BLASTX nr result
ID: Zingiber23_contig00024548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00024548
(520 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001047461.1| Os02g0621500 [Oryza sativa Japonica Group] g... 79 8e-13
gb|EEC73618.1| hypothetical protein OsI_08115 [Oryza sativa Indi... 79 8e-13
gb|EXC24196.1| E3 ubiquitin-protein ligase PRT1 [Morus notabilis] 75 1e-11
ref|XP_006647532.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 74 2e-11
ref|XP_003575380.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 73 3e-11
ref|XP_003575379.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 73 3e-11
ref|XP_006360357.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 72 1e-10
ref|XP_004247849.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 71 2e-10
gb|ESW12588.1| hypothetical protein PHAVU_008G125500g [Phaseolus... 70 2e-10
gb|EMT18664.1| E3 ubiquitin-protein ligase PRT1 [Aegilops tauschii] 69 5e-10
gb|EMS53997.1| E3 ubiquitin-protein ligase PRT1 [Triticum urartu] 69 5e-10
ref|XP_002454186.1| hypothetical protein SORBIDRAFT_04g026340 [S... 69 5e-10
ref|XP_006386869.1| hypothetical protein POPTR_0002s24340g, part... 68 1e-09
emb|CBI37313.3| unnamed protein product [Vitis vinifera] 68 1e-09
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 68 1e-09
gb|ABK94910.1| unknown [Populus trichocarpa] 68 1e-09
ref|XP_006857442.1| hypothetical protein AMTR_s00067p00170490 [A... 67 2e-09
gb|AFW72385.1| putative RING zinc finger domain superfamily prot... 67 2e-09
gb|AFW72384.1| putative RING zinc finger domain superfamily prot... 67 2e-09
dbj|BAJ99683.1| predicted protein [Hordeum vulgare subsp. vulgare] 66 4e-09
>ref|NP_001047461.1| Os02g0621500 [Oryza sativa Japonica Group]
gi|47847766|dbj|BAD21543.1| putative PRT1 protein [Oryza
sativa Japonica Group] gi|113536992|dbj|BAF09375.1|
Os02g0621500 [Oryza sativa Japonica Group]
gi|215767949|dbj|BAH00178.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222623262|gb|EEE57394.1| hypothetical protein
OsJ_07567 [Oryza sativa Japonica Group]
Length = 408
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E +GFDLCE CYNT SKLPGRFNQ HTP+H+ ELD S + LQ EI E
Sbjct: 319 ELIGFDLCEECYNTKSKLPGRFNQHHTPDHRMELDHSALFNRLMRLQGIHEEGPGEIIIE 378
Query: 340 G-FEADALSVADTEHDYRNHDDPGRDDFI 257
G F A V D+ +D G DD +
Sbjct: 379 GAFVAPDAVVHIIADDHEEIEDNGEDDHL 407
>gb|EEC73618.1| hypothetical protein OsI_08115 [Oryza sativa Indica Group]
Length = 408
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E +GFDLCE CYNT SKLPGRFNQ HTP+H+ ELD S + LQ EI E
Sbjct: 319 ELIGFDLCEECYNTESKLPGRFNQHHTPDHRMELDHSALFNRLMRLQGIHEEGPGEIIIE 378
Query: 340 G-FEADALSVADTEHDYRNHDDPGRDDFI 257
G F A V D+ +D G DD +
Sbjct: 379 GAFVAPDAVVHIIADDHEEIEDNGEDDHL 407
>gb|EXC24196.1| E3 ubiquitin-protein ligase PRT1 [Morus notabilis]
Length = 636
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFL 386
E +GFDLC CYNT+SKLPGRFNQ HTPEH+FEL +S T+ NI L
Sbjct: 510 EEIGFDLCGDCYNTSSKLPGRFNQRHTPEHRFELLKSNTIRNIML 554
>ref|XP_006647532.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Oryza
brachyantha]
Length = 397
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/86 (45%), Positives = 45/86 (52%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E +GFDLCE CYNT SKLPGRFNQ HTP+H+ ELD S L I LQ +
Sbjct: 309 ELIGFDLCEECYNTKSKLPGRFNQHHTPDHRMELDNSALLHRIMRLQGIHEEGPGGVIIG 368
Query: 340 GFEADALSVADTEHDYRNHDDPGRDD 263
F A V D +D G +D
Sbjct: 369 EFVAPGAVVHVIPDDLEELEDMGEED 394
>ref|XP_003575380.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform 2
[Brachypodium distachyon]
Length = 385
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E VGFDLC+ CYNT SKLPGRFNQ+HTP+H+ ELD + ++ QR IP E
Sbjct: 302 ELVGFDLCDECYNTRSKLPGRFNQQHTPDHRMELDNTALYGSVLRFQR--------IPEE 353
Query: 340 GFEAD 326
G A+
Sbjct: 354 GLIAE 358
>ref|XP_003575379.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform 1
[Brachypodium distachyon]
Length = 391
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E VGFDLC+ CYNT SKLPGRFNQ+HTP+H+ ELD + ++ QR IP E
Sbjct: 308 ELVGFDLCDECYNTRSKLPGRFNQQHTPDHRMELDNTALYGSVLRFQR--------IPEE 359
Query: 340 GFEAD 326
G A+
Sbjct: 360 GLIAE 364
>ref|XP_006360357.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Solanum
tuberosum]
Length = 442
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLL---QRTQANTTVEI 350
E +GFDLCE CY ++SKLPGRFNQ+HTPEH+FEL Q+ + N+ L +R + + + ++
Sbjct: 329 EKIGFDLCEGCYKSSSKLPGRFNQQHTPEHQFELIQALQVRNVVLRLQPERLEGDDS-DL 387
Query: 349 PPEGFEADALSVADTEHDYRNHDDPGRDD 263
E E +L + E D + P RDD
Sbjct: 388 QLEYGEPRSLELRPLEEDSSETNSP-RDD 415
>ref|XP_004247849.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Solanum
lycopersicum]
Length = 442
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E +GFDLCE CY ++SKLPGRFNQ+HTPEH+FEL Q+ + N+ L + PE
Sbjct: 329 EKIGFDLCEGCYKSSSKLPGRFNQQHTPEHQFELIQALQVRNVVL----------RVQPE 378
Query: 340 GFEAD 326
E D
Sbjct: 379 RLEGD 383
>gb|ESW12588.1| hypothetical protein PHAVU_008G125500g [Phaseolus vulgaris]
Length = 418
Score = 70.5 bits (171), Expect = 2e-10
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQ--ANTTVEIP 347
E +GFDLC CY T SKLPGRFNQ+HT EHKF+L+QS + NI L T +T++++
Sbjct: 330 EKMGFDLCGDCYATRSKLPGRFNQQHTSEHKFKLEQSNIMHNIMLRLATAQLGDTSIDLE 389
Query: 346 PEG---FEADALSVADTEHDYRNHDD 278
G +D ++ D D NH D
Sbjct: 390 SVGNLEIASDGPTLFDDAVD--NHSD 413
>gb|EMT18664.1| E3 ubiquitin-protein ligase PRT1 [Aegilops tauschii]
Length = 366
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E +GFDLC CY++TSKLPGRFNQ+HTP+H+ ELD S Q A ++ +
Sbjct: 281 EAIGFDLCGECYDSTSKLPGRFNQQHTPDHRMELDNSSLFDAFLRFQGIPAEGLQQLVQQ 340
Query: 340 ----GFEADALSVADTEHDYRNHDD 278
G VAD E NH+D
Sbjct: 341 MELIGAGGMVQLVADDEEMEDNHED 365
>gb|EMS53997.1| E3 ubiquitin-protein ligase PRT1 [Triticum urartu]
Length = 333
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E +GFDLC CY++TSKLPGRFNQ+HTP+H+ ELD S Q A ++ +
Sbjct: 248 EAIGFDLCGECYDSTSKLPGRFNQQHTPDHRMELDNSSLFDAFLRFQGIPAEGLQQLVQQ 307
Query: 340 ----GFEADALSVADTEHDYRNHDD 278
G VAD E NH+D
Sbjct: 308 MELIGAGGMVQLVADDEEMEDNHED 332
>ref|XP_002454186.1| hypothetical protein SORBIDRAFT_04g026340 [Sorghum bicolor]
gi|241934017|gb|EES07162.1| hypothetical protein
SORBIDRAFT_04g026340 [Sorghum bicolor]
Length = 246
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANI 392
E +GFDLCE CYN++SKLPGRFNQ HTP+H+ E+D S L I
Sbjct: 126 ELIGFDLCEACYNSSSKLPGRFNQRHTPDHRMEVDNSALLRGI 168
>ref|XP_006386869.1| hypothetical protein POPTR_0002s24340g, partial [Populus
trichocarpa] gi|550345729|gb|ERP64666.1| hypothetical
protein POPTR_0002s24340g, partial [Populus trichocarpa]
Length = 124
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFL 386
E +GFDLC CYNT SK PGRFNQ+HT EHKFEL +S + NI L
Sbjct: 16 EEIGFDLCGDCYNTCSKRPGRFNQQHTSEHKFELVKSNIIHNIML 60
>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFEL 419
E +GFDLC CYNT SKLPGRFNQ+HTPEHKFEL
Sbjct: 335 EKIGFDLCGDCYNTNSKLPGRFNQQHTPEHKFEL 368
>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
Length = 470
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFEL 419
E +GFDLC CYNT SKLPGRFNQ+HTPEHKFEL
Sbjct: 354 EKIGFDLCGDCYNTNSKLPGRFNQQHTPEHKFEL 387
>gb|ABK94910.1| unknown [Populus trichocarpa]
Length = 469
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFL 386
E +GFDLC CYNT SK PGRFNQ+HT EHKFEL +S + NI L
Sbjct: 361 EEIGFDLCGDCYNTCSKRPGRFNQQHTSEHKFELVKSNIIHNIML 405
>ref|XP_006857442.1| hypothetical protein AMTR_s00067p00170490 [Amborella trichopoda]
gi|548861535|gb|ERN18909.1| hypothetical protein
AMTR_s00067p00170490 [Amborella trichopoda]
Length = 456
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFL 386
E +GFDLC +CYNT SKLPGRFNQ+H PEH FEL R L +L
Sbjct: 348 EIIGFDLCGSCYNTNSKLPGRFNQQHRPEHLFELTPPRRLNGAYL 392
>gb|AFW72385.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANI 392
E +GFDLCE CYN++SKLPGRFNQ HTP H+ E+D S + I
Sbjct: 302 ELIGFDLCEACYNSSSKLPGRFNQRHTPNHRMEVDNSALVHRI 344
>gb|AFW72384.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 451
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANI 392
E +GFDLCE CYN++SKLPGRFNQ HTP H+ E+D S + I
Sbjct: 296 ELIGFDLCEACYNSSSKLPGRFNQRHTPNHRMEVDNSALVHRI 338
>dbj|BAJ99683.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -1
Query: 520 ETVGFDLCETCYNTTSKLPGRFNQEHTPEHKFELDQSRTLANIFLLQRTQANTTVEIPPE 341
E +GFDLC CY++TSKLPGRFNQ+HTP+H+ ELD + +L + FL R Q IP E
Sbjct: 333 EAIGFDLCGECYDSTSKLPGRFNQQHTPDHRMELDNT-SLFDAFL--RFQG-----IPAE 384
Query: 340 GFE 332
G +
Sbjct: 385 GLQ 387