6e-14
ref|XP_006434432.1| hypothetical protein CICLE_v10000092mg [Citr... 82 6e-14
gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indi... 82 6e-14
emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group] 82 6e-14
ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group] g... 82 6e-14
ref|XP_002300931.1| chromosome condensation regulator family pro... 82 7e-14
ref|XP_006645349.1| PREDICTED: uncharacterized protein LOC102714... 82 1e-13
gb|EMT32708.1| Putative E3 ubiquitin-protein ligase HERC2 [Aegil... 82 1e-13
ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222... 82 1e-13
tpg|DAA36740.1| TPA: putative regulator of chromosome condensati... 82 1e-13
ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832... 82 1e-13
gb|ACN27174.1| unknown [Zea mays] 82 1e-13
>ref|XP_002307488.1| chromosome condensation regulator family protein [Populus
trichocarpa] gi|222856937|gb|EEE94484.1| chromosome
condensation regulator family protein [Populus
trichocarpa]
Length = 1061
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/79 (59%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Frame = +2
Query: 11 PRGNDAAPAF--RETVTPRGNDAPAAFRSSSTASV--DVEAEWIEQFEPGVYITLVTLRD 178
P GN + A +E +P+ D R SS + VEAEWIEQ+EPGVYITLV LRD
Sbjct: 939 PSGNSMSEAIDGKEPWSPQDGDNGMKSRDSSLVANGNQVEAEWIEQYEPGVYITLVALRD 998
Query: 179 GTRDLKRVRFSRRKFGEQQ 235
GTRDLKRVRFSRR+FGE Q
Sbjct: 999 GTRDLKRVRFSRRRFGEHQ 1017
>gb|EMS61171.1| putative E3 ubiquitin-protein ligase HERC2 [Triticum urartu]
Length = 1040
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +2
Query: 2 TATPRGNDAAPAFRETVTPRGNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDG 181
+A+ RG+D ++ G+D+ + S +S V+AEWIEQ+EPGVYITL TLRDG
Sbjct: 797 SASSRGDDNVSIDARSLQ-NGDDSYKPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDG 855
Query: 182 TRDLKRVRFSRRKFGEQQ 235
TRDLKRVRFSRR+FGE Q
Sbjct: 856 TRDLKRVRFSRRRFGEHQ 873
>gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +2
Query: 2 TATPRGNDAAPAFRETVTPRGNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDG 181
+A+ RG+D ++ G+D+ + S +S V+AEWIEQ+EPGVYITL TLRDG
Sbjct: 797 SASSRGDDNVSIDARSLQ-NGDDSYKPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDG 855
Query: 182 TRDLKRVRFSRRKFGEQQ 235
TRDLKRVRFSRR+FGE Q
Sbjct: 856 TRDLKRVRFSRRRFGEHQ 873
>gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +2
Query: 2 TATPRGNDAAPAFRETVTPRGNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDG 181
+A+ RG+D ++ G+D+ + S +S V+AEWIEQ+EPGVYITL TLRDG
Sbjct: 797 SASSRGDDNVSIDARSLQ-NGDDSYKPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDG 855
Query: 182 TRDLKRVRFSRRKFGEQQ 235
TRDLKRVRFSRR+FGE Q
Sbjct: 856 TRDLKRVRFSRRRFGEHQ 873
>gb|EOY16670.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain isoform 2 [Theobroma cacao]
Length = 1116
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = +2
Query: 17 GNDAAPAFRETVTPRGNDAPAAFRSSSTASV----DVEAEWIEQFEPGVYITLVTLRDGT 184
G++ + A E + D + +S ++A V VEAEWIEQ+EPGVYITLV LRDGT
Sbjct: 996 GSNVSEAVDEKESGSFGDGENSMKSRNSALVANGNQVEAEWIEQYEPGVYITLVALRDGT 1055
Query: 185 RDLKRVRFSRRKFGEQQ 235
RDLKRVRFSRR+FGE Q
Sbjct: 1056 RDLKRVRFSRRRFGEHQ 1072
>gb|EOY16669.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain isoform 1 [Theobroma cacao]
Length = 1115
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = +2
Query: 17 GNDAAPAFRETVTPRGNDAPAAFRSSSTASV----DVEAEWIEQFEPGVYITLVTLRDGT 184
G++ + A E + D + +S ++A V VEAEWIEQ+EPGVYITLV LRDGT
Sbjct: 995 GSNVSEAVDEKESGSFGDGENSMKSRNSALVANGNQVEAEWIEQYEPGVYITLVALRDGT 1054
Query: 185 RDLKRVRFSRRKFGEQQ 235
RDLKRVRFSRR+FGE Q
Sbjct: 1055 RDLKRVRFSRRRFGEHQ 1071
>gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2
Query: 2 TATPRGNDAAPAFRETVTPRGNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDG 181
+A+ R +D++ ++ G D + + S S V+AEWIEQ+EPGVYITL TLRDG
Sbjct: 802 SASSRADDSSSRDARSLL-NGEDGYKSRSAVSLPSNQVQAEWIEQYEPGVYITLTTLRDG 860
Query: 182 TRDLKRVRFSRRKFGEQQ 235
TRDLKRVRFSRR+FGE Q
Sbjct: 861 TRDLKRVRFSRRRFGEHQ 878
>ref|XP_006653059.1| PREDICTED: uncharacterized protein LOC102704416 [Oryza brachyantha]
Length = 1058
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +2
Query: 86 RSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
R SS+ S VEAEWIEQ+EPGVY+TLV+LRDGT++LKRVRFSRR+FGE Q
Sbjct: 979 RGSSSPSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQ 1028
>ref|XP_006472955.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Citrus sinensis]
Length = 1117
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2
Query: 95 STASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
S +S VEAEWIEQ+EPGVYITLV LRDGTRDLKRVRFSRR+FGE Q
Sbjct: 1027 SVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQ 1073
>ref|XP_006434432.1| hypothetical protein CICLE_v10000092mg [Citrus clementina]
gi|557536554|gb|ESR47672.1| hypothetical protein
CICLE_v10000092mg [Citrus clementina]
Length = 1117
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2
Query: 95 STASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
S +S VEAEWIEQ+EPGVYITLV LRDGTRDLKRVRFSRR+FGE Q
Sbjct: 1027 SVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQ 1073
>gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
Length = 1012
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +2
Query: 86 RSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
R SS+ S VEAEWIEQ+EPGVY+TLV+LRDGT++LKRVRFSRR+FGE Q
Sbjct: 933 RGSSSPSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQ 982
>emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +2
Query: 86 RSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
R SS+ S VEAEWIEQ+EPGVY+TLV+LRDGT++LKRVRFSRR+FGE Q
Sbjct: 1003 RGSSSPSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQ 1052
>ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa
Japonica Group] gi|113565896|dbj|BAF16239.1| Os04g0686200
[Oryza sativa Japonica Group] gi|222629813|gb|EEE61945.1|
hypothetical protein OsJ_16701 [Oryza sativa Japonica
Group]
Length = 1057
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +2
Query: 86 RSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
R SS+ S VEAEWIEQ+EPGVY+TLV+LRDGT++LKRVRFSRR+FGE Q
Sbjct: 978 RGSSSPSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQ 1027
>ref|XP_002300931.1| chromosome condensation regulator family protein [Populus
trichocarpa] gi|222842657|gb|EEE80204.1| chromosome
condensation regulator family protein [Populus
trichocarpa]
Length = 1114
Score = 82.0 bits (201), Expect = 7e-14
Identities = 44/71 (61%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = +2
Query: 29 APAFRETVTPRGNDAPAAFRSSSTASVD--VEAEWIEQFEPGVYITLVTLRDGTRDLKRV 202
A A +E +P+ + R SS + VEAEWIEQ+EPGVYITLV+LRDGTRDLKRV
Sbjct: 1000 AVAGKEPRSPQDGENGMKSRDSSLVANGNHVEAEWIEQYEPGVYITLVSLRDGTRDLKRV 1059
Query: 203 RFSRRKFGEQQ 235
RFSRR+FGE Q
Sbjct: 1060 RFSRRRFGEHQ 1070
>ref|XP_006645349.1| PREDICTED: uncharacterized protein LOC102714243 [Oryza brachyantha]
Length = 913
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +2
Query: 62 GNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
G D + S +S V+AEWIEQ+EPGVYITL TLRDGTRDLKRVRFSRR+FGE Q
Sbjct: 822 GEDGYKPRGTISLSSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQ 879
>gb|EMT32708.1| Putative E3 ubiquitin-protein ligase HERC2 [Aegilops tauschii]
Length = 948
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +2
Query: 62 GNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
G D + S +S V+AEWIEQ+EPGVYITL TLRDGTRDLKRVRFSRR+FGE Q
Sbjct: 804 GEDGYKPRGTISISSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQ 861
>ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED:
uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +2
Query: 62 GNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
G++ A S + VEAEWIEQ+EPGVYITLV LRDGTRDLKRVRFSRR+FGE Q
Sbjct: 1018 GDNNSKAKTSPLVNATQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQ 1075
>tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/50 (74%), Positives = 46/50 (92%)
Frame = +2
Query: 86 RSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
RSS++ S V+AEWIEQ+EPGVY+TLV+LRDGT++LKRVRFSRR+FGE Q
Sbjct: 977 RSSNSPSNQVDAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQ 1026
>ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +2
Query: 62 GNDAPAAFRSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
G D + S +S V+AEWIEQ+EPGVYITL TLRDGTRDLKRVRFSRR+FGE Q
Sbjct: 822 GEDGYRPRGTVSISSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQ 879
>gb|ACN27174.1| unknown [Zea mays]
Length = 178
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/50 (74%), Positives = 46/50 (92%)
Frame = +2
Query: 86 RSSSTASVDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRKFGEQQ 235
RSS++ S V+AEWIEQ+EPGVY+TLV+LRDGT++LKRVRFSRR+FGE Q
Sbjct: 99 RSSNSPSNQVDAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQ 148